BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0832200 Os03g0832200|AK070712
(442 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0832200 Similar to Calcium-binding protein precursor (... 693 0.0
Os07g0246200 Similar to Calreticulin (Fragment) 569 e-162
Os05g0507300 Similar to Calreticulin 3 (Fragment) 292 4e-79
Os03g0807400 Similar to Calreticulin 2 precursor 242 4e-64
Os04g0402100 Similar to Calnexin (Fragment) 209 3e-54
Os01g0895600 Similar to Calreticulin 3 (Fragment) 104 1e-22
Os08g0560800 68 2e-11
>Os03g0832200 Similar to Calcium-binding protein precursor (Calreticulin)
Length = 442
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/421 (83%), Positives = 352/421 (83%)
Query: 1 MAIPRRXXXXXXXXXXXXXXXXXXGEVFFQEKFDDGWEDRWVKSEWKKDDNRAGEWNHTS 60
MAIPRR GEVFFQEKFDDGWEDRWVKSEWKKDDNRAGEWNHTS
Sbjct: 1 MAIPRRSAAAVAAVVALASVAAVAGEVFFQEKFDDGWEDRWVKSEWKKDDNRAGEWNHTS 60
Query: 61 GKWYGDADDKGIQTSEDYRFYAISAKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLG 120
GKWYGDADDKGIQTSEDYRFYAISAKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLG
Sbjct: 61 GKWYGDADDKGIQTSEDYRFYAISAKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLG 120
Query: 121 GDVDQKKFGGETPYSIMFGPDICGYATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTL 180
GDVDQKKFGGETPYSIMFGPDICGYATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTL
Sbjct: 121 GDVDQKKFGGETPYSIMFGPDICGYATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTL 180
Query: 181 IIRPDAKYSILIDNTEKQTGSIYDDWNIIPPKNKRDPEAKKPEDWDDNEYIPDPEDKKPE 240
IIRPDAKYSILIDNTEKQTGSIYDDWNIIPPKNKRDPEAKKPEDWDDNEYIPDPEDKKPE
Sbjct: 181 IIRPDAKYSILIDNTEKQTGSIYDDWNIIPPKNKRDPEAKKPEDWDDNEYIPDPEDKKPE 240
Query: 241 GYDDIPKEITDPEATKPXXXXXXXXXXXTAPTIPNPEYKGPWNQKKLKNPNYKGKWKAPL 300
GYDDIPKEITDPEATKP TAPTIPNPEYKGPWNQKKLKNPNYKGKWKAPL
Sbjct: 241 GYDDIPKEITDPEATKPEDWDDEEDGEWTAPTIPNPEYKGPWNQKKLKNPNYKGKWKAPL 300
Query: 301 IPNPDYKDDPYIYAFDSLNHIGIELWQVKSGTLFDNILITDDPEYAKKFAEETWXXXXXX 360
IPNPDYKDDPYIYAFDSLNHIGIELWQVKSGTLFDNILITDDPEYAKKFAEETW
Sbjct: 301 IPNPDYKDDPYIYAFDSLNHIGIELWQVKSGTLFDNILITDDPEYAKKFAEETWAKHKDA 360
Query: 361 XXXXXXXXXXXRLEEESANSKIXXXXXXXXXXXXXXXXXXXXXXXEQTKDKGDEKPQDIK 420
RLEEESANSKI EQTKDKGDEKPQDIK
Sbjct: 361 EKAAFDEAEKKRLEEESANSKIDDSDDDASDDEDEADDDKADVVAEQTKDKGDEKPQDIK 420
Query: 421 V 421
V
Sbjct: 421 V 421
>Os07g0246200 Similar to Calreticulin (Fragment)
Length = 424
Score = 569 bits (1467), Expect = e-162, Method: Compositional matrix adjust.
Identities = 276/330 (83%), Positives = 297/330 (90%)
Query: 25 GEVFFQEKFDDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGIQTSEDYRFYAIS 84
GEVFFQEKF+DGWE RWVKSEWKKD+N AGEWNHTSGKW GD +DKGIQTSEDYRFYAIS
Sbjct: 29 GEVFFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPEDKGIQTSEDYRFYAIS 88
Query: 85 AKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETPYSIMFGPDICG 144
A+YPEFS+KDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGG+TPYSIMFGPDICG
Sbjct: 89 AEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDICG 148
Query: 145 YATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTLIIRPDAKYSILIDNTEKQTGSIYD 204
Y+TKKVH I TKN KNHLIKKDVPC+TDQL+HVYTLII PDA Y+ILIDN EKQ+GSIY+
Sbjct: 149 YSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIYE 208
Query: 205 DWNIIPPKNKRDPEAKKPEDWDDNEYIPDPEDKKPEGYDDIPKEITDPEATKPXXXXXXX 264
W+I+PPK +DPEAKKPEDWDD EYIPDPEDKKPEGYDDIPKEI DP+A KP
Sbjct: 209 HWDILPPKQIKDPEAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDWDDEE 268
Query: 265 XXXXTAPTIPNPEYKGPWNQKKLKNPNYKGKWKAPLIPNPDYKDDPYIYAFDSLNHIGIE 324
TAPTIPNPEYKGPW QKK+KNPNY+GKWKAP+I NPD+KDDPYIYAFDSL +IGIE
Sbjct: 269 DGEWTAPTIPNPEYKGPWKQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIE 328
Query: 325 LWQVKSGTLFDNILITDDPEYAKKFAEETW 354
LWQVKSGTLFDN LITDDPE AK FAEETW
Sbjct: 329 LWQVKSGTLFDNFLITDDPELAKTFAEETW 358
>Os05g0507300 Similar to Calreticulin 3 (Fragment)
Length = 302
Score = 292 bits (747), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 138/235 (58%), Positives = 177/235 (75%)
Query: 119 LGGDVDQKKFGGETPYSIMFGPDICGYATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVY 178
+ G V+QKKFGG+TPYS MFGPDICG TKK+H IL+ G+N+ IKKD+ C+TD+LTH Y
Sbjct: 1 MSGYVNQKKFGGDTPYSFMFGPDICGDQTKKLHLILSYQGQNYPIKKDLKCETDKLTHFY 60
Query: 179 TLIIRPDAKYSILIDNTEKQTGSIYDDWNIIPPKNKRDPEAKKPEDWDDNEYIPDPEDKK 238
T I+RPDA YS+L+DN E++ GS+Y DW+I+PP+ ++ AKKP+DWDD EYI DP++ K
Sbjct: 61 TFILRPDASYSLLVDNREREFGSMYTDWDILPPRKIKESNAKKPKDWDDREYIEDPDEVK 120
Query: 239 PEGYDDIPKEITDPEATKPXXXXXXXXXXXTAPTIPNPEYKGPWNQKKLKNPNYKGKWKA 298
PEGYD IPKEI DP+ KP IPNPEYKG W +KK+KNPNYKGKWK
Sbjct: 121 PEGYDSIPKEIPDPKDKKPESWDDDDDGVWKPRMIPNPEYKGRWKRKKIKNPNYKGKWKI 180
Query: 299 PLIPNPDYKDDPYIYAFDSLNHIGIELWQVKSGTLFDNILITDDPEYAKKFAEET 353
P I NP+++DDP +Y L ++GIE+WQVK+G++FDNILI DDPEYA+ +E
Sbjct: 181 PWIDNPEFEDDPDLYVLKPLQYVGIEVWQVKAGSVFDNILICDDPEYARSVVDEV 235
>Os03g0807400 Similar to Calreticulin 2 precursor
Length = 212
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 112/123 (91%), Positives = 118/123 (95%)
Query: 35 DGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGIQTSEDYRFYAISAKYPEFSSKD 94
DGWEDRWVKSEWKK+DN GEWNHT+GKW GD ++KGIQTSEDYRFYAISA+YPEFS+KD
Sbjct: 66 DGWEDRWVKSEWKKEDNTVGEWNHTAGKWNGDTNNKGIQTSEDYRFYAISAEYPEFSNKD 125
Query: 95 KTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETPYSIMFGPDICGYATKKVHAIL 154
KTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETPYSIMFGPDICGYATKKVHAIL
Sbjct: 126 KTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETPYSIMFGPDICGYATKKVHAIL 185
Query: 155 TKN 157
TK
Sbjct: 186 TKG 188
>Os04g0402100 Similar to Calnexin (Fragment)
Length = 537
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 154/382 (40%), Positives = 199/382 (52%), Gaps = 65/382 (17%)
Query: 28 FFQEKFDDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGIQTSEDYRFYAISAKY 87
F E FD+ +E RWV S KDD + G W H + +D G+ SE + YAI +
Sbjct: 26 LFYEPFDESFEGRWVLS--GKDDYK-GVWKHEKSDGH---EDYGLLVSEKAKKYAIIKEL 79
Query: 88 PE-FSSKDKTLVLQFSVKHEQKLDCGGGYVKLL---GGDVDQKKFGGETPYSIMFGPDIC 143
E + KD T+VLQF V+ + L+CGG Y+K + D K+F ETPY+IMFGPD C
Sbjct: 80 DEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGPDKC 139
Query: 144 GYATKKVHAILT----KNGK--NHLIKKDVPCKTDQLTHVYTLIIRPDAKYSILIDNTEK 197
G +T KVH IL K GK H +K D+L+HVYT I++PD + IL+D EK
Sbjct: 140 G-STNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEK 198
Query: 198 QTGSIY--DDW--NIIPPKNKRDPEAKKPEDWDDNEYIPDP------------------- 234
+ + DD+ ++IP K DP+ KKPEDWD+ IPDP
Sbjct: 199 KKANFLSADDFEPSLIPSKTIPDPDDKKPEDWDERAKIPDPDAVKPDDWDEDAPMEIEDE 258
Query: 235 EDKKPEGY-DDIPKEITDPEATKPXXXXXXXXXXXTAPTIPNPE---------------- 277
E KPEG+ DD P+EI DPEA KP AP I NP+
Sbjct: 259 EATKPEGWLDDEPEEIDDPEANKPEDWDDEEDGEWEAPKIDNPKCEEAPGCGEWKRPMKQ 318
Query: 278 ---YKGPWNQKKLKNPNYKGKWKAPLIPNPDY--KDDPYIYAFDSLNHIGIELWQVKSGT 332
YKG W+ + NPNYKG WK IPNP+Y D P D + IGIE+W ++ G
Sbjct: 319 NPAYKGKWHAPLIDNPNYKGIWKPQEIPNPEYFELDKP---DSDPIAAIGIEIWTMQDGI 375
Query: 333 LFDNILITDDPEYAKKFAEETW 354
LFDNILI DD + A E++W
Sbjct: 376 LFDNILIADDEKVATSILEKSW 397
>Os01g0895600 Similar to Calreticulin 3 (Fragment)
Length = 179
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 59/70 (84%)
Query: 285 KKLKNPNYKGKWKAPLIPNPDYKDDPYIYAFDSLNHIGIELWQVKSGTLFDNILITDDPE 344
+K+KNPNYKGKWK P I NP+++DDP +Y L +IGIE+WQVK+G++FDNILI DDPE
Sbjct: 41 QKIKNPNYKGKWKIPWIDNPEFEDDPDLYVLKPLKYIGIEVWQVKAGSVFDNILICDDPE 100
Query: 345 YAKKFAEETW 354
YA+K AEETW
Sbjct: 101 YARKAAEETW 110
>Os08g0560800
Length = 135
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 318 LNHIGIELWQVKSGTLFDNILITDDPEYAKKFAEETWXXXXXXXXXXXXXXXXXRLEEES 377
L+H +VKSGTLFDNILITDDPEYAKKFAEETW RLEE+
Sbjct: 28 LDHEDFTGVRVKSGTLFDNILITDDPEYAKKFAEETWAKHKDAEKTAFDEAEKRRLEEDD 87
Query: 378 ANSKIXXXXXXXXXXXXXXXXXXXXXXXEQTKDKGDEKPQDIKV 421
+ EQTKD D+KPQDIKV
Sbjct: 88 EDEA---------------DDDKADVVAEQTKDSDDDKPQDIKV 116
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.312 0.136 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,711,017
Number of extensions: 687799
Number of successful extensions: 1149
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1107
Number of HSP's successfully gapped: 7
Length of query: 442
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 338
Effective length of database: 11,605,545
Effective search space: 3922674210
Effective search space used: 3922674210
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 158 (65.5 bits)