BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0501100 Os04g0501100|Os04g0501100
(412 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0501100 Similar to MRS2-5 634 0.0
Os06g0650800 Similar to MRS2-5 419 e-117
Os01g0869200 Mg2+ transporter protein, CorA-like family pro... 173 2e-43
Os01g0908500 Mg2+ transporter protein, CorA-like family pro... 170 1e-42
Os04g0430900 164 2e-40
Os10g0545000 Mg2+ transporter protein, CorA-like family pro... 160 1e-39
Os03g0742400 Similar to MRS2-7 131 8e-31
Os03g0137700 Mg2+ transporter protein, CorA-like family pro... 108 9e-24
>Os04g0501100 Similar to MRS2-5
Length = 412
Score = 634 bits (1634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/412 (80%), Positives = 330/412 (80%)
Query: 1 MDHDPKERLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDVHGLKXXXXXXXSWVRVD 60
MDHDPKERLLL IDVHGLK SWVRVD
Sbjct: 1 MDHDPKERLLLPPRAAAAAAANGPHRRAAPAAGGGGGGVAIDVHGLKRRGGGRRSWVRVD 60
Query: 61 AATGASEAVEVAKXXXXXXXXXXXXXXXXXXXXFVYPSAILGRERAVVCNLERIRCIITA 120
AATGASEAVEVAK FVYPSAILGRERAVVCNLERIRCIITA
Sbjct: 61 AATGASEAVEVAKPALMRRLDLPARDLRLLDPLFVYPSAILGRERAVVCNLERIRCIITA 120
Query: 121 DEALILRDPDVAGGGAETEEAVRRYVAELQRRLVDRADDLPFEFIALEVALEAACSFLDA 180
DEALILRDPDVAGGGAETEEAVRRYVAELQRRLVDRADDLPFEFIALEVALEAACSFLDA
Sbjct: 121 DEALILRDPDVAGGGAETEEAVRRYVAELQRRLVDRADDLPFEFIALEVALEAACSFLDA 180
Query: 181 QAVELEADAYPLLDELTTKISTLNLERVRRLKSKLVALTRRVQKVRDEIEQLMDDDGDMA 240
QAVELEADAYPLLDELTTKISTLNLERVRRLKSKLVALTRRVQKVRDEIEQLMDDDGDMA
Sbjct: 181 QAVELEADAYPLLDELTTKISTLNLERVRRLKSKLVALTRRVQKVRDEIEQLMDDDGDMA 240
Query: 241 EMYLTEKKRRMEASLLEEQAXXXXXXXXXXXXXXXXXXXXXXXXXXRRLEKELSFARSRH 300
EMYLTEKKRRMEASLLEEQA RRLEKELSFARSRH
Sbjct: 241 EMYLTEKKRRMEASLLEEQAFQGMGNSGFGSSFSAPVSPVSSPPASRRLEKELSFARSRH 300
Query: 301 DSFKSADSSQYSIEELEMLLEAYFVVIDYTLSKLTSDNVRNQLIQFELLLTTATFVVAIF 360
DSFKSADSSQYSIEELEMLLEAYFVVIDYTLSKLTSDNVRNQLIQFELLLTTATFVVAIF
Sbjct: 301 DSFKSADSSQYSIEELEMLLEAYFVVIDYTLSKLTSDNVRNQLIQFELLLTTATFVVAIF 360
Query: 361 GVVSGVFGMNFEVDLFNVPHAFEWTLVITGVCGLVIFCCFIWYFKKRRFFPL 412
GVVSGVFGMNFEVDLFNVPHAFEWTLVITGVCGLVIFCCFIWYFKKRRFFPL
Sbjct: 361 GVVSGVFGMNFEVDLFNVPHAFEWTLVITGVCGLVIFCCFIWYFKKRRFFPL 412
>Os06g0650800 Similar to MRS2-5
Length = 436
Score = 419 bits (1077), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/391 (58%), Positives = 265/391 (67%), Gaps = 28/391 (7%)
Query: 41 IDVHGLKXXXXXXXSWVRVDAATGASEAVEVAKXXXXXXXXXXXXXXXXXXXXFVYPSAI 100
+DV LK SW+RV+AAT + + +EV K FVYPS I
Sbjct: 55 LDVPNLKKRGGGTRSWIRVEAATASVQTLEVDKATMMRRCELPARDLRLLDPLFVYPSTI 114
Query: 101 LGRERAVVCNLERIRCIITADEALILRDPDVAGGGAETEEAVRRYVAELQRRLVDRA--D 158
LGRERA+V NLE+IRC+ITADE L+L D V +Y AELQRRL+ RA D
Sbjct: 115 LGRERAIVVNLEQIRCVITADEVLLLNSLD---------SYVLQYAAELQRRLLQRAEGD 165
Query: 159 DLPFEFIALEVALEAACSFLDAQAVELEADAYPLLDELTTKISTLNLERVRRLKSKLVAL 218
+LPFEF ALE+ALEAACSFLDAQA ELE +AYPLLDELT+KISTLNLERVRRLKS+LVAL
Sbjct: 166 ELPFEFRALELALEAACSFLDAQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVAL 225
Query: 219 TRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMEASLLEEQAXXXXXXXXXXXXXXXXXX 278
TRRVQKVRDEIEQLMDDDGDMAEMYL+EKK R EAS +Q+
Sbjct: 226 TRRVQKVRDEIEQLMDDDGDMAEMYLSEKKLRTEASFYGDQSMLGYNSVGDGTSFSAPVS 285
Query: 279 XXXXXXXXRRLEKELSFARSRHDSFKSADSSQY-SIEELEMLLEAYFVVIDYTLSKLTS- 336
R+LEK S RSRHDS KS+D++ I+ELEMLLEAYFVVID TL+KLTS
Sbjct: 286 PVSSPTESRKLEKAFSLCRSRHDSVKSSDNTATEHIQELEMLLEAYFVVIDSTLNKLTSL 345
Query: 337 ---------------DNVRNQLIQFELLLTTATFVVAIFGVVSGVFGMNFEVDLFNVPHA 381
DNVRNQLIQFELLLTTATFVVAIFGVV+G+FGMNFE +F++ +A
Sbjct: 346 KEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFETSVFSIQNA 405
Query: 382 FEWTLVITGVCGLVIFCCFIWYFKKRRFFPL 412
F+W L+ITGV G IFC F+W+FK +R PL
Sbjct: 406 FQWVLIITGVIGAFIFCGFLWFFKYKRLMPL 436
>Os01g0869200 Mg2+ transporter protein, CorA-like family protein
Length = 418
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 175/391 (44%), Gaps = 116/391 (29%)
Query: 96 YPSAILGRERAVVCNLERIRCIITADEALIL--------------------------RDP 129
YPS ILGR+RA+V L+ ++ IITA E L+ +P
Sbjct: 67 YPSTILGRDRAIVVRLQGVKAIITATEVLVPDHDDVLLASFLLDLRSRLSLPDAAPSTNP 126
Query: 130 DVAGGGAETEEAVRRYVAELQRRLVDRADDLPFEFIALEVALEAACSFLDAQAVELEADA 189
A G TE+ + V L A PFEF LEV LE AC L++Q LE +A
Sbjct: 127 AAADRGNGTEQGDQGSVPGLAISGAGNAKIPPFEFKVLEVCLEHACKDLESQTRSLEKEA 186
Query: 190 YPLLDELTTKISTLNLERVRRLKSKLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKR 249
YP LD+L +K+STLNL+ VR LKS++V L+ RVQK+RDE+E L+DDD DM+EMYLT K
Sbjct: 187 YPALDKLGSKVSTLNLDHVRNLKSRMVDLSGRVQKIRDELEHLLDDDMDMSEMYLTRK-- 244
Query: 250 RMEASLLEEQAXXXXXXXXXXXXXXXXXXXXXXXXXXRRLEKELSFARSRHDSFKSA--- 306
L Q LS + SR DS K A
Sbjct: 245 ------LSFQG--------------------------------LSGSLSRADSHKYASVD 266
Query: 307 ------------------DSSQY---SIEELEMLLEAYFVVIDYTLSKLTS--------- 336
+SS Y IEELEMLLEAYFV ID TL+ L
Sbjct: 267 HDDDREEEDHDDETESGRESSVYVKPDIEELEMLLEAYFVQIDGTLNTLYHIREYADDTE 326
Query: 337 -------DNVRNQLIQFELLLTTATFVVAIFGVVSGVFGMNFEVDLFNVPHAFE------ 383
D +NQL+Q ++LTTAT VV VV +FGMN +DL P E
Sbjct: 327 DYINIMLDEKQNQLLQMGVMLTTATVVVTAGIVVVSLFGMNIHIDLMKDPETPEMVRMSN 386
Query: 384 ---WTLVITGVCG-LVIFCCFIWYFKKRRFF 410
W V G + I+ I+ +K +
Sbjct: 387 MHFWETTFGTVAGCIAIYLLAIYAGRKSKIL 417
>Os01g0908500 Mg2+ transporter protein, CorA-like family protein
Length = 314
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/281 (39%), Positives = 148/281 (52%), Gaps = 60/281 (21%)
Query: 160 LPFEFIALEVALEAACSFLDAQAVELEADAYPLLDELTTKISTLNLERVRRLKSKLVALT 219
LPFEF ALEV LE+AC L+ + LE +AYP LDELT+KISTLNLERVR++KS+LVA++
Sbjct: 56 LPFEFRALEVCLESACRSLEEETSTLEQEAYPALDELTSKISTLNLERVRQIKSRLVAIS 115
Query: 220 RRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMEASLLEEQAXXXXXXXXXXXXXXXXXXX 279
RVQKVRDE+E L+DD+ DMAEMYLTEK R E S +
Sbjct: 116 GRVQKVRDELEHLLDDEMDMAEMYLTEKLTRQEISETSSRV------------------- 156
Query: 280 XXXXXXXRRLEKELSFARSRHDSFKS-ADSSQYS-------IEELEMLLEAYFVVIDYTL 331
++ R + ++S AD S + IEELEMLLEAYFV ID TL
Sbjct: 157 --------EVDDPSQLEVDRDEDYRSEADVSNGTFIGYKPHIEELEMLLEAYFVQIDGTL 208
Query: 332 SKLTS----------------DNVRNQLIQFELLLTTATFVVAIFGVVSGVFGMNFEVDL 375
+KL+ D+ +NQL+Q ++L+TAT V+ V G+FGMN + L
Sbjct: 209 NKLSHLREYVDDTEDYINIMLDDKQNQLLQMGVMLSTATVVITAGVAVVGLFGMNIGISL 268
Query: 376 FNVPHAFE---------WTLVITGVCGLVIFCCFIWYFKKR 407
+ P E W + + G + + KR
Sbjct: 269 YADPTNEEEKRASNMKFWETTLGTIAGCTVMYIVAMGWGKR 309
>Os04g0430900
Length = 434
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/357 (35%), Positives = 168/357 (47%), Gaps = 113/357 (31%)
Query: 100 ILGRERAVVCNLERIRCIITADEALIL--RDPDVAGGGAETEEAVRRYVAELQRRLV--- 154
I GR+RAVV NL+R R +ITA E L+ RDP AV V EL+ RL
Sbjct: 79 ITGRDRAVVVNLDRARAVITASEVLVPSPRDP-----------AVAPLVRELRARLALAA 127
Query: 155 ------------------------------------------------DRADDLPFEFIA 166
D+A LPFEF A
Sbjct: 128 SPTPAPSPSPPQHGMAVGMDGSISPSQASRGGEEAAGNGKDGEALGGGDKA--LPFEFRA 185
Query: 167 LEVALEAACSFLDAQAVELEADAYPLLDELTTKISTLNLERVRRLKSKLVALTRRVQKVR 226
LEV LE AC L+ + LE +AYP LDELT+K+STLNLERVR++KS+LVA++ +VQKVR
Sbjct: 186 LEVCLEFACKSLEHETCTLEKEAYPALDELTSKVSTLNLERVRQIKSRLVAISGKVQKVR 245
Query: 227 DEIEQLMDDDGDMAEMYLTEK----KRRM----EASLLEEQAXXXXXXXXXXXXXXXXXX 278
DE+E L+DDD DMA ++LTEK R EAS LE+ +
Sbjct: 246 DELEHLLDDDMDMAALHLTEKLAYQSSRFDIDKEASELEDHSSRDEEGV----------- 294
Query: 279 XXXXXXXXRRLEKELSFARSRHDSFKSADSSQYSIEELEMLLEAYFVVIDYTLSKLTS-- 336
+ ++ S + +ELE+LLE+YFV ID TL+ L++
Sbjct: 295 ------------EGGGGGDGDDETIAGGGSFSPNTDELEILLESYFVQIDGTLNSLSTLR 342
Query: 337 --------------DNVRNQLIQFELLLTTATFVVAIFGVVSGVFGMNFEVDLFNVP 379
D +NQL+Q +LL+T T V + V+GVFG+N + L++ P
Sbjct: 343 EYVEDTEDYINMMLDEKQNQLLQMGILLSTGTLVSSCAIAVTGVFGINVHISLYDSP 399
>Os10g0545000 Mg2+ transporter protein, CorA-like family protein
Length = 343
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 165/354 (46%), Gaps = 63/354 (17%)
Query: 102 GRERAVVCNLERIRCIITADEALILRDP---DV----------------------AGGGA 136
RE+A+V NLE IR I+TADE L+L DP DV GG
Sbjct: 6 AREKAMVINLEFIRAIVTADEILLL-DPLTIDVIPFVEQLTHHLPLKNLVCGNGQPGGDD 64
Query: 137 ETEEAVRRYVAELQR--RLVDRADDLPFEFIALEVALEAACSFLDAQAVELEADAYPLLD 194
E+ + ++ R +LPFEF LE+ALE CS D LE A P+L+
Sbjct: 65 HGEKHDDSHGDQVPRLNEATGAEHELPFEFQVLELALETVCSSFDVNVSGLERRATPVLE 124
Query: 195 ELTTKISTLNLERVRRLKSKLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMEAS 254
ELT +ST NL+RVR LKS L L VQKVRDEIE L+DD+ DMA +YLT K+
Sbjct: 125 ELTKNVSTRNLDRVRTLKSDLTRLLAHVQKVRDEIEHLLDDNEDMAHLYLTRKQ------ 178
Query: 255 LLEEQAXXXXXXXXXXXXXXXXXXXXXXXXXXRRLEKELSFARSRHDSFKSADSSQYSIE 314
L +Q RR +S A S H +E
Sbjct: 179 LQNQQVEALISSAASNSIVPGGTSLSRLNNSFRR---SVSIATSMH--------LDNDVE 227
Query: 315 ELEMLLEAYFVVIDYTLSKLTS----------------DNVRNQLIQFELLLTTATFVVA 358
+LEMLLEAYF+ +D +++ S DN RN+LIQ +L LT A+F +A
Sbjct: 228 DLEMLLEAYFMQLDGIRNRILSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFGIA 287
Query: 359 IFGVVSGVFGMNFEVDLFNVPH-AFEWTLVITGVCGLVIFC-CFIWYFKKRRFF 410
+ ++G F MN + L+++ +F W V G + C +WY + ++
Sbjct: 288 VNTFIAGAFAMNIQSKLYSIDDGSFFWPFVGGTSSGCFMICIVLLWYARWKKLL 341
>Os03g0742400 Similar to MRS2-7
Length = 249
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 132/259 (50%), Gaps = 43/259 (16%)
Query: 161 PFEFIALEVALEAACSFLDAQAVELEADAYPLLDELTTKISTLNLERVRRLKSKLVALTR 220
PFEF ALEV LEA CSFL A+ ELE+ AYP LDELT+KIS+ NL+RVR+LKS +TR
Sbjct: 2 PFEFRALEVTLEAICSFLGARTTELESAAYPALDELTSKISSRNLDRVRKLKS---GMTR 58
Query: 221 RVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMEASLLEEQAXXXXXXXXXXXXXXXXXXXX 280
+V+ ++L D +M R++ +
Sbjct: 59 LNARVQKVRDELEQLLDDDDDMADLYLSRKLAGAASPVSGSGGPNWFPASPTIGS----- 113
Query: 281 XXXXXXRRLEKELSFARSRHDSFKSADSSQYSIEELEMLLEAYFVVIDYTLSKLTS---- 336
+R+ S + ++ +EELEMLLEAYF+ ID TL+KLT+
Sbjct: 114 -------------KISRASRASAPTIHGNENDVEELEMLLEAYFMQIDGTLNKLTTLREY 160
Query: 337 ------------DNVRNQLIQFELLLTTATFVVAIFGVVSGVFGMNFEVDLF-NVPHAFE 383
DN RNQLIQ EL L++ T ++++ +V+G+FGMN N + F+
Sbjct: 161 IDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSLYSLVAGIFGMNIPYTWNDNHGYVFK 220
Query: 384 WTLVITGVCGLVIFCCFIW 402
W ++++G +FC F++
Sbjct: 221 WVVLVSG-----LFCAFMF 234
>Os03g0137700 Mg2+ transporter protein, CorA-like family protein
Length = 435
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 142/327 (43%), Gaps = 83/327 (25%)
Query: 99 AILGRERAVVCNLERIRCIITADEALILR----------------------DPDVAGGGA 136
+IL RE+A+V NLE +R I+TADE L+L D D
Sbjct: 106 SILAREKAMVINLEFVRAIVTADEVLVLEPLAQEVLPFVEKLRKHFPLKSLDVDDVSTHM 165
Query: 137 ETEEAVRRYVAELQRRLVDRAD-DLPFEFIALEVALEAACSFLDAQAVELEADAYPLLDE 195
TE ++ V+ A+ +LPFEF L+ ALEA C ++ +L A +LD+
Sbjct: 166 HTENQDGELAQDVSCYEVEGANHELPFEFQVLDFALEAVCLSYNSTISDLNRSAIAVLDD 225
Query: 196 LTTKISTLNLERVRRLKSKLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMEASL 255
L +ST NLERV LKS L L VQKVRDE+E ++DD+ MA + T +K + + L
Sbjct: 226 LMKSVSTRNLERVWSLKSSLTRLLASVQKVRDEVEHILDDNEAMAHL-CTARKTKGQKDL 284
Query: 256 LEEQAXXXXXXXXXXXXXXXXXXXXXXXXXXRRLEKELSFARSRHDSFKSADSSQYSIEE 315
L L E R+ H S +++ + +
Sbjct: 285 LNTI-----------------------------LFPETRLCRT-HSSIENSTGIRTCVPS 314
Query: 316 ------LEMLLEAYFVVIDYTLSK----------------LTSDNVRNQLIQFELLLTTA 353
L+MLLEAYF +D ++ + DN RN+L+ +L L A
Sbjct: 315 DSDAHILDMLLEAYFKQLDGIRNRIFLVRQYIVDTEDYISIQLDNKRNELLGLQLTLIIA 374
Query: 354 TFVVAIFGVVSGVFGMNFEVDLFNVPH 380
+F +AI ++ F M N+PH
Sbjct: 375 SFGIAINTFIAAAFAM-------NIPH 394
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.138 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,656,235
Number of extensions: 314467
Number of successful extensions: 1401
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 1387
Number of HSP's successfully gapped: 9
Length of query: 412
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 309
Effective length of database: 11,657,759
Effective search space: 3602247531
Effective search space used: 3602247531
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)