Os03g0222600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Caleosin related family protein.
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Os03g0222600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Caleosin related family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 301.69 | 0.816 | 5.71 | -1.7 | 1.63 | -2 | -0.938 | -0.877 | -1.15 | 2.11 | 71.09 | 737 | 19.6 | 1.1 |
| 302.69 | 0.81 | 5.71 | -1.74 | 1.62 | -2 | -1.47 | -- | -1.16 | 2.04 | 71.25 | 736 | 19.6 | 1 |
| 302.41 | 0.81 | 5.7 | -1.63 | 1.65 | -1.98 | -- | -1.64 | -1.13 | 2.15 | 70.08 | 734 | 19.7 | 0.733 |
| 311.07 | 0.821 | 5.7 | -1.71 | 1.65 | -2.03 | -- | -- | -1.15 | 2.2 | 71 | 729 | 19.8 | 0.7 |
| 355.92 | 0.879 | 5.7 | -1.38 | -- | -1.24 | -- | -1.78 | -1.17 | -- | 66.01 | 1445 | 19.4 | 0.937 |
| 389.78 | 0.926 | 5.72 | -1.89 | 0.487 | -- | -1.94 | -- | -1.22 | 1.15 | -- | -- | -- | -- |
| 403.23 | 0.94 | 5.71 | -1.83 | 0.54 | -- | -- | -- | -1.21 | 2.62 | -- | -- | -- | -- |
| 357.18 | 0.88 | 5.68 | -1.59 | -- | -1.28 | -- | -- | -1.21 | -- | 67.94 | 1439 | 19.8 | 0.617 |
| 387.21 | 0.916 | 5.66 | -- | 1.49 | -2.03 | -- | -- | -0.976 | 2.16 | 73.03 | 749 | 19.8 | 0.533 |
| 420.26 | 0.958 | 5.71 | -1.8 | -- | -- | -- | -- | -1.2 | -- | -- | -- | -- | -- |
| 491.15 | 1.04 | 5.66 | -- | 0.504 | -- | -- | -- | -1.01 | 2.58 | -- | -- | -- | -- |
| 381.73 | 0.91 | 5.72 | -- | -- | -2.48 | -- | -- | -1.22 | -- | 20.59 | 47520 | 18.1 | 0.0637 |
| 506.05 | 1.05 | 5.66 | -- | -- | -- | -- | -- | -0.996 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 307.04 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 3 | 312.92 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 5 | 313.06 | humidity | 70 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 31 | 315.70 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 33 | 315.97 | humidity | 60 | 1440 | > th | dose dependent | rect. | 12 | 12 |
| 43 | 316.85 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 54 | 317.36 | humidity | 90 | 720 | < th | dose independent | rect. | 16 | 8 |
| 92 | 318.77 | humidity | 60 | 1440 | > th | dose dependent | sin | 18 | NA |
| 106 | 319.18 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 20 |
| 121 | 319.55 | humidity | 90 | 720 | < th | dose independent | rect. | 8 | 16 |
| 127 | 319.68 | temperature | 30 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 153 | 319.90 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 8 |
| 154 | 319.90 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 10 |
| 155 | 319.90 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 12 |
| 161 | 319.93 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 15 |
| 216 | 320.79 | humidity | 80 | 720 | > th | dose independent | rect. | 15 | 7 |
| 268 | 321.39 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 11 |
| 289 | 321.70 | humidity | 80 | 720 | < th | dose independent | rect. | 17 | 4 |
| 312 | 321.95 | humidity | 70 | 1440 | < th | dose independent | rect. | 12 | 20 |
| 355 | 322.36 | humidity | 70 | 1440 | < th | dose independent | rect. | 12 | 8 |
| 376 | 322.45 | humidity | 60 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 384 | 322.59 | humidity | 90 | 1440 | < th | dose dependent | sin | 16 | NA |
| 405 | 322.86 | humidity | 90 | 720 | > th | dose independent | rect. | 21 | 2 |
| 410 | 322.87 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 411 | 322.87 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 417 | 322.92 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 422 | 322.96 | humidity | 70 | 1440 | > th | dose independent | sin | 16 | NA |
| 423 | 322.96 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 429 | 323.01 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 461 | 323.27 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 521 | 323.82 | humidity | 80 | 1440 | > th | dose independent | sin | 20 | NA |
| 540 | 323.90 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 641 | 324.56 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 703 | 325.02 | humidity | 70 | 1440 | < th | dose independent | sin | 15 | NA |
| 799 | 325.65 | humidity | 80 | 1440 | < th | dose independent | sin | 21 | NA |
| 856 | 325.92 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 870 | 326.00 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 907 | 326.19 | temperature | 25 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 937 | 326.36 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 8 |
| 941 | 326.38 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 966 | 326.52 | humidity | 90 | 720 | < th | dose independent | sin | 18 | NA |
| 974 | 326.57 | temperature | 30 | 14400 | > th | dose dependent | rect. | 18 | 1 |