BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0836800 Os03g0836800|AK061197
(276 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0836800 Similar to IAA-amino acid hydrolase 1 (EC 3.5.... 500 e-142
Os03g0836900 Similar to IAA-amino acid hydrolase 1 (EC 3.5.... 428 e-120
Os07g0249800 Similar to IAA-amino acid hydrolase 1 (EC 3.5.... 266 2e-71
Os04g0521800 Peptidase M20 family protein 230 8e-61
Os01g0560000 Similar to Auxin amidohydrolase 226 1e-59
Os01g0706900 Similar to Auxin amidohydrolase 220 9e-58
Os06g0691400 Similar to IAA-amino acid conjugate hydrolase-... 198 4e-51
Os07g0249900 Peptidase M20 family protein 190 1e-48
>Os03g0836800 Similar to IAA-amino acid hydrolase 1 (EC 3.5.1.-)
Length = 276
Score = 500 bits (1288), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/276 (90%), Positives = 251/276 (90%)
Query: 1 KLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTAT 60
KLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTAT
Sbjct: 1 KLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTAT 60
Query: 61 INGKGGXXXXXXXXXXXXXXXSSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPE 120
INGKGG SSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPE
Sbjct: 61 INGKGGHAAAPHHAVDPIVAVSSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPE 120
Query: 121 SVTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPATVNDEEMY 180
SVTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPATVNDEEMY
Sbjct: 121 SVTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPATVNDEEMY 180
Query: 181 AHAKAVAESMLGEANVKLSPQGMGAEDFGFYAQRIPAAFFXXXXXXXXXXMAETTTKNQL 240
AHAKAVAESMLGEANVKLSPQGMGAEDFGFYAQRIPAAFF MAETTTKNQL
Sbjct: 181 AHAKAVAESMLGEANVKLSPQGMGAEDFGFYAQRIPAAFFGIGVGNDGGGMAETTTKNQL 240
Query: 241 HSPHFVVDEEALPVGAAFHAAVAIEYLNKNASGPSA 276
HSPHFVVDEEALPVGAAFHAAVAIEYLNKNASGPSA
Sbjct: 241 HSPHFVVDEEALPVGAAFHAAVAIEYLNKNASGPSA 276
>Os03g0836900 Similar to IAA-amino acid hydrolase 1 (EC 3.5.1.-)
Length = 414
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/279 (80%), Positives = 232/279 (83%), Gaps = 5/279 (1%)
Query: 1 KLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTAT 60
KLVFQPAE G AGGY+VL+EG +DD Q IF +HV LPAGVV SRPGPFLAGSARFTAT
Sbjct: 138 KLVFQPAEGG-AGGYHVLKEGVLDDTQTIFAVHVATDLPAGVVGSRPGPFLAGSARFTAT 196
Query: 61 INGKGGXXXXXXXXXXXXXXXSSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPE 120
I GKGG SSAVLSLQQIVARET+PLQGAVVSVTTIKGGEAFNVIPE
Sbjct: 197 ITGKGGHAAEPHLAVDPIVAASSAVLSLQQIVARETNPLQGAVVSVTTIKGGEAFNVIPE 256
Query: 121 SVTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPATVNDEEMY 180
SVTLGGTLRSMTTDG+SYLM RIREVIEGQAAVNRCTAAVDFMEDKL PYPATVNDE MY
Sbjct: 257 SVTLGGTLRSMTTDGLSYLMNRIREVIEGQAAVNRCTAAVDFMEDKLRPYPATVNDEGMY 316
Query: 181 AHAKAVAESMLGEANVKLSPQGMGAEDFGFYAQRIPAAFFXXXXXXXXXX---MAETTTK 237
AHAKAVAESMLGEANV +SP MGAEDFGFYAQRIPAAFF MAE TTK
Sbjct: 317 AHAKAVAESMLGEANVTVSPMCMGAEDFGFYAQRIPAAFFGIGVGSNGNDGGGMAE-TTK 375
Query: 238 NQLHSPHFVVDEEALPVGAAFHAAVAIEYLNKNASGPSA 276
NQLHSPHFVVDEEALPVGAAFHAAVAIEYLNKNASG SA
Sbjct: 376 NQLHSPHFVVDEEALPVGAAFHAAVAIEYLNKNASGRSA 414
>Os07g0249800 Similar to IAA-amino acid hydrolase 1 (EC 3.5.1.-)
Length = 222
Score = 266 bits (679), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/208 (62%), Positives = 156/208 (75%), Gaps = 1/208 (0%)
Query: 63 GKGGXXXXXXXXXXXXXXXSSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPESV 122
GKGG SSAVLSLQQ+V+RETDPL+ AVVS+T +KGG+A+NVIPES
Sbjct: 13 GKGGHAGVPHDAVDPVVAVSSAVLSLQQLVSRETDPLEAAVVSITILKGGDAYNVIPESA 72
Query: 123 TLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPATVNDEEMYAH 182
+LGGT RSMT +G++YLMKRIRE+IE QA VNRC AAVDF+E++L PYPATVND+ MY H
Sbjct: 73 SLGGTFRSMTDEGLAYLMKRIREIIEAQAGVNRCAAAVDFLEEELRPYPATVNDDGMYGH 132
Query: 183 AKAVAESMLGEANVKLSPQGMGAEDFGFYAQRIPAAFFXXXXXXXXXXMAETTTKNQLHS 242
AKAVAE+MLGEANV+++ + MG EDF FYA+R P AFF M +HS
Sbjct: 133 AKAVAEAMLGEANVRVAARSMGGEDFAFYARRSPGAFF-FIGVGNETTMGPAAAVRPVHS 191
Query: 243 PHFVVDEEALPVGAAFHAAVAIEYLNKN 270
PHFV+DE ALPVGAA HAAVAIEYLNK+
Sbjct: 192 PHFVLDERALPVGAALHAAVAIEYLNKH 219
>Os04g0521800 Peptidase M20 family protein
Length = 426
Score = 230 bits (587), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 159/272 (58%), Gaps = 5/272 (1%)
Query: 1 KLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTAT 60
+L+FQPAEEG AG Y++++G +D V+ IFGMHVD +P GV+A+ GP A + A
Sbjct: 150 RLLFQPAEEGGAGASYMIKDGVLDGVEAIFGMHVDYRMPTGVIAAHAGPTQAAVCFYEAK 209
Query: 61 INGKGGXXXXXXXXXXXXXXXSSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPE 120
I GK G S +LSLQQ+++RE DPL V+SVT +KGG + P
Sbjct: 210 IEGKTGKAETPHLNVDPIVAASFVILSLQQLISREDDPLHSQVLSVTYVKGGNTIDATPP 269
Query: 121 SVTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPATVNDEEMY 180
+ GGTLRS+TT+G+ L KR++EV+EGQAAV+RC V D P YPA NDE+++
Sbjct: 270 VIEFGGTLRSLTTEGLYRLQKRVKEVVEGQAAVHRCKGVVQIKRDDYPMYPAVFNDEKLH 329
Query: 181 AHAKAVAESMLGEANVKLSPQGMGAEDFGFYAQRIPAAFFXXXXXXXXXXMAETTTKNQL 240
H + V +LG VK + M EDF FY Q +P F E + + +
Sbjct: 330 HHVETVGRRLLGPDKVKPGEKIMAGEDFAFYQQLVPGVMFGIGIRN-----GEVGSVHTV 384
Query: 241 HSPHFVVDEEALPVGAAFHAAVAIEYLNKNAS 272
H+P F VDE+ +P+GAA H A+A YL + ++
Sbjct: 385 HNPKFFVDEDVIPIGAALHTALAEMYLTERST 416
>Os01g0560000 Similar to Auxin amidohydrolase
Length = 442
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/268 (45%), Positives = 164/268 (61%), Gaps = 8/268 (2%)
Query: 2 LVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTATI 61
LVFQPAEEG G ++++GAV++++ IFG+HV +P GVVASRPGP +AGS F A I
Sbjct: 164 LVFQPAEEGGGGAKKMIDDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVI 223
Query: 62 NGKGGXXXXXXXXXXXXXXXSSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPES 121
+GKGG S+ ++SLQQ+V+RE DPL VV+V +GG AFNVIP+S
Sbjct: 224 SGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVVTVGKFQGGGAFNVIPDS 283
Query: 122 VTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPATVNDEEMYA 181
VT+GGT R+ + + L +RI EVI QA+V RC A VDF++ P +P T+N ++
Sbjct: 284 VTIGGTFRAFLKESFNQLKQRIEEVIVSQASVQRCNAVVDFLDKDRPFFPPTINSAGLHD 343
Query: 182 HAKAVAESMLGEANVKLSPQGMGAEDFGFYAQRIPAAFFXXXXXXXXXXMAETTTKNQL- 240
VA M+G NV+ MGAEDF FYA IPA ++ M T Q
Sbjct: 344 FFVKVASEMVGPKNVRDKQPLMGAEDFAFYADAIPATYY------YFLGMYNETRGPQAP 397
Query: 241 -HSPHFVVDEEALPVGAAFHAAVAIEYL 267
HSP+F ++E+ALP GAA A++A YL
Sbjct: 398 HHSPYFTINEDALPYGAALQASLAARYL 425
>Os01g0706900 Similar to Auxin amidohydrolase
Length = 456
Score = 220 bits (560), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 123/271 (45%), Positives = 159/271 (58%), Gaps = 6/271 (2%)
Query: 2 LVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTATI 61
L+FQP EE G ++E GAVD+V+ IFG HV LP GVV SRPGP LAG F A I
Sbjct: 178 LLFQPGEEVGTGARRMVEAGAVDNVEAIFGFHVSVELPTGVVGSRPGPLLAGCGFFEAVI 237
Query: 62 NGKGGXXXXXXXXXXXXXXXSSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPES 121
GKGG S+ VL+LQ +V+RE DPL+ VV+VT G+A NVIPES
Sbjct: 238 TGKGGHAAHPHASVDPILAASTVVLALQGLVSREADPLEAQVVTVTRFLAGDALNVIPES 297
Query: 122 VTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPATVNDEEMYA 181
+T+GGT R + +G L +RI EVI Q+AV RC AAVDF P P T+N ++A
Sbjct: 298 ITIGGTFRVFSNEGFLRLKRRIEEVIVAQSAVYRCAAAVDFHAGGRPLLPPTINSAALHA 357
Query: 182 HAKAVAESMLGEANVKLSPQ--GMGAEDFGFYAQRIPAAFFXXXXXXXXXXMAETTTKNQ 239
H +AVA LG + L MG+EDF +++ +PA+ F AE +
Sbjct: 358 HFQAVAAETLGASAAVLGAMEPCMGSEDFAVFSEAVPASHFYFVGVRNE---AEGLV-HL 413
Query: 240 LHSPHFVVDEEALPVGAAFHAAVAIEYLNKN 270
HSPHF VD+ ALP GAA HA++A+ YL++
Sbjct: 414 AHSPHFRVDDAALPYGAALHASLAMRYLDER 444
>Os06g0691400 Similar to IAA-amino acid conjugate hydrolase-like protein
(Fragment)
Length = 510
Score = 198 bits (503), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 151/275 (54%), Gaps = 21/275 (7%)
Query: 1 KLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTAT 60
+L+FQPAEE AG ++E GA++DV+ IF +HV P V+ SR GP LAG F A
Sbjct: 226 RLLFQPAEESGAGAKRMIEGGALEDVEAIFAVHVSHQHPTSVIGSRTGPLLAGCGFFKAV 285
Query: 61 INGKGGXXXXXXXXXXXXXXXSSAVLSLQQIVARETDPLQGAVVSVTTIKGGE------- 113
I+G +S ++SLQ IV+RE DPL VVSV + G +
Sbjct: 286 IHG-------GRRSGDAVLAAASTIISLQSIVSREADPLDSQVVSVAMVNGSDHPAATAR 338
Query: 114 -AFNVIPESVTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPA 172
A E LGGT R+ + + +RI EVI QA V+ C AAVDF E++ YP
Sbjct: 339 AAAAEEEEEFVLGGTFRAFSNASFYQVRRRIEEVITAQARVHGCEAAVDFFENQ-SFYPP 397
Query: 173 TVNDEEMYAHAKAVAESMLGEANVKLSPQGMGAEDFGFYAQRIPAAFFXXXXXXXXXXMA 232
TVND MYAH KAVA +LG + + P MGAEDF FY+Q +PA F+
Sbjct: 398 TVNDARMYAHVKAVAGELLGAGSYRDVPPMMGAEDFSFYSQVVPAGFYYIGVRNETLGSV 457
Query: 233 ETTTKNQLHSPHFVVDEEALPVGAAFHAAVAIEYL 267
T HSP+F++DE+ LP GAAFHAA+A YL
Sbjct: 458 HTG-----HSPYFMIDEDVLPTGAAFHAAIAERYL 487
>Os07g0249900 Peptidase M20 family protein
Length = 159
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/159 (62%), Positives = 122/159 (76%), Gaps = 2/159 (1%)
Query: 114 AFNVIPESVTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPAT 173
A+NVIP+SV GGT+RSMT +G++YLMKRI+E++EGQAAVNRC VDFME+ + PYPA
Sbjct: 1 AYNVIPQSVEFGGTMRSMTDEGLAYLMKRIKEIVEGQAAVNRCGGGVDFMEESMRPYPAV 60
Query: 174 VNDEEMYAHAKAVAESMLGEANVKLSPQGMGAEDFGFYAQRIPAAFFXXXXXXXXXXMAE 233
VNDE MYAHA+A AE +LG V+++PQ MGAEDFGFYA R+P+AFF A
Sbjct: 61 VNDEGMYAHARASAERLLGAGGVRVAPQLMGAEDFGFYAARMPSAFFTIGVGNATTSSAR 120
Query: 234 TTTKNQLHSPHFVVDEEALPVGAAFHAAVAIEYLNKNAS 272
+ HSPHFV+DE ALPVGAA HAAVAI+YL+K+AS
Sbjct: 121 AA--HTTHSPHFVIDEAALPVGAAVHAAVAIDYLSKHAS 157
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.132 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,779,589
Number of extensions: 331751
Number of successful extensions: 875
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 863
Number of HSP's successfully gapped: 8
Length of query: 276
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 177
Effective length of database: 11,866,615
Effective search space: 2100390855
Effective search space used: 2100390855
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 155 (64.3 bits)