BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0329500 Os04g0329500|AK064343
(467 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0329500 Protein of unknown function DUF295 family protein 933 0.0
Os04g0317300 Protein of unknown function DUF295 family protein 864 0.0
Os04g0316800 Protein of unknown function DUF295 family protein 678 0.0
Os11g0594600 Protein of unknown function DUF295 family protein 286 2e-77
Os11g0595100 Protein of unknown function DUF295 family protein 248 5e-66
Os11g0594500 151 1e-36
Os11g0594900 132 4e-31
Os08g0293200 Conserved hypothetical protein 107 2e-23
Os06g0148700 Cyclin-like F-box domain containing protein 97 2e-20
Os06g0148600 Protein of unknown function DUF295 family protein 93 4e-19
Os04g0330000 Conserved hypothetical protein 78 1e-14
Os07g0140900 74 3e-13
>Os04g0329500 Protein of unknown function DUF295 family protein
Length = 467
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/467 (97%), Positives = 456/467 (97%)
Query: 1 MKPPVAMDSAGGNSGKLFDEMPPRSSDRGCPRSPSPAAMEHGFDRHCVVLGGMPKKRSRL 60
MKPPVAMDSAGGNSGKLFDEMPPRSSDRGCPRSPSPAAMEHGFDRHCVVLGGMPKKRSRL
Sbjct: 1 MKPPVAMDSAGGNSGKLFDEMPPRSSDRGCPRSPSPAAMEHGFDRHCVVLGGMPKKRSRL 60
Query: 61 ELDAGVSLWAGLQPDILGIVLHFLPCLADRARMRSVCRHWRASANGHVXXXXXXXXXXXG 120
ELDAGVSLWAGLQPDILGIVLHFLPCLADRARMRSVCRHWRASANGHV G
Sbjct: 61 ELDAGVSLWAGLQPDILGIVLHFLPCLADRARMRSVCRHWRASANGHVLPPPLPLLMLPG 120
Query: 121 FKFSSLSDKGDLMPVRCVPVPKEVAADDLRCVGYFDGWLVGVTPNKDRSDEYNRDADGDC 180
FKFSSLSDKGDLMPVRCVPVPKEVAADDLRCVGYFDGWLVGVTPNKDRSDEYNRDADGDC
Sbjct: 121 FKFSSLSDKGDLMPVRCVPVPKEVAADDLRCVGYFDGWLVGVTPNKDRSDEYNRDADGDC 180
Query: 181 FLVNVFSRKVIRLPQLCHMRYNFPAYSSKTLRIINGSGEVYFRVNDIYTMSLCNVALSAS 240
FLVNVFSRKVIRLPQLCHMRYNFPAYSSKTLRIINGSGEVYFRVNDIYTMSLCNVALSAS
Sbjct: 181 FLVNVFSRKVIRLPQLCHMRYNFPAYSSKTLRIINGSGEVYFRVNDIYTMSLCNVALSAS 240
Query: 241 PDSRGKYIVAASSDHKCASKLALWQPGMISWHICAGVDIDGPRDLTFYLGKLYVLQRYKI 300
PDSRGKYIVAASSDHKCASKLALWQPGMISWHICAGVDIDGPRDLTFYLGKLYVLQRYKI
Sbjct: 241 PDSRGKYIVAASSDHKCASKLALWQPGMISWHICAGVDIDGPRDLTFYLGKLYVLQRYKI 300
Query: 301 RLFAFEVGEDNGGLMVSRVKRCLSALPLHHPYQGGGAISCNMVVWRGELLLIIRHYSDNY 360
RLFAFEVGEDNGGLMVSRVKRCLSALPLHHPYQGGGAISCNMVVWRGELLLIIRHYSDNY
Sbjct: 301 RLFAFEVGEDNGGLMVSRVKRCLSALPLHHPYQGGGAISCNMVVWRGELLLIIRHYSDNY 360
Query: 361 RDREVLKVEVFALDVNTNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHHGVEGDHIYFVP 420
RDREVLKVEVFALDVNTNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHHGVEGDHIYFVP
Sbjct: 361 RDREVLKVEVFALDVNTNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHHGVEGDHIYFVP 420
Query: 421 DDWKPYDTFVYSMRDGKMRSFAVKLLASDFDVDQLSRDFPVWLLPTE 467
DDWKPYDTFVYSMRDGKMRSFAVKLLASDFDVDQLSRDFPVWLLPTE
Sbjct: 421 DDWKPYDTFVYSMRDGKMRSFAVKLLASDFDVDQLSRDFPVWLLPTE 467
>Os04g0317300 Protein of unknown function DUF295 family protein
Length = 445
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/445 (95%), Positives = 425/445 (95%)
Query: 1 MKPPVAMDSAGGNSGKLFDEMPPRSSDRGCPRSPSPAAMEHGFDRHCVVLGGMPKKRSRL 60
MKPPVAMDSAGGNSGKLFDEMPPRSSDRGCPRSPSPAAMEHGFDRHCVVLGGMPKKRSRL
Sbjct: 1 MKPPVAMDSAGGNSGKLFDEMPPRSSDRGCPRSPSPAAMEHGFDRHCVVLGGMPKKRSRL 60
Query: 61 ELDAGVSLWAGLQPDILGIVLHFLPCLADRARMRSVCRHWRASANGHVXXXXXXXXXXXG 120
ELDAGVSLWAGLQPDILGIVLHFLPCLADRARMRSVCRHWRASANGHV G
Sbjct: 61 ELDAGVSLWAGLQPDILGIVLHFLPCLADRARMRSVCRHWRASANGHVLPPPLPLLMLPG 120
Query: 121 FKFSSLSDKGDLMPVRCVPVPKEVAADDLRCVGYFDGWLVGVTPNKDRSDEYNRDADGDC 180
FKFSSLSDKGDLMPVRCVPVPKEVAADDLRCVG F GWLVGVTPNKDRSDEYNRDADGDC
Sbjct: 121 FKFSSLSDKGDLMPVRCVPVPKEVAADDLRCVGSFHGWLVGVTPNKDRSDEYNRDADGDC 180
Query: 181 FLVNVFSRKVIRLPQLCHMRYNFPAYSSKTLRIINGSGEVYFRVNDIYTMSLCNVALSAS 240
FLVNVFSRKVIRLPQLCHMRYNFPAYSSKTLRIINGSGEVYFRVNDIYTMSLCNVALSAS
Sbjct: 181 FLVNVFSRKVIRLPQLCHMRYNFPAYSSKTLRIINGSGEVYFRVNDIYTMSLCNVALSAS 240
Query: 241 PDSRGKYIVAASSDHKCASKLALWQPGMISWHICAGVDIDGPRDLTFYLGKLYVLQRYKI 300
PDSRGKYIVAASSDHKCASKLALWQPGMISWHICAGVDIDGPRDLTFYLGKLYVLQRYKI
Sbjct: 241 PDSRGKYIVAASSDHKCASKLALWQPGMISWHICAGVDIDGPRDLTFYLGKLYVLQRYKI 300
Query: 301 RLFAFEVGEDNGGLMVSRVKRCLSALPLHHPYQGGGAISCNMVVWRGELLLIIRHYSDNY 360
RLFAFEVGEDNGGLMVSRVKRCLSALPLHHPYQ GGAISCNMVVWRGELLLIIRHYSDNY
Sbjct: 301 RLFAFEVGEDNGGLMVSRVKRCLSALPLHHPYQEGGAISCNMVVWRGELLLIIRHYSDNY 360
Query: 361 RDREVLKVEVFALDVNTNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHHGVEGDHIYFVP 420
RDREVLKVEVFALDVNTNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHHGVEGDHIYFVP
Sbjct: 361 RDREVLKVEVFALDVNTNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHHGVEGDHIYFVP 420
Query: 421 DDWKPYDTFVYSMRDGKMRSFAVKL 445
DDWKPYDTFVYSMRDG +K+
Sbjct: 421 DDWKPYDTFVYSMRDGSHLILFMKI 445
>Os04g0316800 Protein of unknown function DUF295 family protein
Length = 1316
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/426 (78%), Positives = 363/426 (85%), Gaps = 10/426 (2%)
Query: 11 GGNSGKLFDEMPPRSSDRGCPRSPSPAAMEHGFDRHCVVLGGMPKKRSRLELDAGVSLWA 70
G GKLFD M S++G PR+ SPAA++ DR VVLGGMPKK SRLELDAGVSLWA
Sbjct: 2 GNLDGKLFDGMHLCLSEQGSPRTQSPAAVDPSLDRSGVVLGGMPKKMSRLELDAGVSLWA 61
Query: 71 GLQPDILGIVLHFLPCLADRARMRSVCRHWRASANGHVXXXXXXXXXXXGFKFSSLSDKG 130
GLQPDILGIVLHFLPCLADRAR+R ANGHV GFKFSSLSDKG
Sbjct: 62 GLQPDILGIVLHFLPCLADRARVR---------ANGHVLPPPLPLLVLPGFKFSSLSDKG 112
Query: 131 DLMPVRCVPVPKEVAADDLRCVGYFDGWLVGVTPNKDRSDEYNRDADGDCFLVNVFSRKV 190
D MPVRCVPVPKEVAADDLRCVG F GWLVGVTPNKDRSDEYNRDADGDCFLVNVFSRKV
Sbjct: 113 DFMPVRCVPVPKEVAADDLRCVGSFHGWLVGVTPNKDRSDEYNRDADGDCFLVNVFSRKV 172
Query: 191 IRLPQLCHMRYNFPAYSSKTLRIINGSGEVYFRVNDIYTMSLCNVALSASPDSRGKYIVA 250
IRLPQLCHMRYNFPAYSSKTLRI+NGSGEV+F VNDIYTMSLCNVALSASP+S KYIVA
Sbjct: 173 IRLPQLCHMRYNFPAYSSKTLRIVNGSGEVHFGVNDIYTMSLCNVALSASPES-SKYIVA 231
Query: 251 ASSDHKCASKLALWQPGMISWHICAGVDIDGPRDLTFYLGKLYVLQRYKIRLFAFEVGED 310
ASSDHK A ALWQPGMISW +C+GV+IDGPRDL+FY GKLY+L R++ RLF E+ ED
Sbjct: 232 ASSDHKGAPVPALWQPGMISWQVCSGVEIDGPRDLSFYQGKLYMLMRHRTRLFTCELEED 291
Query: 311 NGGLMVSRVKRCLSALPLHHPYQGGGAISCNMVVWRGELLLIIRHYSDNYRDREVLKVEV 370
+ G MVSR++ L+ LP +HPYQ GGAISCNMVVWRGELLLIIRHY+ +YR R++ KVEV
Sbjct: 292 DRGFMVSRIELSLTELPRNHPYQEGGAISCNMVVWRGELLLIIRHYNGDYRKRQLHKVEV 351
Query: 371 FALDVNTNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHHGVEGDHIYFVPDDWKPYDTFV 430
FALDV+TNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHHGVEGDHIYFVPDDW+PYDTFV
Sbjct: 352 FALDVDTNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHHGVEGDHIYFVPDDWRPYDTFV 411
Query: 431 YSMRDG 436
YSMRDG
Sbjct: 412 YSMRDG 417
>Os11g0594600 Protein of unknown function DUF295 family protein
Length = 416
Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 170/409 (41%), Positives = 226/409 (55%), Gaps = 19/409 (4%)
Query: 69 WAGLQPDILGIVLHFLPCLADRARMRSVCRHWRASANGHVXXXXXXXXXXXGFKFSSLSD 128
WA + DI+G+V+ LP + DRAR+RSVC+ WRA+A H FS
Sbjct: 17 WADIPADIIGVVVGRLPSVEDRARLRSVCQAWRAAARLHRPPPPLPLLVLSNLAFSGFCV 76
Query: 129 KGDLMPVRCVPVPKEV---AADDLRCVGYFDGWLVGVTPNKDRSDEYNRDADGDCFLVNV 185
G + R +P+P EV AA DLRCVG +GWL V K R DG CFLVN
Sbjct: 77 DGAMSETRRIPLPVEVVAAAAGDLRCVGSCEGWLAVVRQKKAR-----YLGDGACFLVNP 131
Query: 186 FSRKVIRLPQLCHMRYNFPAYSSKTLRIINGSGEVYFRVNDI-YTMSLCNVALSASPDSR 244
FSR+V+ LP + Y+ ++L IINGSG V ++ Y MS C V LS+ P S
Sbjct: 132 FSREVVNLPPPFVSTHLVDVYT-RSLPIINGSGVVDCTIHAAQYVMSFCKVILSSPPGSG 190
Query: 245 GKYIVAASSDHKCASKLALWQPGMISWHICAGVDIDGPRDLTFYLGKLYVLQRYKIRLFA 304
Y VAA S H+ +KLALW+PGM SW IC G I D+ FY GK Y+L + LFA
Sbjct: 191 SAYTVAAISVHRNGAKLALWRPGMTSWCICYGGCISKFSDVAFYQGKFYILSKLTTNLFA 250
Query: 305 FEVGEDNGGLMVSRVKRCLSALPLHHPYQGGGAISCNMVVWRGELLLIIRHYSDNYRDRE 364
FE+ ED+ G+MVSRV+RC++ LP G NMV W G+LLL++R+ +
Sbjct: 251 FEITEDDCGMMVSRVERCVTELPQVKDSYGQ---RWNMVEWHGKLLLVVRYIGGSEGWHN 307
Query: 365 VLKVEVFALDVNTNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHHGVEGDHIYFV----- 419
+ KV VF +DV+TNP+ TEI+SL+GDCIF+ SF A + G+E D +YF+
Sbjct: 308 ICKVSVFVMDVSTNPFRFTEINSLDGDCIFISPCSSMSFLACQYDGIEDDLVYFIDGYLF 367
Query: 420 -PDDWKPYDTFVYSMRDGKMRSFAVKLLASDFDVDQLSRDFPVWLLPTE 467
+ P+D FVY+MRD + FA + +F P W P+E
Sbjct: 368 PAKNGPPFDRFVYNMRDCTLAPFAADISDDNFRAPDGRLMSPTWFFPSE 416
>Os11g0595100 Protein of unknown function DUF295 family protein
Length = 408
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 156/393 (39%), Positives = 219/393 (55%), Gaps = 36/393 (9%)
Query: 69 WAGLQPDILGIVLHFLPCLADRARMRSVCRHWRASANGHVXXXXXXXXXXXGFKFSSLSD 128
W + D+LG+VL +PC ADRAR+RSVCR WRA+A F F+SLS
Sbjct: 15 WNDIPADMLGLVLRVIPCAADRARVRSVCRSWRAAAAIQRPPPPLPVLVFSRFSFASLSR 74
Query: 129 KGDLMPVRCVPVPKEVAADD---LRCVGYFDGWLVGVTPNKDRSDEYNRDADGDCFLVNV 185
L P P+ +R VG FD WLVG P+++ +DADG CFL+N+
Sbjct: 75 ---LSPAMAFTKPRRFFFHKDVTIRWVGSFDEWLVGTKPSRE-----CKDADGHCFLLNL 126
Query: 186 FSRKVIRLPQLCHMRYNFPAYSSKTLRIINGSGEVYFRVND-IYTMSLCNVALSASPDSR 244
SRK I+LP+ C + +F Y KTL I+N SG V ++D Y+M V LSASP S
Sbjct: 127 MSRKKIQLPRPCAL--HFFDYFCKTLPIVNTSGWVDIIIHDREYSMCFRKVVLSASPASD 184
Query: 245 GKYIVAASSDHKCASKLALWQPGMISWHICAGVDIDGPRDLTFYLGKLYVLQR-----YK 299
IVAA S + LALW PGM SW +C IDG D+ FY G++Y+ +
Sbjct: 185 SMCIVAAIS----SRTLALWHPGMRSWCVCRSFGIDGSADIAFYQGRIYMAMVSTYFPHI 240
Query: 300 IRLFAFEVGEDNGGLMVSRVKRCLS-ALPLHHPYQGGGAISCNMVVWRGELLLIIRHYSD 358
+ + F++ E NG +MVS V++C++ LP P +G +V WRG+LLLI+ +
Sbjct: 241 LSILFFQLEEVNGRVMVSYVEQCVTETLP---PVEGCVVNEFYIVEWRGKLLLIVMYAEH 297
Query: 359 NYRDREVLKVEVFALDVNTNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHHGVEGDHIYF 418
+ D E K+ ++ALD +TNP+ LTEI++L+GDC+F+ L KSFPA + G +GD +YF
Sbjct: 298 VWLDTE--KIGIYALDFSTNPHSLTEINNLDGDCLFISLRSSKSFPACQYDGAKGDFVYF 355
Query: 419 VPDDWK-------PYDTFVYSMRDGKMRSFAVK 444
V W+ +D VY++RD +V
Sbjct: 356 VSGYWQHATGVHHSFDVLVYNVRDATTTRLSVS 388
>Os11g0594500
Length = 433
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/423 (32%), Positives = 195/423 (46%), Gaps = 43/423 (10%)
Query: 76 ILGIVLHFLPCLADRARMRSVCRH-WRASAN---GHVXXXXXXXXXXXGFKFSSLSDKGD 131
I+G VL L ADRA +RSV R WRA A V F +S+ G
Sbjct: 23 IVGAVLRRLHSSADRAALRSVFRRSWRAGARDYPPLVLAPPLPLVLYPNFALASVFSDGA 82
Query: 132 LMPVRCVPVPKEV--AADDLRCVGYFDGWLVGVTPNKDRSDEYNRDADGDCFLVNVFSRK 189
VP+ + A +C+G F+ WLV ADG C LVN FS +
Sbjct: 83 AAAGHRVPLLAALLDGAFPGQCIGCFEDWLVCTWLRLSIPLYPTVGADGGCVLVNPFSGE 142
Query: 190 VIRLPQLCHMRYNFPAYSSKTLRIINGSGEVYFRVN-DIYTMSLCNVALSASPDSRGKY- 247
+ LP + +++ + NG GEV ++ D Y M+L LSA P++
Sbjct: 143 KVSLPS--PTATHSCGAIQRSVPVSNGDGEVVCTIHADEYAMALYKAVLSAPPNAGSSSS 200
Query: 248 -----------IVAASSDHKCASKLALWQPGMISWHICAGVDIDGPRDLTFYLGKLYVLQ 296
IVAA S K KLA P SW IC G I D+ FYLGKLY++
Sbjct: 201 SSSELDLGSSCIVAAVSQRKGEYKLAFCTPETPSWCICEGNCIKSHIDIEFYLGKLYMVD 260
Query: 297 RYKIRLFAFEV-GEDNGGLMVSRVKRCL-SALPLHHPYQGGGAISCNMVVWRGELLLIIR 354
LFAFE+ D+ +VS V+RCL LP + G + N+V G+LLL++R
Sbjct: 261 TRNGDLFAFELEAHDHVFPVVSLVERCLIEKLP---SAEDGDRQTYNLVQSLGKLLLLVR 317
Query: 355 HYSDNYRDREVLKVEVFALDVNTNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHHGVEGD 414
++ +++ + + V VF L N+NP+ E SL+G+ IF+ KSF A + +E D
Sbjct: 318 YFRESW--DQFVGVRVFELSFNSNPWKWIEKKSLDGESIFISSSCNKSFAASQYEEIEDD 375
Query: 415 HIYFV----------PDDWKPYDTFVYSMRDGKMRSFAVKLLASDFDVDQLSRDFPVWLL 464
IYF+ D Y + VY+MRDG + F L+ + + L FP+W
Sbjct: 376 RIYFLDSLCPKFNPKKSDSYSYCSQVYNMRDGTISPF---LIGTGPMSNYLG--FPMWFC 430
Query: 465 PTE 467
PT+
Sbjct: 431 PTQ 433
>Os11g0594900
Length = 404
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 203/471 (43%), Gaps = 87/471 (18%)
Query: 11 GGNSGKLFDEMPPRSSDRGCPRSPSPAAMEHGFDRHCVVLGGMPKKRSRLELDAGVSL-- 68
G SG PP S C + F+ + + + K+ + + AG +L
Sbjct: 3 GSISGDPSSATPPPLSLALCVCGGRRVLVRGSFEMYACSMKCLTKRLVVVAVPAGDALLR 62
Query: 69 --WAGLQPDILGIVLHFLPCLADRARMRSVCRHWRASANGHVXXXXXXXXXXXGFKFSSL 126
W L D+LG+VL +PC A RAR+RSVC WR +A F F S
Sbjct: 63 GPWNDLPGDLLGLVLGHIPCAAGRARVRSVCSSWRNAAAIQRPPRPLPMLVFSRFGFVSF 122
Query: 127 SDKGDLMPVRCVPVPKEVAADD--LRCVGYFDGWLVGVTPNKDRSDEYNRDADGDCFLVN 184
S +M + + +D LR VG FD WLVG P +DA CFLVN
Sbjct: 123 SSFSSVMVIADAEFTRIPLHEDESLRWVGSFDEWLVGTRPGS-----VCKDAHSHCFLVN 177
Query: 185 VFSRKVIRLPQLCHMRYNFPAYSSKTLRIINGSGEVYFRVNDIYTMSLCNVALSASPDSR 244
A+S +T+++ S FR++ +L V + S D
Sbjct: 178 --------------------AFSRETIQLPRPSA---FRLSHHICKTLPIVNTTGSVD-- 212
Query: 245 GKYIVAASSDHKCASKLALWQPGMISWHICAGVDIDGPRDLTFYLGKLYVLQRYKIRLFA 304
+H+ + ++ Y+ + + + +
Sbjct: 213 -----IIIQEHEYSGRI--------------------------YMAMVSTYFPHILSIMF 241
Query: 305 FEVGEDNGGLMVSRVKRCLS-ALPLHHPYQGGGAISCNMVVWRGELLLIIRHYSDNYRDR 363
F++ E +G +MVS V+RC++ LP P +G ++V WRG+LLLI+ + + +
Sbjct: 242 FQLEEVDGRVMVSYVERCVTQTLP---PVEGCAVNEFHIVEWRGKLLLIVMYADHVWVEN 298
Query: 364 EVLKVEVFALDVNTNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHHGVEGDHIYFVPDDW 423
++ ++ALD +TNPY LTEI++L+GDC+F+ KSFPA + G +GD +YFV
Sbjct: 299 R--RIGIYALDFSTNPYSLTEINNLDGDCLFISSRSSKSFPACQYDGAKGDFVYFVSSFR 356
Query: 424 K-------PYDTFVYSMRDGKMRSFAVKLLASDFD--VDQLSRDFPVWLLP 465
+ +D V+++RD F V + + D +D L +WL P
Sbjct: 357 QQTIGVHHSFDILVFNVRDATTAVFPVLVPGDNSDPFMDNL-----LWLFP 402
>Os08g0293200 Conserved hypothetical protein
Length = 189
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 99/177 (55%), Gaps = 12/177 (6%)
Query: 121 FKFSSLSDKGDLMPVRC-VPVP---KEVAAD-DLRCVGYFDGWLVGVTPNKDRSDEYNRD 175
F FSS +M VR VP+P +E+AA + CVG F+GWLVGV NK R R
Sbjct: 4 FSFSSFCAGETIMGVRGRVPLPEREREMAAGGSVCCVGSFEGWLVGVKANKGRYFGDRRR 63
Query: 176 ADGDCFLVNVFSRKVIRLPQLCHMRYNFPAYSSKTLRIINGSGEVYFRVNDIY-TMSLCN 234
FL+N FSR VIRLP + AY+ ++L IINGSG ++ +N M
Sbjct: 64 -----FLMNSFSRDVIRLPLPSGASRSADAYT-RSLPIINGSGVLHCTINAAKCVMLFWK 117
Query: 235 VALSASPDSRGKYIVAASSDHKCASKLALWQPGMISWHICAGVDIDGPRDLTFYLGK 291
V LS+SPDS K +VAA+S K A KLALW+PGM SW +C G I D+ F K
Sbjct: 118 VVLSSSPDSGSKCVVAATSMVKDAVKLALWRPGMKSWSVCDGDTIIRSIDIVFCHAK 174
>Os06g0148700 Cyclin-like F-box domain containing protein
Length = 291
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 146/336 (43%), Gaps = 62/336 (18%)
Query: 67 SLWAGLQPDILGIVLHFLPCLADRARMRSVCRHWRASANGHVXXXXXXXXXXXGFKFSSL 126
S WA LQP++LG+VL LP LADR R+R+VCR WR++A F S+
Sbjct: 8 SSWADLQPELLGLVLTRLPSLADRVRLRAVCRPWRSNARLQPLPPPLPWLTLLNGTFLSI 67
Query: 127 SDKGDLMPVRCVPVPKEVAADDLRCVGYFDGWLVGVTPNKDRSDEYNRDADGDCFLVNVF 186
SD + C+P+P DD C D WL + DG L+N+F
Sbjct: 68 SDG----EIHCMPLP-----DDASCHCSIDNWL------------FLSHDDGGFSLMNLF 106
Query: 187 SRKVIRLPQL----C-HMRYNFPAYSSKTLRIINGSGEVYFRVNDIYTMSLCNVALSASP 241
S+ ++LP+L C H+ Y P + +++++ L SP
Sbjct: 107 SKATLQLPKLDTIWCHHLWYAAPKF------------PLFYKLA-------VPSPLDFSP 147
Query: 242 DSRGKYIVAASSDHKCASKLALWQPGMISWHI-CAGVDIDGPRDLTFYLGKLYVLQRYKI 300
S +VA + L + QP + + G ++G +D TF GKLYVL +
Sbjct: 148 TS---LVVALIMNRSHQKALCICQPPVATESFRVEGSTMEGMQDFTFLDGKLYVLNNFN- 203
Query: 301 RLFAFEVGEDNGGLMVSRVKRCLSALPLHHPYQGGGAISCNMVVWRGELLLIIRHYSDNY 360
+LF E+ E + ++ R ++ + GG + ++V R +++ +++
Sbjct: 204 KLFILEIDESHIDYLIMRR---------YYLVESGGGL---LMVTRYVGIVLPLAEPNSF 251
Query: 361 RDREVLKVEVFALDVNTNPYGLTEIHSLNGDCIFVG 396
+ L +VF D+ T + SL G +FVG
Sbjct: 252 KHSRTLSFKVFEADLTTGSRMWRRVTSLGGRALFVG 287
>Os06g0148600 Protein of unknown function DUF295 family protein
Length = 393
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 162/424 (38%), Gaps = 64/424 (15%)
Query: 67 SLWAGLQPDILGIVLHFLPCLADRARMRSVCRHWRASANGHVXXXXXXXXXXXGFKFSSL 126
S WA LQ DILG+VL LP LADR R+R+VCR WR++A F S+
Sbjct: 8 SSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQLLTLPPPFPWLNLLDGTFLSI 67
Query: 127 SDKGDLMPVRCVPVPKEVAADDLRCVGYFDGWLVGVTPNKDRSDEYNRDADGDCFLVNVF 186
SD + +P+P DD C G D WL + D+D C L+N F
Sbjct: 68 SDGE----IHRMPLP-----DDASCYGSIDNWL------------FLTDSDDGCSLMNPF 106
Query: 187 SRKVIRLPQLCHMRYNFPAYSSKTLRIINGSGEVYFRVNDIYTMSLCNVALSASPDSRGK 246
S+ ++LP+L + + + G Y ++ + L S DS
Sbjct: 107 SKATLQLPKLARIWH-------------HERGNAYNACTRLFYKLAVPLPLDLSSDSLVA 153
Query: 247 YIVAASSDHK--CASKLALWQPGMISWHICAGVDIDGPRDLTFYLGKLYVLQRYKIRLFA 304
++ H C ++ S+ + D+ F GKLY L K LF
Sbjct: 154 VLMNDPLRHSVVCIVHRSI---STDSFRFHDRPIKNNFYDIAFCGGKLYALSCGK--LFT 208
Query: 305 FEVGEDN-GGLMVSRVKRCLSALPLHH-----PYQGGGAISCNMVVWRGELLLIIRHY-- 356
E+ E + V V+ + P P +V G LL +IR
Sbjct: 209 VEMSEVHIEKPKVPHVECIVEDFPTESHSQPCPENHICVTWPYLVASGGRLLNVIRLVGV 268
Query: 357 -------SDNYRDREVLKVEVFALDVNTNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHH 409
D ++D EV+ D+NT + SL +FVG KS A +
Sbjct: 269 PFPPEDDDDIFKDSLTFSFEVYEADLNTGSRMWRRVESLGDQALFVGRHYSKSLSAAEYV 328
Query: 410 GVEGDHIYFVPDDW-----KPY-DTFVYSMRDGKMRSFAVKLLASDFDVDQLSRDFPVWL 463
G + D IYF+ DD+ P D +Y+MR G + + A + P W
Sbjct: 329 GAQEDCIYFMCDDYFRSDEDPLCDAGIYNMRSGVITPLLQENTAP--RLHPTGEGHPTWF 386
Query: 464 LPTE 467
P +
Sbjct: 387 FPAD 390
>Os04g0330000 Conserved hypothetical protein
Length = 57
Score = 77.8 bits (190), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/51 (68%), Positives = 41/51 (80%)
Query: 317 SRVKRCLSALPLHHPYQGGGAISCNMVVWRGELLLIIRHYSDNYRDREVLK 367
S V L+ LP +HPYQ GGAISCNMVVWRGELLLIIRHY+ +YR R++ K
Sbjct: 7 SLVLSSLTELPRNHPYQEGGAISCNMVVWRGELLLIIRHYNGDYRKRQLHK 57
>Os07g0140900
Length = 258
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 102/236 (43%), Gaps = 40/236 (16%)
Query: 67 SLWAGLQPDILGIVLHFLPCLADRARMRSVCRHWRASA-NGHVXXXXXXXXXXXG-FKFS 124
S W LQP++ G+V L DR R R+VCR WR +A H G +
Sbjct: 29 SPWPDLQPELAGMVFCRLLSHGDRLRFRAVCRRWRLAAWQQHPLPPALPWLNLDGRITYQ 88
Query: 125 SLSDKGDLMPVRCVPVPKEV-AADDLRCVGYFDGWLVGVTPNKDRSDEYNRDADGDCFLV 183
SL D V +PVP E+ A + C G FDGWL+ Y+R +CFL+
Sbjct: 89 SLPDG----EVHRIPVPDELQAGGTVVCRGSFDGWLL-----------YDRSEQLECFLM 133
Query: 184 NVFSRKVIRLPQLCHMRYNFPAYSSKTLRIINGSGEVYFRVNDIYTMSLCNVALSASPDS 243
N S+ I LP H + A G + F N + +++C+ L A+
Sbjct: 134 NPISKARIDLPYHWHCDDDDDAILPDYGEEKEGQRTMCFGENAVRKIAVCSPDLVAA--- 190
Query: 244 RGKYIVAASSDHKCASKLALWQPGMIS-WHICAGVDIDGP---RDLTFYLGKLYVL 295
++A S + ++PGM S W +G GP RD+ +Y GKLY +
Sbjct: 191 ----VIAGSG-------VFFYRPGMHSTWLFASG----GPCFARDIAYYNGKLYSI 231
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.141 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,445,137
Number of extensions: 848574
Number of successful extensions: 1835
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 1803
Number of HSP's successfully gapped: 13
Length of query: 467
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 363
Effective length of database: 11,605,545
Effective search space: 4212812835
Effective search space used: 4212812835
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 158 (65.5 bits)