BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0796600 Os03g0796600|AK105257
(405 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0796600 Protein of unknown function DUF506, plant fami... 550 e-157
Os03g0162500 Protein of unknown function DUF506, plant fami... 195 7e-50
Os10g0417800 Protein of unknown function DUF506, plant fami... 177 1e-44
Os07g0181500 Protein of unknown function DUF506, plant fami... 148 6e-36
Os01g0973600 Protein of unknown function DUF506, plant fami... 127 1e-29
Os01g0879600 126 2e-29
Os05g0519300 Protein of unknown function DUF506, plant fami... 123 3e-28
Os11g0437100 108 7e-24
Os01g0747300 Protein of unknown function DUF506, plant fami... 104 1e-22
Os02g0720400 Protein of unknown function DUF506, plant fami... 103 2e-22
Os11g0437600 Protein of unknown function DUF506, plant fami... 99 5e-21
Os01g0915000 Protein of unknown function DUF506, plant fami... 87 3e-17
>Os03g0796600 Protein of unknown function DUF506, plant family protein
Length = 405
Score = 550 bits (1416), Expect = e-157, Method: Compositional matrix adjust.
Identities = 290/405 (71%), Positives = 290/405 (71%)
Query: 1 MRSMPFQLKNGHHHHGAMEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASERLAGDGK 60
MRSMPFQLKNGHHHHGAMEGK ASERLAGDGK
Sbjct: 1 MRSMPFQLKNGHHHHGAMEGKPPVTPMQQQQQHAPPPRVSRFRRLLVRVSASERLAGDGK 60
Query: 61 ERXXXXXXXXXXXXXXXXXXXXXXXLDRMVLSFMEDSAAVERPQRGRCNCFNGSNYEESD 120
ER LDRMVLSFMEDSAAVERPQRGRCNCFNGSNYEESD
Sbjct: 61 ERGEKEAEKVSASAAGGEVEAGSVGLDRMVLSFMEDSAAVERPQRGRCNCFNGSNYEESD 120
Query: 121 DEEGFFLXXXXXXXXXXXXXXXXLESLKGLVQSASVAERNLLADASRIAERCCKGSKGKA 180
DEEGFFL LESLKGLVQSASVAERNLLADASRIAERCCKGSKGKA
Sbjct: 121 DEEGFFLPSDHSSASAPAAAGDALESLKGLVQSASVAERNLLADASRIAERCCKGSKGKA 180
Query: 181 ECRRAVADGLRALGYDAAVCRSRWEKTSSYPAGEHEYIDAVVGEEVRLIVEVDFRSEFEV 240
ECRRAVADGLRALGYDAAVCRSRWEKTSSYPAGEHEYIDAVVGEEVRLIVEVDFRSEFEV
Sbjct: 181 ECRRAVADGLRALGYDAAVCRSRWEKTSSYPAGEHEYIDAVVGEEVRLIVEVDFRSEFEV 240
Query: 241 ARSTKAYRAALQALPPLFVGTPDRLGQIVAVVAEAARQSLKKKGLHFPPWRKPEYMRAKW 300
ARSTKAYRAALQALPPLFVGTPDRLGQIVAVVAEAARQSLKKKGLHFPPWRKPEYMRAKW
Sbjct: 241 ARSTKAYRAALQALPPLFVGTPDRLGQIVAVVAEAARQSLKKKGLHFPPWRKPEYMRAKW 300
Query: 301 LSPHVRSGDXXXXXXXXXXXXXXXXXXXXXXXXFSGAFELLFDRKQSGEIPAAEKITVVV 360
LSPHVRSGD FSGAFELLFDRKQSGEIPAAEKITVVV
Sbjct: 301 LSPHVRSGDKAAAAAKTVTSTTSATATPVSAASFSGAFELLFDRKQSGEIPAAEKITVVV 360
Query: 361 SPSPWRPTEEAXXXXXXXXXXXXXXXXXXXXXXXAKVVTGLAAVL 405
SPSPWRPTEEA AKVVTGLAAVL
Sbjct: 361 SPSPWRPTEEASKKKPPPSPSPPQLWQQHQQPPKAKVVTGLAAVL 405
>Os03g0162500 Protein of unknown function DUF506, plant family protein
Length = 307
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 120/229 (52%), Positives = 143/229 (62%), Gaps = 16/229 (6%)
Query: 86 LDRMVLSFMEDSAAVERPQRGR--CNCFNGSNYEESDDEEGFFLXXXXXXXXXXXXXXXX 143
LD MV SF+ED VERP CNCF+G E
Sbjct: 60 LDGMVRSFLEDGVGVERPAGAARCCNCFHGG--------EASDDDDDGPAAAEAAATSDA 111
Query: 144 LESLKGLVQSASVAERNLLADASRIAERCCKGSKGKAECRRAVADGLRALGYDAAVCRSR 203
E++KGLV AS+ ERNLLAD S + ER K + R +AD LRA G+DAAVC SR
Sbjct: 112 AETIKGLVHCASLRERNLLADVSTLVERHRAAGARKRDLLRLLADSLRAAGHDAAVCISR 171
Query: 204 WEKTSSYPAGEHEYIDAVV------GEEVRLIVEVDFRSEFEVARSTKAYRAALQALPPL 257
W+K+SS+P GEH Y+D ++ E R++V+VDFRSEFEVAR TKAYRA LQ LP +
Sbjct: 172 WDKSSSHPKGEHAYLDVLLPPASDRAERERILVDVDFRSEFEVARPTKAYRAVLQRLPSV 231
Query: 258 FVGTPDRLGQIVAVVAEAARQSLKKKGLHFPPWRKPEYMRAKWLSPHVR 306
FVG DRL +VA A+AAR SLKK+GLH PPWRKPEYMRAKWLSP+ R
Sbjct: 232 FVGKEDRLRLLVAAAADAARASLKKRGLHLPPWRKPEYMRAKWLSPYER 280
>Os10g0417800 Protein of unknown function DUF506, plant family protein
Length = 301
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/234 (49%), Positives = 141/234 (60%), Gaps = 24/234 (10%)
Query: 86 LDRMVLSFMEDS----AAVERPQRG---RCNCFNGSNYEESDDEEGFFLXXXXXXXXXXX 138
LD MV SF+ED AAVER RCNCF+G +
Sbjct: 53 LDGMVRSFLEDGSGVGAAVERAGGHGARRCNCFHGGGSSDD-----------DDDEDDAA 101
Query: 139 XXXXXLESLKGLVQSASVAERNLLADASRIAERCCKGSKGKAECRRAVADGLRALGYDAA 198
E++KGLV A++ ERNLLAD ER G + E VA LRA G+DAA
Sbjct: 102 ASSDVAETIKGLVHCATLRERNLLADVCGHVERHRAGGARRRELLGLVAASLRAAGHDAA 161
Query: 199 VCRSRWEKTSSYPAGEHEYIDAVV------GEEVRLIVEVDFRSEFEVARSTKAYRAALQ 252
VC SRW+K+ ++PAGEH Y+D ++ G R++V+VDFRS FEVAR TKAYRA LQ
Sbjct: 162 VCVSRWDKSPTHPAGEHAYVDVLLPPASDRGARERVLVDVDFRSAFEVARPTKAYRALLQ 221
Query: 253 ALPPLFVGTPDRLGQIVAVVAEAARQSLKKKGLHFPPWRKPEYMRAKWLSPHVR 306
LP +FVG DRL +VA A+AAR SL+K+GLH PPWRKPEYMRAKWLSP+ R
Sbjct: 222 RLPAVFVGKDDRLRLLVAASADAARASLRKRGLHLPPWRKPEYMRAKWLSPYDR 275
>Os07g0181500 Protein of unknown function DUF506, plant family protein
Length = 213
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/135 (66%), Positives = 99/135 (73%), Gaps = 7/135 (5%)
Query: 86 LDRMVLSFMEDSAA--VERPQRGRC-NCFNGSNYEESDDEEGFFL---XXXXXXXXXXXX 139
LDRMVLSFMEDSAA VERP RGRC +CFNG + SDDEE FL
Sbjct: 66 LDRMVLSFMEDSAAAAVERPPRGRCGSCFNGGG-DGSDDEEFDFLPSDSSATAAASAAAA 124
Query: 140 XXXXLESLKGLVQSASVAERNLLADASRIAERCCKGSKGKAECRRAVADGLRALGYDAAV 199
L++LKGLVQSAS+AERNLLADASRIAERC KG K KA+ R AVADGL ALGYDAAV
Sbjct: 125 AGDALDALKGLVQSASMAERNLLADASRIAERCRKGGKKKADVRCAVADGLAALGYDAAV 184
Query: 200 CRSRWEKTSSYPAGE 214
C+SRW+KT SYPAG+
Sbjct: 185 CKSRWDKTPSYPAGK 199
>Os01g0973600 Protein of unknown function DUF506, plant family protein
Length = 337
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 93/155 (60%), Gaps = 12/155 (7%)
Query: 155 SVAERNLLADASRIAERCCKGSKGKAEC-RRAVADGLRALGYDAAVCRSRWEKTSSYPAG 213
S+ E +LLA K + A C R + LR GYDAAVC S+W+ P G
Sbjct: 127 SIHESDLLA---------FKRGQCSASCIRHLLVKLLRYSGYDAAVCVSKWQGFDKIPGG 177
Query: 214 EHEYIDAVVGE--EVRLIVEVDFRSEFEVARSTKAYRAALQALPPLFVGTPDRLGQIVAV 271
+HEYID ++ E RLI+++DFRS FE+AR+ +Y + L +LP ++VGT RL Q + V
Sbjct: 178 DHEYIDVIMNSDTEYRLIIDIDFRSHFEIARAVDSYDSLLNSLPVVYVGTLPRLKQFLHV 237
Query: 272 VAEAARQSLKKKGLHFPPWRKPEYMRAKWLSPHVR 306
+ +AA+ SLK+ + PPWR Y++AKW S + R
Sbjct: 238 MVDAAKWSLKQNSMPLPPWRSLPYLQAKWHSKYER 272
>Os01g0879600
Length = 257
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 88/133 (66%), Gaps = 8/133 (6%)
Query: 177 KGKAECRRAVADGLRALGYDAAVCRSRWEKTSSYPAGEHEYIDAVVG--------EEVRL 228
+ ++ +R + LR GYDA++CRS W T+ +P G++EYID +V RL
Sbjct: 62 RKRSSLKRRLMMRLRKDGYDASLCRSSWVATAEHPGGDYEYIDVLVAVGHGADTSSTSRL 121
Query: 229 IVEVDFRSEFEVARSTKAYRAALQALPPLFVGTPDRLGQIVAVVAEAARQSLKKKGLHFP 288
IV+VDFRS+F++AR Y LPP+FVG P++L Q VA++ AA++SL++ GLH P
Sbjct: 122 IVDVDFRSQFQLARPAPWYAHLSSRLPPVFVGPPEKLRQAVALLCMAAQRSLRESGLHVP 181
Query: 289 PWRKPEYMRAKWL 301
PWR+P Y++AKWL
Sbjct: 182 PWRRPSYVQAKWL 194
>Os05g0519300 Protein of unknown function DUF506, plant family protein
Length = 306
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 81/123 (65%), Gaps = 4/123 (3%)
Query: 184 RAVADGLRALGYDAAVCRSRWEKTSSYPAGEHEYIDAVV----GEEVRLIVEVDFRSEFE 239
R +A+ LR GY++A+CRS+W ++ P+GEH Y+D V G+ VR++VE FR EFE
Sbjct: 126 RFLAERLRDAGYNSAICRSKWPRSPEIPSGEHSYVDVVAPTRSGKAVRVVVEPSFRGEFE 185
Query: 240 VARSTKAYRAALQALPPLFVGTPDRLGQIVAVVAEAARQSLKKKGLHFPPWRKPEYMRAK 299
+AR YRA + +LP FVG DRL +V V+ AA+Q ++ G+H PWRK YM AK
Sbjct: 186 MARGGAGYRALVASLPEAFVGRADRLRGVVRVMCAAAKQCARESGMHMAPWRKQRYMEAK 245
Query: 300 WLS 302
WL+
Sbjct: 246 WLA 248
>Os11g0437100
Length = 305
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 85/165 (51%), Gaps = 17/165 (10%)
Query: 160 NLLADASRIAERCCKGSKGKAECRRAVADGLRALGYDAAVCRSRWEKTSSYPAGEHEYID 219
L D +R AE + RRAVA L GYDAAVCR+RW AG +EYID
Sbjct: 80 TLAGDVTRAAEEMAALRGARPAFRRAVASRLSEAGYDAAVCRTRWRAARDVAAGNYEYID 139
Query: 220 AVVGE----------------EVRLIVEVDFRSEFEVARSTKAY-RAALQALPPLFVGTP 262
VV E R IV+V F +EF VAR T Y L ALP + V P
Sbjct: 140 VVVTAVTAAGAGAAKSAAHGAERRYIVDVGFAAEFAVARPTVGYDELVLSALPAILVAPP 199
Query: 263 DRLGQIVAVVAEAARQSLKKKGLHFPPWRKPEYMRAKWLSPHVRS 307
+ V + A+AAR+S+K +GL PPWRK ++ AKWL P+ R+
Sbjct: 200 TVAREAVTLAAKAARRSIKSQGLAVPPWRKKRFVAAKWLGPYRRT 244
>Os01g0747300 Protein of unknown function DUF506, plant family protein
Length = 194
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 75/113 (66%), Gaps = 5/113 (4%)
Query: 194 GYDAAVCRSRWE-KTSSYPAGEHEYIDAVV----GEEVRLIVEVDFRSEFEVARSTKAYR 248
G AA ++ W+ + S EH Y+D VV G+ VR++VE++FR+EFEVAR++ YR
Sbjct: 40 GSGAAESKAFWQNQHSQLHVSEHSYVDVVVQTRSGKAVRVVVELNFRAEFEVARASAEYR 99
Query: 249 AALQALPPLFVGTPDRLGQIVAVVAEAARQSLKKKGLHFPPWRKPEYMRAKWL 301
A + ALP +FVG DRL +V + AA+Q +K+ +H PWRK +YM++KWL
Sbjct: 100 ALVTALPEVFVGRADRLRAVVKAMCAAAKQCMKENNMHMGPWRKHKYMQSKWL 152
>Os02g0720400 Protein of unknown function DUF506, plant family protein
Length = 287
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 82/130 (63%), Gaps = 5/130 (3%)
Query: 182 CRRAVADGLRALGYDAAVCRSRWEKTSSYPAGEHEYID-----AVVGEEVRLIVEVDFRS 236
R+ V + LRA G+DA VCRS WE+T S PAG HEY+D + G R IVEV+
Sbjct: 114 IRKRVVERLRARGFDAGVCRSSWERTGSVPAGSHEYVDVTAAASATGRRARYIVEVNVAG 173
Query: 237 EFEVARSTKAYRAALQALPPLFVGTPDRLGQIVAVVAEAARQSLKKKGLHFPPWRKPEYM 296
EFE+AR + Y+ L +LPP+ V TP+ + A + AA +S++ G+H PPWR+ Y+
Sbjct: 174 EFEIARPSAEYQDLLLSLPPVLVATPEAFRGVAAAMCAAAAESIRGAGMHLPPWRRARYV 233
Query: 297 RAKWLSPHVR 306
+AKW +P+ R
Sbjct: 234 QAKWSAPYER 243
>Os11g0437600 Protein of unknown function DUF506, plant family protein
Length = 306
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 83/131 (63%), Gaps = 6/131 (4%)
Query: 183 RRAVADGLRALGYDAAVCRSRWEKTSSYPAGEHEYIDAVVGEE------VRLIVEVDFRS 236
RRAV LR G+DA +C++RW KTSS AG +EYID VV R IV+V F
Sbjct: 134 RRAVMSLLRERGHDAGLCKARWNKTSSMVAGSYEYIDVVVAAAPDAAEATRYIVDVGFAG 193
Query: 237 EFEVARSTKAYRAALQALPPLFVGTPDRLGQIVAVVAEAARQSLKKKGLHFPPWRKPEYM 296
EFEVAR T+ Y A ALP + V PD + ++V A AAR+SLK++ L PPWRK ++M
Sbjct: 194 EFEVARPTEDYEAVRSALPEVLVARPDDVRKVVRAAASAARRSLKRRRLSVPPWRKRKFM 253
Query: 297 RAKWLSPHVRS 307
AKWL P+ R+
Sbjct: 254 IAKWLGPYRRT 264
>Os01g0915000 Protein of unknown function DUF506, plant family protein
Length = 293
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 76/119 (63%), Gaps = 5/119 (4%)
Query: 194 GYDAAVCRSRWEKTSSYPAGEHEYIDAVV----GEEVRLIVEVDFRSEFEVARSTKAYRA 249
GYDA VC+SRWE + AG +EY+D V G++ R IV+ DFR+ EVAR+T Y
Sbjct: 133 GYDAGVCKSRWEASGGITAGTYEYVDVVAPAARGQKSRYIVDADFRAGLEVARATAEYAV 192
Query: 250 ALQALPPLFVGTPDR-LGQIVAVVAEAARQSLKKKGLHFPPWRKPEYMRAKWLSPHVRS 307
+ A+P V + +G+ V V A+AAR+SL+ GLH PPWRK YM AKWL P+ RS
Sbjct: 193 VVAAVPASVVVAREEAVGRAVRVAADAARRSLRSHGLHVPPWRKTRYMLAKWLGPYKRS 251
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.133 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,836,842
Number of extensions: 303678
Number of successful extensions: 891
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 869
Number of HSP's successfully gapped: 12
Length of query: 405
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 302
Effective length of database: 11,657,759
Effective search space: 3520643218
Effective search space used: 3520643218
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)