BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0510900 Os04g0510900|AK063625
(310 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0510900 Similar to Embryo-specific protein 1 (ATS1) 555 e-158
Os04g0511200 EFA27 for EF hand, abscisic acid, 27kD 315 3e-86
Os06g0254700 Caleosin related family protein 178 4e-45
Os02g0734600 Similar to EFA27 for EF hand, abscisic acid, 27kD 155 3e-38
Os02g0734500 120 2e-27
Os02g0734400 Caleosin related family protein 115 4e-26
Os06g0254300 Caleosin related family protein 109 2e-24
AK110656 105 3e-23
Os03g0222600 Caleosin related family protein 77 1e-14
>Os04g0510900 Similar to Embryo-specific protein 1 (ATS1)
Length = 310
Score = 555 bits (1431), Expect = e-158, Method: Compositional matrix adjust.
Identities = 274/310 (88%), Positives = 274/310 (88%)
Query: 1 PPLHVATATSRSHRSLKRLRALHRESSVFRSFGPRQAEAEGCRGQXXXXXXXXXXXXXXX 60
PPLHVATATSRSHRSLKRLRALHRESSVFRSFGPRQAEAEGCRGQ
Sbjct: 1 PPLHVATATSRSHRSLKRLRALHRESSVFRSFGPRQAEAEGCRGQRRPRPGATATAPAPK 60
Query: 61 XXXXXXXLTGGSGVEAKDSLTIVALQSPVTVERPVRGDLEEHVPKPYLARALAAPDIYXX 120
LTGGSGVEAKDSLTIVALQSPVTVERPVRGDLEEHVPKPYLARALAAPDIY
Sbjct: 61 PRARRGRLTGGSGVEAKDSLTIVALQSPVTVERPVRGDLEEHVPKPYLARALAAPDIYHP 120
Query: 121 XXXXXXXXXXXXLSVLQQHVAFFDRDDNGIIYPWETYEGCRALGFNMIMSFLIALVVNVS 180
LSVLQQHVAFFDRDDNGIIYPWETYEGCRALGFNMIMSFLIALVVNVS
Sbjct: 121 DGTTTDDHEHHHLSVLQQHVAFFDRDDNGIIYPWETYEGCRALGFNMIMSFLIALVVNVS 180
Query: 181 MSYPTLPGWLPSPFFPIYIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYARTSPDRL 240
MSYPTLPGWLPSPFFPIYIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYARTSPDRL
Sbjct: 181 MSYPTLPGWLPSPFFPIYIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYARTSPDRL 240
Query: 241 TYREVWQMTEGNREVLDLFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGSLFEYVA 300
TYREVWQMTEGNREVLDLFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGSLFEYVA
Sbjct: 241 TYREVWQMTEGNREVLDLFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGSLFEYVA 300
Query: 301 MQREQHAKMS 310
MQREQHAKMS
Sbjct: 301 MQREQHAKMS 310
>Os04g0511200 EFA27 for EF hand, abscisic acid, 27kD
Length = 244
Score = 315 bits (807), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 148/232 (63%), Positives = 181/232 (78%), Gaps = 3/232 (1%)
Query: 78 DSLTIVALQSPVTVERPVRGDLEEHVPKPYLARALAAPDIYXXXXXXXXXXXXXXLSVLQ 137
D+L+ VA ++PVT ERPVR DLE +PKPYLARAL APD+Y +SVLQ
Sbjct: 13 DALSSVAAEAPVTRERPVRADLEVQIPKPYLARALVAPDVYHPEGTEGRDHRQ--MSVLQ 70
Query: 138 QHVAFFDRDDNGIIYPWETYEGCRALGFNMIMSFLIALVVNVSMSYPTLPGWLPSPFFPI 197
QHVAFFD D +GI+YPWETY G R LGFN+I+SF +A+ +NV +SYPTLP W+PS FPI
Sbjct: 71 QHVAFFDLDGDGIVYPWETYGGLRELGFNVIVSFFLAIAINVGLSYPTLPSWIPSLLFPI 130
Query: 198 YIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYARTSPDRLTYREVWQMTEGNREVLD 257
+I NIHR+KHGSDS TYDNEGRFMPVNFE+IFSK ART+PD+LT+ ++W+MTEG R LD
Sbjct: 131 HIKNIHRAKHGSDSSTYDNEGRFMPVNFESIFSKNARTAPDKLTFGDIWRMTEGQRVALD 190
Query: 258 LFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGSLFEYVAMQ-REQHAK 308
L G A+K EW +LYVLA+DEEG+L +EA+RR +DGSLFE +A Q RE H K
Sbjct: 191 LLGRIASKGEWILLYVLAKDEEGFLRKEAVRRCFDGSLFESIAQQRREAHEK 242
>Os06g0254700 Caleosin related family protein
Length = 215
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 117/177 (66%), Gaps = 1/177 (0%)
Query: 133 LSVLQQHVAFFDRDDNGIIYPWETYEGCRALGFNMIMSFLIALVVNVSMSYPTLPGWLPS 192
L+ LQ+HVAFFDR+ +GIIYP ETY+G RA+G +++S + A+ +N + T+P +
Sbjct: 38 LTPLQKHVAFFDRNKDGIIYPSETYQGFRAIGAGVVLSAVGAVFINGGLGPKTIPENTKT 97
Query: 193 PF-FPIYIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYARTSPDRLTYREVWQMTEG 251
PIY+ NIH+ KHGSDSG YD GRF+P FE IF K+A T PD LT +E+ ++ +
Sbjct: 98 GLKLPIYVKNIHKGKHGSDSGVYDANGRFVPEKFEEIFKKHAHTRPDALTDKELKELLQS 157
Query: 252 NREVLDLFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGSLFEYVAMQREQHAK 308
NRE D GW EW +LY L +D++G+L ++ +R +YDGSLF + +++ K
Sbjct: 158 NREPKDFKGWLGGFTEWKVLYYLCKDKDGFLHKDTVRAVYDGSLFAKMEQEKQSAKK 214
>Os02g0734600 Similar to EFA27 for EF hand, abscisic acid, 27kD
Length = 373
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 111/171 (64%)
Query: 133 LSVLQQHVAFFDRDDNGIIYPWETYEGCRALGFNMIMSFLIALVVNVSMSYPTLPGWLPS 192
++ LQ+H AFFD+D +GI+ ETY+G RALG +S L A +N +S T P +
Sbjct: 196 VTALQKHAAFFDKDGDGIVSLSETYDGLRALGLGSGLSSLSAAFINGVLSPKTRPDNGTA 255
Query: 193 PFFPIYIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYARTSPDRLTYREVWQMTEGN 252
P IYI NI++ HGSDS YD+EGRF+ FE IF+K+A+T PD LT E+ ++ + N
Sbjct: 256 PRLSIYIENIYKGIHGSDSSAYDSEGRFVAEKFEEIFAKHAKTVPDALTSDEIDELLQAN 315
Query: 253 REVLDLFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGSLFEYVAMQR 303
R+ D GW AA EW ILY + +D++G L +EA+R +YDGSLF +A R
Sbjct: 316 RKPGDYTGWVAASSEWKILYKIGKDKDGLLRKEAVREVYDGSLFTKLAAAR 366
>Os02g0734500
Length = 182
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 93/173 (53%), Gaps = 15/173 (8%)
Query: 136 LQQHVAFFDRDDNGIIYPWETYEGCRALGFNMIMSFLIALVVNVSMSYPTLPGWLPSPFF 195
LQ+HVAFFD D +GII ETY G R LGF + + + A +N + T P +F
Sbjct: 22 LQKHVAFFDSDHDGIITFGETYRGLRTLGFGIFGATVSATFINGDIGPKTRPEDADGSWF 81
Query: 196 PIYIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYARTSPDRLTYREVWQMTEG---N 252
IY+ NIH+ HGSD+G +D+EGR +A+T PD LT E+ +M +
Sbjct: 82 SIYVQNIHKGIHGSDTGAFDSEGR------------HAKTVPDGLTSDELDEMLHAYADH 129
Query: 253 REVLDLFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGSLFEYVAMQREQ 305
E D GW A EW + A+D++ L ++ +R +YDGS F +A + +
Sbjct: 130 TEHKDSSGWLQAATEWRATFEAAKDKDDILRKDTVRAVYDGSFFSKLAKENDD 182
>Os02g0734400 Caleosin related family protein
Length = 173
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 73/110 (66%)
Query: 195 FPIYIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYARTSPDRLTYREVWQMTEGNRE 254
F IYI NIH+ HGSD+G +D+EGRF+ F+ IF+K+A+T PD LT E+ +M NRE
Sbjct: 57 FSIYIENIHKGVHGSDTGAFDSEGRFVNEKFDEIFTKHAKTVPDGLTAAELDEMLRANRE 116
Query: 255 VLDLFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGSLFEYVAMQRE 304
D GW A EW + L +D++G+L ++ +R +YDGS F VA +++
Sbjct: 117 PKDYKGWVGASTEWETTFKLGKDKDGFLRKDTVRTVYDGSFFSKVASKKK 166
>Os06g0254300 Caleosin related family protein
Length = 157
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 80/136 (58%), Gaps = 2/136 (1%)
Query: 175 LVVNVSMSYPTLPGWLPSPFFPIYIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYAR 234
++ + Y + P P IYI NI++ HGSD+G D +GRF+P FE IFSK+A+
Sbjct: 12 IIDQILFPYSNVQKDAPLPHLSIYIKNIYKGMHGSDTGALDAKGRFVPAKFEEIFSKHAK 71
Query: 235 TSPDRLTYREVWQMTEGNREVLDLFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGS 294
PD LT EV +M NR+ D W A EW ++Y LA D+ GY ++++R +YDGS
Sbjct: 72 NRPDALTSLEVKEMILANRDPDDPQSWAAPIQEWGLIYGLASDKNGYFHKDSVRGIYDGS 131
Query: 295 LFEYVAMQREQHAKMS 310
+F V ++ E+ + S
Sbjct: 132 VF--VKLEEERASSQS 145
>AK110656
Length = 162
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 175 LVVNVSMSYPTLP-------GWLPSPFFPIYIHNIHRSKHGSDSGTYDNEGRFMPVNFEN 227
L +N +MSYPTLP WLP P+ IY+ N+HRSKHGSD+ ++D G+F E
Sbjct: 4 LAINGAMSYPTLPRISKSLRNWLPDPYMRIYVANMHRSKHGSDTESFDRRGQFRQSQLEA 63
Query: 228 IFSKYA-RTSPDRLTYREVWQMTEGNREVLDLFGWFAAKLEWTILYVLARDEEGYLAREA 286
S+ + R D L+Y +V M R+V DLFG A LEW+ Y+L +GY+ ++
Sbjct: 64 ELSECSSRYGKDALSYGDVLAMFRERRDVFDLFGMTAFLLEWSATYMLIWPADGYMRKDD 123
Query: 287 IRRMYDGSLFEYVA 300
I +YDGSLF +A
Sbjct: 124 ILGVYDGSLFVVLA 137
>Os03g0222600 Caleosin related family protein
Length = 125
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 80 LTIVALQSPVTVERPVRGDLEEHVPKPYLARALAAPDIYXXXXXXXXXXXXXXLSVLQQH 139
L VA + VT ER + +L+E +PKPYLARALAA D +SVLQQH
Sbjct: 47 LETVAPHAAVTGERKLNPNLQEQLPKPYLARALAAVD--PSHPQGTRGRDARGMSVLQQH 104
Query: 140 VAFFDRDDNGIIYPWETYEG 159
AFFDR+ +GIIYPWET++G
Sbjct: 105 AAFFDRNGDGIIYPWETFQG 124
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.137 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,690,556
Number of extensions: 366488
Number of successful extensions: 872
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 865
Number of HSP's successfully gapped: 9
Length of query: 310
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 209
Effective length of database: 11,762,187
Effective search space: 2458297083
Effective search space used: 2458297083
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)