Os10g0417800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF506, plant family protein.
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Os10g0417800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF506, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71.33 | 0.397 | 12 | 0.148 | 0.595 | 0.969 | 0.735 | -0.709 | 0.541 | 1.72 | 11.91 | 10 | -- | -- |
| 71.91 | 0.398 | 12 | 0.153 | 0.676 | 0.904 | 0.0114 | -- | 0.528 | 1.6 | 11.91 | 10 | -- | -- |
| 71.73 | 0.397 | 12 | 0.148 | 0.673 | 0.908 | -- | -0.176 | 0.527 | 1.62 | 11.91 | 10 | -- | -- |
| 71.91 | 0.398 | 12 | 0.152 | 0.676 | 0.904 | -- | -- | 0.528 | 1.6 | 11.91 | 10 | -- | -- |
| 79.09 | 0.414 | 12 | 0.148 | -- | 1.36 | -- | -0.241 | 0.556 | -- | 12.1 | 10 | -- | -- |
| 86.08 | 0.435 | 12 | 0.141 | 1.62 | -- | -0.0214 | -- | 0.51 | 0.48 | -- | -- | -- | -- |
| 86.08 | 0.434 | 12 | 0.141 | 1.62 | -- | -- | -- | 0.51 | 0.481 | -- | -- | -- | -- |
| 79.42 | 0.415 | 12 | 0.157 | -- | 1.36 | -- | -- | 0.558 | -- | 12.05 | 10 | -- | -- |
| 72.53 | 0.399 | 12 | -- | 0.682 | 0.901 | -- | -- | 0.511 | 1.6 | 11.91 | 10 | -- | -- |
| 251.28 | 0.741 | 12 | 0.197 | -- | -- | -- | -- | 0.537 | -- | -- | -- | -- | -- |
| 86.61 | 0.435 | 12 | -- | 1.62 | -- | -- | -- | 0.494 | 0.485 | -- | -- | -- | -- |
| 80.07 | 0.417 | 12 | -- | -- | 1.36 | -- | -- | 0.541 | -- | 11.8 | 10 | -- | -- |
| 252.31 | 0.741 | 12 | -- | -- | -- | -- | -- | 0.515 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.55 | radiation | 1 | 10 | < th | dose dependent | sin | 0 | NA |
| 2 | 71.60 | radiation | 1 | 30 | > th | dose independent | sin | 0 | NA |
| 3 | 71.90 | radiation | 10 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 4 | 71.91 | radiation | 10 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 5 | 71.92 | radiation | 10 | 10 | < th | dose dependent | no | NA | NA |
| 6 | 71.94 | radiation | 10 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 8 | 72.01 | radiation | 10 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 10 | 72.16 | radiation | 1 | 30 | < th | dose independent | sin | 0 | NA |
| 27 | 72.98 | radiation | 10 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 30 | 73.06 | radiation | 10 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 41 | 73.42 | radiation | 10 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 43 | 73.51 | radiation | 1 | 30 | < th | dose independent | rect. | 3 | 17 |
| 53 | 73.75 | radiation | 10 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 57 | 73.84 | radiation | 10 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 59 | 73.99 | radiation | 10 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 72 | 74.22 | radiation | 10 | 10 | < th | dose dependent | rect. | 3 | 13 |
| 93 | 74.80 | radiation | 10 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 127 | 75.09 | radiation | 10 | 10 | < th | dose dependent | rect. | 3 | 21 |
| 207 | 75.94 | radiation | 1 | 10 | > th | dose independent | rect. | 17 | 23 |
| 223 | 76.04 | humidity | 70 | 10 | > th | dose dependent | rect. | 3 | 16 |
| 255 | 76.23 | humidity | 50 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 262 | 76.28 | radiation | 10 | 10 | < th | dose dependent | rect. | 3 | 9 |
| 267 | 76.31 | radiation | 1 | 90 | < th | dose independent | rect. | 7 | 12 |
| 291 | 76.51 | radiation | 10 | 10 | < th | dose dependent | rect. | 7 | 13 |
| 293 | 76.53 | humidity | 70 | 10 | > th | dose dependent | rect. | 3 | 14 |
| 294 | 76.54 | humidity | 80 | 10 | > th | dose independent | rect. | 3 | 13 |
| 332 | 76.68 | radiation | 10 | 10 | > th | dose independent | rect. | 9 | 23 |
| 352 | 76.76 | radiation | 1 | 90 | < th | dose independent | rect. | 10 | 9 |
| 358 | 76.77 | radiation | 1 | 90 | < th | dose dependent | rect. | 7 | 12 |
| 368 | 76.81 | radiation | 1 | 10 | < th | dose independent | rect. | 1 | 23 |
| 373 | 76.87 | radiation | 1 | 10 | < th | dose independent | rect. | 3 | 21 |
| 379 | 76.90 | radiation | 1 | 90 | < th | dose dependent | rect. | 10 | 9 |
| 479 | 77.24 | radiation | 1 | 30 | > th | dose independent | rect. | 5 | 13 |
| 534 | 77.34 | wind | 1 | 90 | > th | dose independent | rect. | 3 | 16 |
| 540 | 77.35 | radiation | 1 | 10 | < th | dose dependent | rect. | 11 | 9 |
| 555 | 77.39 | humidity | 70 | 10 | > th | dose dependent | sin | 1 | NA |
| 601 | 77.51 | radiation | 1 | 10 | > th | dose independent | no | NA | NA |
| 602 | 77.51 | radiation | 1 | 10 | < th | dose independent | no | NA | NA |
| 641 | 77.51 | radiation | 1 | 10 | < th | dose independent | rect. | 11 | 21 |
| 666 | 77.51 | radiation | 1 | 10 | < th | dose independent | rect. | 13 | 23 |
| 667 | 77.51 | radiation | 1 | 10 | < th | dose independent | rect. | 15 | 23 |
| 749 | 77.56 | radiation | 1 | 10 | < th | dose independent | rect. | 7 | 23 |
| 759 | 77.59 | wind | 1 | 90 | > th | dose independent | rect. | 15 | 14 |
| 778 | 77.62 | radiation | 1 | 30 | < th | dose independent | rect. | 17 | 23 |
| 779 | 77.62 | radiation | 20 | 10 | < th | dose dependent | rect. | 12 | 8 |
| 829 | 77.69 | radiation | 1 | 10 | < th | dose independent | rect. | 6 | 14 |
| 849 | 77.73 | radiation | 1 | 10 | > th | dose independent | rect. | 5 | 11 |
| 884 | 77.78 | radiation | 1 | 10 | < th | dose independent | rect. | 21 | 23 |
| 899 | 77.81 | radiation | 1 | 30 | < th | dose independent | rect. | 13 | 19 |
| 929 | 77.85 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 15 | 5 |
| 930 | 77.85 | radiation | 1 | 10 | < th | dose dependent | rect. | 13 | 7 |
| 944 | 77.89 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 13 | 6 |