BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0481100 Os04g0481100|AK099817
(663 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0481100 Similar to Seed imbibition protein (Fragment) 1354 0.0
Os07g0209100 Similar to Seed imbibition protein (Fragment) 597 e-171
Os08g0495800 Raffinose synthase family protein 584 e-167
Os03g0808900 Similar to Seed imbibition protein (Fragment) 401 e-112
Os06g0172800 Raffinose synthase family protein 274 1e-73
Os01g0170000 Raffinose synthase family protein 248 1e-65
Os12g0555400 Similar to Raffinose synthase protein 86 9e-17
Os11g0435500 Raffinose synthase family protein 75 2e-13
>Os04g0481100 Similar to Seed imbibition protein (Fragment)
Length = 663
Score = 1354 bits (3504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/663 (98%), Positives = 651/663 (98%)
Query: 1 MIPTVGEDAAGVPAETQMLLLESRSEAGAALYALMLPVLDGGFRASLQGSPENELQFCFE 60
MIPTVGEDAAGVPAETQMLLLESRSEAGAALYALMLPVLDGGFRASLQGSPENELQFCFE
Sbjct: 1 MIPTVGEDAAGVPAETQMLLLESRSEAGAALYALMLPVLDGGFRASLQGSPENELQFCFE 60
Query: 61 SGDPEVQTLEAVDAVFINSGDNPFKLMKESIKMLSKIKGTFSHIEDKEIPANLDWFGWCT 120
SGDPEVQTLEAVDAVFINSGDNPFKLMKESIKMLSKIKGTFSHIEDKEIPANLDWFGWCT
Sbjct: 61 SGDPEVQTLEAVDAVFINSGDNPFKLMKESIKMLSKIKGTFSHIEDKEIPANLDWFGWCT 120
Query: 121 WDAFYKSVNPVGIEEGLKSLCEGGAPPRFLIIDDGWQETVNGFKEVDEAFIEQTVFAERL 180
WDAFYKSVNPVGIEEGLKSLCEGGAPPRFLIIDDGWQETVNGFKEVDEAFIEQTVFAERL
Sbjct: 121 WDAFYKSVNPVGIEEGLKSLCEGGAPPRFLIIDDGWQETVNGFKEVDEAFIEQTVFAERL 180
Query: 181 IDLTENDKFRGETCKNLGDHVKKIKEHYGVKYVYIWHALHGYWGGVLTTPDAMKKYNPQL 240
IDLTENDKFRGETCKNLGDHVKKIKEHYGVKYVYIWHALHGYWGGVLTTPDAMKKYNPQL
Sbjct: 181 IDLTENDKFRGETCKNLGDHVKKIKEHYGVKYVYIWHALHGYWGGVLTTPDAMKKYNPQL 240
Query: 241 VYPVQSPGNVANLRDIAMDSLEKFGVGIIDPAMIYDFYNDQHSYLXXXXXXXXXXXXQNV 300
VYPVQSPGNVANLRDIAMDSLEKFGVGIIDPAMIYDFYNDQHSYL QNV
Sbjct: 241 VYPVQSPGNVANLRDIAMDSLEKFGVGIIDPAMIYDFYNDQHSYLSSVGVDGVKVDVQNV 300
Query: 301 METLGKGFGGRVALTQKYQQALEESIARNFKGNNLICCMSHNTDSIFSSLKSAVARASED 360
METLGKGFGGRVALTQKYQQALEESIARNFKGNNLICCMSHNTDSIFSSLKSAVARASED
Sbjct: 301 METLGKGFGGRVALTQKYQQALEESIARNFKGNNLICCMSHNTDSIFSSLKSAVARASED 360
Query: 361 FMPREPTMQTLHIATVAFNSLLLGEIFIPDWDMFHSKHESAEFHGAARALSGGGVYVSDK 420
FMPREPTMQTLHIATVAFNSLLLGEIFIPDWDMFHSKHESAEFHGAARALSGGGVYVSDK
Sbjct: 361 FMPREPTMQTLHIATVAFNSLLLGEIFIPDWDMFHSKHESAEFHGAARALSGGGVYVSDK 420
Query: 421 PGMHDFSVLKKLVLPDGLILRTKHAGRPTRDCLFNDPVMDGKSLLKIWNLNKFSGVIGVF 480
PGMHDFSVLKKLVLPDGLILRTKHAGRPTRDCLFNDPVMDGKSLLKIWNLNKFSGVIGVF
Sbjct: 421 PGMHDFSVLKKLVLPDGLILRTKHAGRPTRDCLFNDPVMDGKSLLKIWNLNKFSGVIGVF 480
Query: 481 NCQGAGNWTYPVKENAHVPTTVCITGDLSPSDVELLEEIAGDDWNGETAVFAFNSCSLSR 540
NCQGAGNWTYPVKENAHVPTTVCITGDLSPSDVELLEEIAGDDWNGETAVFAFNSCSLSR
Sbjct: 481 NCQGAGNWTYPVKENAHVPTTVCITGDLSPSDVELLEEIAGDDWNGETAVFAFNSCSLSR 540
Query: 541 LQKHQTMEVSLSTMTCKIYTIALIKVFGGFVQFAPLGLVNMYNSGGALENVTSTGDCSEI 600
LQKHQTMEVSLSTMTCKIYTIALIKVFGGFVQFAPLGLVNMYNSGGALENVTSTGDCSEI
Sbjct: 541 LQKHQTMEVSLSTMTCKIYTIALIKVFGGFVQFAPLGLVNMYNSGGALENVTSTGDCSEI 600
Query: 601 TIQIQCRGPGRFGAYSATRPEICSVDEHEVEFKHTDDGFLAFDLSHGSSQDNLRNIEILY 660
TIQIQCRGPGRFGAYSATRPEICSVDEHEVEFKHTDDGFLAFDLSHGSSQDNLRNIEILY
Sbjct: 601 TIQIQCRGPGRFGAYSATRPEICSVDEHEVEFKHTDDGFLAFDLSHGSSQDNLRNIEILY 660
Query: 661 RAS 663
RAS
Sbjct: 661 RAS 663
>Os07g0209100 Similar to Seed imbibition protein (Fragment)
Length = 763
Score = 597 bits (1539), Expect = e-171, Method: Compositional matrix adjust.
Identities = 313/687 (45%), Positives = 431/687 (62%), Gaps = 33/687 (4%)
Query: 1 MIPTVGEDAAGVPAETQMLLLESRSEAGAA----------LYALMLPVLDGGFRASLQGS 50
M +G VP ETQ +L+E + A ++ +MLP+L+G FRA+LQG+
Sbjct: 79 MTQRMGSSGRDVPLETQFMLIEVPATAAGDGHDGGGDGEPVFVVMLPLLEGKFRAALQGN 138
Query: 51 PENELQFCFESGDPEVQTLEAVDAVFINSGDNPFKLMKESIKMLSKIKGTFSHIEDKEIP 110
++ELQ C ESGD VQT + V+ V+I++G NPF + ++IK + K TF H + K++P
Sbjct: 139 DDDELQICIESGDKAVQTEQGVNMVYIHAGTNPFDTITQAIKAVEKRMQTFHHRDKKKMP 198
Query: 111 ANLDWFGWCTWDAFYKSVNPVGIEEGLKSLCEGGAPPRFLIIDDGWQETVNGFKEVDE-- 168
+ LDWFGWCTWDAFY V G+++GL+SL GGAPPRFLIIDDGWQ+ + DE
Sbjct: 199 SFLDWFGWCTWDAFYTDVTADGVKQGLRSLANGGAPPRFLIIDDGWQQIGTEDDDTDEHP 258
Query: 169 --AFIEQTVFAERLIDLTENDKFR------GETCKNLGDHVKKIKEHYGVKYVYIWHALH 220
A E FA RL + EN KF+ GE L V+++K +GV+ VY+WHA+
Sbjct: 259 AVAVQEGAQFASRLTGIKENVKFQSKNGGAGEDTPGLRMLVEEVKGEHGVRQVYVWHAMA 318
Query: 221 GYWGGVLTTPDAMKKYNPQLVYPVQSPGNVANLRDIAMDSLEKFGVGIIDPAMIYDFYND 280
GYWGGV P AM++Y L YPVQSPG AN DI MDSL G+G++ P + DFY++
Sbjct: 319 GYWGGVAPAP-AMERYEAALAYPVQSPGVTANQPDIVMDSLSVLGLGLVHPRKVLDFYDE 377
Query: 281 QHSYLXXXXXXXXXXXXQNVMETLGKGFGGRVALTQKYQQALEESIARNFKGNNLICCMS 340
H+YL QN++ETLG G GGRVALT+ Y +ALE S+AR+F N I CM
Sbjct: 378 LHAYLASCGVDGVKVDVQNIIETLGAGHGGRVALTRAYNRALEASVARSFPDNGCISCMC 437
Query: 341 HNTDSIFSSLKSAVARASEDFMPREPTMQTLHIATVAFNSLLLGEIFIPDWDMFHSKHES 400
HNTD ++S+ ++AV RAS+DF PR+P T+H+A+VA+N++ LGE PDWDMFHS H +
Sbjct: 438 HNTDMLYSARQTAVVRASDDFYPRDPASHTIHVASVAYNTVFLGEFMQPDWDMFHSLHPA 497
Query: 401 AEFHGAARALSGGGVYVSDKPGMHDFSVLKKLVLPDGLILRTKHAGRPTRDCLFNDPVMD 460
AE+HGAARA+ G +YVSDKPG H+F +L+KLVLPDG +LR + GRPTRDCLF+DP D
Sbjct: 498 AEYHGAARAIGGCPIYVSDKPGNHNFDLLRKLVLPDGSVLRARLPGRPTRDCLFSDPARD 557
Query: 461 GKSLLKIWNLNKFSGVIGVFNCQGAGNWTYPVKENAHVPTTVCITGDLSPSDVELLEEIA 520
G+SLLKIWNLN GV+GVFNCQGAG K H +TG + DV+ + ++A
Sbjct: 558 GESLLKIWNLNNCGGVVGVFNCQGAGWCRVAKKTRVHDAAPGTLTGAVRADDVDAIAQVA 617
Query: 521 ---GDDWNGETAVFAFNSCSLSRLQKHQTMEVSLSTMTCKIYTIALIK-----VFGGFVQ 572
G W+GE V+A + L RL + + V+L + +++ + ++ G V
Sbjct: 618 GGDGGGWDGEAVVYAHRARELVRLPRGAALPVTLGALEYEVFHVCPVRAIAAAPGGAAVA 677
Query: 573 FAPLGLVNMYNSGGALENVTSTGDCSEITIQIQCRGPGRFGAYSATRPEICSVDEHEVEF 632
FAP+GL++M+N+GGA+E + + ++ RG GRFGAY + RP C++D +V F
Sbjct: 678 FAPVGLLDMFNAGGAVEECAVD---AAAAVALRVRGCGRFGAYFSRRPARCALDGADVGF 734
Query: 633 KHT-DDGFLAFDLSHGSSQDNLRNIEI 658
+ D G +A DL + N+EI
Sbjct: 735 TYDGDTGLVAVDLPVPEQEMYRWNLEI 761
>Os08g0495800 Raffinose synthase family protein
Length = 712
Score = 584 bits (1505), Expect = e-167, Method: Compositional matrix adjust.
Identities = 291/615 (47%), Positives = 390/615 (63%), Gaps = 19/615 (3%)
Query: 1 MIPTVGEDAAGVPAETQMLLLESRSEAG--------AALYALMLPVLDGGFRASLQGSPE 52
M +G +P ETQ LL+E+ G AA+Y + LP+L+G FRA LQG+ +
Sbjct: 79 MTQRMGTSGRDIPFETQFLLVEAADADGSHLAGDGAAAVYTVFLPILEGPFRAVLQGNSD 138
Query: 53 NELQFCFESGDPEVQTLEAVDAVFINSGDNPFKLMKESIKMLSKIKGTFSHIEDKEIPAN 112
+EL+ C ESGDP V++ E VF+ +G +PF+++ S+K + + TF+H E K++P
Sbjct: 139 DELEICLESGDPAVESFEGTHLVFVGAGSDPFEVITNSVKAVERHLQTFTHREKKKMPDM 198
Query: 113 LDWFGWCTWDAFYKSVNPVGIEEGLKSLCEGGAPPRFLIIDDGWQETVNGFKEVDEAFIE 172
L+WFGWCTWDAFY V G+ EGL+SL +GG P+F+IIDDGWQ +
Sbjct: 199 LNWFGWCTWDAFYTDVTSEGVMEGLQSLGKGGTGPKFVIIDDGWQSVSMDPAGIASLADN 258
Query: 173 QTVFAERLIDLTENDKF--------RGETCKN-LGDHVKKIKEHYGVKYVYIWHALHGYW 223
FA RL + EN KF R E N L V +IK + +KYVY+WHA+ GYW
Sbjct: 259 SANFANRLTHIKENHKFQLNGRKGHREENPANGLAHIVNEIKGKHQLKYVYVWHAITGYW 318
Query: 224 GGVLTTPDAMKKYNPQLVYPVQSPGNVANLRDIAMDSLEKFGVGIIDPAMIYDFYNDQHS 283
GGV D M+ Y ++ YPV SPG N A++S+ G+G+++P ++ FYN+ H+
Sbjct: 319 GGVRPGADGMEHYESKMQYPVSSPGVQKNEPCDALNSITTNGLGLVNPDRVFSFYNELHA 378
Query: 284 YLXXXXXXXXXXXXQNVMETLGKGFGGRVALTQKYQQALEESIARNFKGNNLICCMSHNT 343
YL QN++ETLG G GGRV L +KY QALE SIARNF+ N +ICCMSHNT
Sbjct: 379 YLASAGIDGVKVDVQNILETLGAGHGGRVLLARKYHQALEASIARNFRDNGIICCMSHNT 438
Query: 344 DSIFSSLKSAVARASEDFMPREPTMQTLHIATVAFNSLLLGEIFIPDWDMFHSKHESAEF 403
D+++SS +SAV RAS+DF PR+P T+HIA+VA+N++ LGE PDWDMFHS H AE+
Sbjct: 439 DNLYSSKRSAVVRASDDFWPRDPASHTIHIASVAYNTVFLGEFMQPDWDMFHSVHPMAEY 498
Query: 404 HGAARALSGGGVYVSDKPGMHDFSVLKKLVLPDGLILRTKHAGRPTRDCLFNDPVMDGKS 463
H AARA+ G +YVSDKPG HDF++LKKLVLPDG ILR K GRPTRDCLF+DP DGKS
Sbjct: 499 HAAARAVGGCAIYVSDKPGNHDFNLLKKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKS 558
Query: 464 LLKIWNLNKFSGVIGVFNCQGAGNWTYPVKEN-AHVPTTVCITGDLSPSDVELLEEIAGD 522
+LKIWNLN+ SGVIG FNCQGAG W K+N H +TG + DV L +A D
Sbjct: 559 ILKIWNLNEHSGVIGAFNCQGAG-WCRVGKKNLVHDEQPATVTGVIRAQDVHHLATVAAD 617
Query: 523 DWNGETAVFAFNSCSLSRLQKHQTMEVSLSTMTCKIYTIALIKVFGGFVQFAPLGLVNMY 582
WNG+ V++ ++ L K+ ++ V+L T +++T+ +K V FA +GL+ M+
Sbjct: 618 GWNGDVIVYSHIGGEVTCLPKNASLPVTLKTREYEVFTVVPLKKLDNGVSFAAVGLIGMF 677
Query: 583 NSGGALENVTSTGDC 597
NSGGA+ V D
Sbjct: 678 NSGGAVTAVRYVEDA 692
>Os03g0808900 Similar to Seed imbibition protein (Fragment)
Length = 505
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 192/412 (46%), Positives = 265/412 (64%), Gaps = 17/412 (4%)
Query: 1 MIPTVGEDAAGVPAETQMLLLESRSEAGA--ALYALMLPVLDGGFRASLQGSPENELQFC 58
M +G VP ETQ +LLESR G A+Y +MLP+L+G FRA+LQG+ +EL+ C
Sbjct: 79 MTQRMGTSGRDVPLETQFMLLESRDGGGGGEAVYVVMLPLLEGQFRAALQGNDRDELEIC 138
Query: 59 FESGDPEVQTLEAVDAVFINSGDNPFKLMKESIKMLSKIKGTFSHIEDKEIPANLDWFGW 118
ESGD VQT + V++++G NPF + +++K++ + TF H E K++P+ LDWFGW
Sbjct: 139 IESGDKAVQTAQGTYMVYVHAGANPFDTITQAVKVVERHLQTFHHREKKKLPSFLDWFGW 198
Query: 119 CTWDAFYKSVNPVGIEEGLKSLCEGGAPPRFLIIDDGWQETVNGFKE-VDEAFIEQTV-F 176
CTWDAFY V G+++GL+SL EGG PPRFLIIDDGWQ+ + KE A +++ F
Sbjct: 199 CTWDAFYTDVTADGVKQGLQSLAEGGTPPRFLIIDDGWQQIGSENKEDAGNAVVQEGAQF 258
Query: 177 AERLIDLTENDKFRGETCKNLGDH-------------VKKIKEHYGVKYVYIWHALHGYW 223
A RLI + EN KF+ T + D V++ K+ +GVKYVY+WHA+ GYW
Sbjct: 259 ASRLIGIKENTKFQKTTTTAMADGGETAASAAGLKALVEEAKKEHGVKYVYVWHAMAGYW 318
Query: 224 GGVLTTPDAMKKYNPQLVYPVQSPGNVANLRDIAMDSLEKFGVGIIDPAMIYDFYNDQHS 283
GGV + M+ Y + +PVQSPG + N DI MDSL G+G++ P M FY + H+
Sbjct: 319 GGVKPAAEGMEHYESAVAFPVQSPGVMGNQPDIVMDSLSVLGLGLVHPRMALAFYGELHA 378
Query: 284 YLXXXXXXXXXXXXQNVMETLGKGFGGRVALTQKYQQALEESIARNFKGNNLICCMSHNT 343
YL QN++ETLG G GGRV+LT+ + +ALE S+AR+F N I CM HNT
Sbjct: 379 YLASCGVDGVKVDAQNIIETLGAGHGGRVSLTRAFHRALEASVARSFPDNGCISCMCHNT 438
Query: 344 DSIFSSLKSAVARASEDFMPREPTMQTLHIATVAFNSLLLGEIFIPDWDMFH 395
D ++S+ ++AV RAS+DF P +P T+HI++VA+N+L LGE PDWDMFH
Sbjct: 439 DMLYSARQTAVVRASDDFYPLDPASHTIHISSVAYNTLFLGEFMQPDWDMFH 490
>Os06g0172800 Raffinose synthase family protein
Length = 451
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 211/360 (58%), Gaps = 14/360 (3%)
Query: 1 MIPTVGEDAAGVPAETQMLLLESRSEAGAAL----YALMLPVLDGGFRASLQG--SPENE 54
M +GE VP ETQ LL+ES++ Y + LP+++G FRASLQG + +E
Sbjct: 79 MAQRMGEKGGDVPHETQFLLVESKAGVDGGGGDASYLVFLPLVEGAFRASLQGGGAGGDE 138
Query: 55 LQFCFESGDPEVQTLEAVDAVFINSGD-NPFKLMKESIKMLSKIKGTFSHIEDKEIPANL 113
LQ C ESGD + A+F+ + D +PF + ++ TF +K++P +
Sbjct: 139 LQLCVESGDAGTRAASFDRALFVGAADSDPFAAIAGAVAAAKSCLKTFRIRAEKKLPGIV 198
Query: 114 DWFGWCTWDAFYKSVNPVGIEEGLKSLCEGGAPPRFLIIDDGWQETVNGFKEVDE----A 169
D+FGWCTWDAFY+ V G+E GL+SL GGAPP+F+IIDDGWQ + D+ A
Sbjct: 199 DYFGWCTWDAFYQDVTQEGVEAGLRSLTAGGAPPKFVIIDDGWQSVGTDHQNPDDTGADA 258
Query: 170 FIEQTVFAERLIDLTENDKFRG--ETCKNLGDHVKKIKEHYGVKYVYIWHALHGYWGGVL 227
+Q + A RL + EN KF+ + + V+ KE YG+KYVY+WHA+ GYWGGV
Sbjct: 259 KDKQPLLA-RLTGIKENSKFQDGDDPAAGIKTVVRAAKEKYGLKYVYVWHAITGYWGGVR 317
Query: 228 TTPDAMKKYNPQLVYPVQSPGNVANLRDIAMDSLEKFGVGIIDPAMIYDFYNDQHSYLXX 287
M+ Y+ + +P SPG V N + D L G+G++ P +Y FY++ H+YL
Sbjct: 318 PGVAGMEGYHSNMQFPNVSPGVVENEPGMKTDVLTTQGLGLVHPRAVYRFYDELHAYLAA 377
Query: 288 XXXXXXXXXXQNVMETLGKGFGGRVALTQKYQQALEESIARNFKGNNLICCMSHNTDSIF 347
Q ++ETLG G GGRV+LT+++ QAL+ SIA+NF N +I CMSH+TD+++
Sbjct: 378 AGVDGVKVDVQCILETLGAGHGGRVSLTRQFHQALDASIAKNFPENGIIACMSHHTDALY 437
>Os01g0170000 Raffinose synthase family protein
Length = 338
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 194/343 (56%), Gaps = 18/343 (5%)
Query: 331 KGNNLICCMSHNTDSIFSSLKS-AVARASEDFMPREPT--------MQTLHIATVAFNSL 381
GN +I M H D + ++ A+ R +DF +P+ +Q H+ A+NSL
Sbjct: 1 NGNGVIASMEHCNDFMLLGTEAVALGRVGDDFWCTDPSGDPDGTFWLQGCHMVHCAYNSL 60
Query: 382 LLGEIFIPDWDMFHSKHESAEFHGAARALSGGGVYVSDKPGMHDFSVLKKLVLPDGLILR 441
+G PDWDMF S H A FH A+RA+SGG VYVSD G HDF +L++L LPDG ILR
Sbjct: 61 WMGAFIHPDWDMFQSTHPCAAFHAASRAVSGGPVYVSDAVGCHDFDLLRRLALPDGTILR 120
Query: 442 TKHAGRPTRDCLFNDPVMDGKSLLKIWNLNKFSGVIGVFNCQGAGNWTYPVKEN-AHVPT 500
+ PTRDCLF DP+ DGK++LKIWN+NKFSGV+G FNCQG G W+ + N
Sbjct: 121 CERYALPTRDCLFADPLHDGKTMLKIWNVNKFSGVLGAFNCQG-GGWSREARRNMCAAGF 179
Query: 501 TVCITGDLSPSDVELLEEIAGDDWNGETAVFAFNSCSLSRLQKHQTMEVSLSTMTCKIYT 560
+V +T SP+DVE G D AV+ + L L++ +++E++L T ++
Sbjct: 180 SVPVTARASPADVEWSHGGGGGD---RFAVYFVEARKLQLLRRDESVELTLEPFTYELLV 236
Query: 561 IALIKVFGG---FVQFAPLGLVNMYNSGGALENVTSTGDCSEITIQIQCRGPGRFGAYSA 617
+A ++ + FAP+GL NM N+GGA++ + ++ ++ +G G AYS+
Sbjct: 237 VAPVRAIVSPELGIGFAPIGLANMLNAGGAVQGFEAARKDGDVAAEVAVKGAGEMVAYSS 296
Query: 618 TRPEICSVDEHEVEFKHTDDGFLAFDLSHGSSQDNLRNIEILY 660
RP +C V+ + EFK+ +DG + D+ S L +E Y
Sbjct: 297 ARPRLCKVNGQDAEFKY-EDGIVTVDVPWTGSSKKLSRVEYFY 338
>Os12g0555400 Similar to Raffinose synthase protein
Length = 198
Score = 85.9 bits (211), Expect = 9e-17, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 52/76 (68%)
Query: 386 IFIPDWDMFHSKHESAEFHGAARALSGGGVYVSDKPGMHDFSVLKKLVLPDGLILRTKHA 445
+ I D +F S H +A++H AA A+ G +YVSDKPG H+ +L+KLVLP G LR +
Sbjct: 51 VAISDPFLFQSLHPAAKYHDAAMAIGGCPIYVSDKPGNHNLELLRKLVLPSGSGLRVRLP 110
Query: 446 GRPTRDCLFNDPVMDG 461
GRPTR+CLF+D DG
Sbjct: 111 GRPTRECLFSDQARDG 126
>Os11g0435500 Raffinose synthase family protein
Length = 95
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 395 HSKHESAEFHGAARALSGGGVYVSDKPGMHDFSVLKKLVLPDGLILRTK 443
S H AE+H AARA+SG +YVSDKPG HDF++LKKLVLPDG ILR K
Sbjct: 1 QSVHPMAEYHAAARAVSGCAIYVSDKPGNHDFNLLKKLVLPDGSILRAK 49
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.137 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 23,410,624
Number of extensions: 1021511
Number of successful extensions: 1819
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 1804
Number of HSP's successfully gapped: 8
Length of query: 663
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 556
Effective length of database: 11,448,903
Effective search space: 6365590068
Effective search space used: 6365590068
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)