BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0417800 Os10g0417800|AK119634
(301 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G38820.2 | chr2:16222271-16223393 FORWARD LENGTH=311 181 6e-46
AT3G22970.1 | chr3:8152592-8153881 FORWARD LENGTH=371 175 3e-44
AT4G14620.1 | chr4:8389246-8390448 REVERSE LENGTH=342 163 1e-40
AT3G54550.1 | chr3:20193627-20194663 REVERSE LENGTH=289 144 4e-35
AT3G07350.1 | chr3:2347674-2348570 FORWARD LENGTH=299 110 1e-24
AT3G25240.1 | chr3:9192540-9193385 FORWARD LENGTH=282 110 1e-24
AT2G39650.1 | chr2:16528094-16529274 REVERSE LENGTH=292 100 8e-22
AT4G32480.1 | chr4:15676488-15677776 FORWARD LENGTH=288 90 1e-18
AT2G20670.1 | chr2:8912163-8913472 REVERSE LENGTH=295 88 6e-18
AT1G77145.1 | chr1:28990178-28991290 REVERSE LENGTH=261 86 3e-17
AT1G12030.1 | chr1:4064751-4066319 REVERSE LENGTH=296 85 4e-17
AT1G77160.1 | chr1:28995388-28996523 REVERSE LENGTH=264 85 5e-17
AT1G62420.1 | chr1:23102937-23104604 REVERSE LENGTH=284 84 8e-17
>AT2G38820.2 | chr2:16222271-16223393 FORWARD LENGTH=311
Length = 310
Score = 181 bits (458), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 140/267 (52%), Gaps = 20/267 (7%)
Query: 15 RSMLKRLFDRQLLRVSPAERIVA------VGGGEKDEVEPSSVCLDGMVRSFLEDGSGVG 68
+S LKRLF+RQ + +E+ + G + EPSSVCL MV +F+ED +G
Sbjct: 30 KSRLKRLFERQFTNKNVSEKFTGSDVEAPLSRGNSGDFEPSSVCLAKMVLNFMEDNNG-- 87
Query: 69 AAVERAGGHGARRCNCFHGGGXXXXXXXXXXXXXXXXXXXTIKGLVHCATLRERNLLADV 128
+R G RCNCF G G +K LV C ++R RNLL DV
Sbjct: 88 GEKQRCGRS---RCNCFSGSGTESSDDETECSSGEACE--ILKSLVLCKSIRVRNLLTDV 142
Query: 129 CXXXXXXXXXXXXXXXXXXXXXXSLRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPA 188
L + G+DAA+C SRW+KSP+ PAGE+ YVDV++
Sbjct: 143 TKIAETSKNCKLKDGSCLKSVANGLVSLGYDAALCKSRWEKSPSCPAGEYEYVDVIM--- 199
Query: 189 SDRGARERVLVDVDFRSAFEVARPTKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXX 248
+G ER+L+D+DF+S FE+AR TK Y+++LQ LP +FVGK
Sbjct: 200 --KG--ERLLIDIDFKSKFEIARATKTYKSMLQTLPYIFVGKADRLQKIIVLICKAAKQS 255
Query: 249 XXKRGLHLPPWRKPEYMRAKWLSPYDR 275
K+GLH+PPWR+ EY+++KWLS + R
Sbjct: 256 LKKKGLHVPPWRRAEYVKSKWLSSHVR 282
>AT3G22970.1 | chr3:8152592-8153881 FORWARD LENGTH=371
Length = 370
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 135/276 (48%), Gaps = 29/276 (10%)
Query: 15 RSMLKRLFDRQLLRV------SPAERIVAVGGGEKD------EVEPSSVCLDGMVRSFLE 62
+S LKRLFDR V + E+ V GGE E EPSSVCL MV++F+E
Sbjct: 30 KSRLKRLFDRPFTNVLRNSTTTTTEKPFVVTGGEVQCGGVVTEFEPSSVCLAKMVQNFIE 89
Query: 63 DGSGVGAAVERAGGHGARRCNCFHG---GGXXXXXXXXXXXXXXXXXXXTIKGLVHCATL 119
+ + E+ G RCNCF+G G +K L+ C T+
Sbjct: 90 ENN------EKQAKCGRNRCNCFNGNNDGSSDDESDLFGGSIDGCDASDHLKSLIPCTTV 143
Query: 120 RERNLLADVCXXXXXXXXXXXXXXXXXXXXXXSLRAAGHDAAVCVSRWDKSPTHPAGEHA 179
ERNLLAD L + +++++C S+WDKSP+ PAGE+
Sbjct: 144 GERNLLADAAKIVDKNKSVKRKDDMKKIVNE-GLLSLNYNSSICKSKWDKSPSFPAGEYE 202
Query: 180 YVDVLLPPASDRGARERVLVDVDFRSAFEVARPTKAYRALLQRLPAVFVGKXXXXXXXXX 239
Y+DV++ ER+++DVDFRS F++AR T Y+ LLQ LP +FVGK
Sbjct: 203 YIDVII-------GEERLIIDVDFRSEFDIARQTSGYKVLLQSLPFIFVGKSDRLSQIVF 255
Query: 240 XXXXXXXXXXXKRGLHLPPWRKPEYMRAKWLSPYDR 275
K+G+ PPWRK EYMR+KWLS Y R
Sbjct: 256 LISEAAKQSLKKKGMPFPPWRKAEYMRSKWLSSYTR 291
>AT4G14620.1 | chr4:8389246-8390448 REVERSE LENGTH=342
Length = 341
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 129/263 (49%), Gaps = 23/263 (8%)
Query: 15 RSMLKRLFDRQLLRVSPAERIVAVGGG--EKDEVEPSSVCLDGMVRSFLEDGSGVGAAVE 72
+S LKRL DR R+S +E+++ G G E EPS L MV++++E+ + +
Sbjct: 25 KSRLKRLLDRPFTRISNSEKLLISGDGVVAGTEFEPS---LAKMVQNYMEENNDK----Q 77
Query: 73 RAGGHGARRCNCFHGGGXXXXXXXXXXXXXXXXXXXTIKGLVHCATLRERNLLADVCXXX 132
G RCNCF+G K L+ C + E++LL +
Sbjct: 78 TKNGRNTHRCNCFNGNNDISDDELDFFDYD------NFKSLIQCGSFVEKSLLVE-ATKI 130
Query: 133 XXXXXXXXXXXXXXXXXXXSLRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPASDRG 192
L + G+D+++C S+WDK+ + PAGE+ Y+DV++
Sbjct: 131 IEKNKSVKRKDELRKIVVDELSSLGYDSSICKSKWDKTRSIPAGEYEYIDVIV------- 183
Query: 193 ARERVLVDVDFRSAFEVARPTKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKR 252
ER+++D+DFRS FE+AR T Y+ LLQ LP +FVGK K+
Sbjct: 184 NGERLIIDIDFRSEFEIARQTSGYKELLQSLPLIFVGKSDRIRQIVSIVSEASKQSLKKK 243
Query: 253 GLHLPPWRKPEYMRAKWLSPYDR 275
G+H PPWRK +YMRAKWLS Y R
Sbjct: 244 GMHFPPWRKADYMRAKWLSSYTR 266
>AT3G54550.1 | chr3:20193627-20194663 REVERSE LENGTH=289
Length = 288
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 127/266 (47%), Gaps = 21/266 (7%)
Query: 15 RSMLKRLFDRQLLRVSPAERIVAVGGGEKDEVEPSSVCLDGMVRSFLEDGSGVGAAVERA 74
RS LKRLF+R + A ++ +E+EPSSVCL MV++++ED E+
Sbjct: 22 RSRLKRLFERPFSLKNLAGVDSSLSRENSEEIEPSSVCLRRMVQNYIEDPDS-----EKQ 76
Query: 75 GGHGAR-RCNCFHGGGXXXXXXXXXXXXXXXXXXXTIKGLVHCATLRERNLLADVCXXXX 133
R RCNCF G G ++K L+ CA + ER+L
Sbjct: 77 SKCIVRNRCNCFSGSGTDSSDEDDEESSSSRRVLRSLKSLLLCANVSERDLETKT----T 132
Query: 134 XXXXXXXXXXXXXXXXXXSLRAAGHDAAVCVSRWDKSPTH----PAGEHAYVDVLLPPAS 189
L A G+DAA+C SRW+KS T PAG++ Y+DV +
Sbjct: 133 EIVEREVEDKSRLKNVVDELVALGYDAAICKSRWEKSKTKSYCVPAGDYEYLDVNI---- 188
Query: 190 DRGARERVLVDVDFRSAFEVARPTKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXX 249
ERVL+D DF+S FE+AR ++ Y ++ + LP VFVG+
Sbjct: 189 ---GGERVLIDFDFQSKFEIARSSETYESISKTLPYVFVGQVDRLTKVVVFLSKAAKTSF 245
Query: 250 XKRGLHLPPWRKPEYMRAKWLSPYDR 275
K+GL +PPWR+ EY+ KW+S YDR
Sbjct: 246 RKKGLFMPPWRRAEYLLTKWVSQYDR 271
>AT3G07350.1 | chr3:2347674-2348570 FORWARD LENGTH=299
Length = 298
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Query: 153 LRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPASDRGARERVLVDVDFRSAFEVARP 212
LR GH+AA+C ++W S AG H ++DV+ P++ + R +VD+DF S F++ARP
Sbjct: 143 LRELGHNAAICKTKWKSSGGLTAGNHEFIDVVYTPSASSQS-VRFIVDLDFSSRFQIARP 201
Query: 213 TKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGLHLPPWRKPEYMRAKWLSP 272
T Y +LQ LPAVFVGK RGL LPPWRK YM+ +WL P
Sbjct: 202 TSQYARVLQSLPAVFVGKGDDLKRILRLVCDAARISLRNRGLTLPPWRKNRYMQTRWLGP 261
Query: 273 YDR 275
Y R
Sbjct: 262 YKR 264
>AT3G25240.1 | chr3:9192540-9193385 FORWARD LENGTH=282
Length = 281
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 67/123 (54%)
Query: 153 LRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPASDRGARERVLVDVDFRSAFEVARP 212
LR GHDAAVCVS+W S AG + ++DV+ P+ + R LVD+DF S FE+ARP
Sbjct: 123 LRELGHDAAVCVSKWTSSSKLIAGSYHFIDVVHKPSDNDQKAVRYLVDLDFASEFEIARP 182
Query: 213 TKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGLHLPPWRKPEYMRAKWLSP 272
T+ Y LQ LP VFVG RGL LPPWR+ Y++ KW P
Sbjct: 183 TREYTRGLQLLPNVFVGNEENLRTIVRESCDAAKRSMKSRGLSLPPWRRSSYLQHKWFGP 242
Query: 273 YDR 275
Y R
Sbjct: 243 YKR 245
>AT2G39650.1 | chr2:16528094-16529274 REVERSE LENGTH=292
Length = 291
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Query: 153 LRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPASDRGARERVLVDVDFRSAFEVARP 212
LR +G+DAAVC +RW P G++ Y+D++L ++ G +R++VD+DFRS FE+AR
Sbjct: 118 LRLSGYDAAVCSARWQGGGKVPGGDNEYIDIILSD-TEVGQDDRLIVDIDFRSHFEIARA 176
Query: 213 TKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGLHLPPWRKPEYMRAKWLSP 272
+Y+ +++ LP V+VG + + LPPWR Y+R+KW SP
Sbjct: 177 VDSYQRIMESLPVVYVGTVARLNQFLQVMVDAAKFSLKQNSMPLPPWRSLNYLRSKWHSP 236
Query: 273 YDR 275
+ R
Sbjct: 237 HKR 239
>AT4G32480.1 | chr4:15676488-15677776 FORWARD LENGTH=288
Length = 287
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 153 LRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPASDRGARERVLVDVDFRSAFEVARP 212
LR AG+D + S+W S PAGEH Y++V+ S +G RV++++ FR+ FE+AR
Sbjct: 124 LREAGYDCVISKSKWRSSHEIPAGEHEYLEVVDKSVSKKGEI-RVVIELCFRAEFEMARG 182
Query: 213 TKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGLHLPPWRKPEYMRAKWLSP 272
++ Y+ L+ LP V+VGK + +H+ PWRK +YM+AKW
Sbjct: 183 SEEYKRLIGMLPEVYVGKTERLKSLIKILCTAAKKCMKDKKMHMGPWRKHKYMQAKWFGT 242
Query: 273 YDR 275
+R
Sbjct: 243 CER 245
>AT2G20670.1 | chr2:8912163-8913472 REVERSE LENGTH=295
Length = 294
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Query: 156 AGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPASDRGARERVLVDVDFRSAFEVARPTKA 215
AG+D + S+W PAGEH +++++ S + + RV++++ FR+ FE+A+ ++
Sbjct: 129 AGYDCVISKSKWRSCQDIPAGEHEFIEIVDRSGSKK-SEMRVVIELSFRAEFEIAKGSEE 187
Query: 216 YRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGLHLPPWRKPEYMRAKWLSPYDR 275
Y+ L+ RLP V+VGK + +H+ PWRK +YM+AKWL DR
Sbjct: 188 YKRLISRLPEVYVGKTERLRSLIKILCIAGKKCLRDKKMHMAPWRKHKYMQAKWLGTCDR 247
>AT1G77145.1 | chr1:28990178-28991290 REVERSE LENGTH=261
Length = 260
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 11/129 (8%)
Query: 153 LRAAGHDAAVCVSRWDKSPTHPAG--------EHAYVDVLLPPASDR---GARERVLVDV 201
LR+ G+DA++ + WD S H G ++ Y+DV++ S+R +RV++D+
Sbjct: 83 LRSEGYDASLSKTSWDSSFDHREGCRVFRCSRKYEYIDVMVKGDSNRDGVSKLKRVIIDL 142
Query: 202 DFRSAFEVARPTKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGLHLPPWRK 261
DF++ FE+AR T+AY+ + + LP VFV K G+ PPWR
Sbjct: 143 DFKTQFELARQTEAYKDMTEMLPLVFVATEGRLRRVVSLVCGEMKKSMKKEGMSRPPWRT 202
Query: 262 PEYMRAKWL 270
YM++KWL
Sbjct: 203 TRYMQSKWL 211
>AT1G12030.1 | chr1:4064751-4066319 REVERSE LENGTH=296
Length = 295
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 153 LRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPASDRGARERVLVDVDFRSAFEVARP 212
LR G DA +C SRW+K + AG++ YVDV G + R +V+ + FE+ARP
Sbjct: 118 LRNKGFDAGLCKSRWEKFGKNTAGKYEYVDV------KAGDKNRYIVETNLAGEFEIARP 171
Query: 213 TKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGLHLPPWRKPEYMRAKWLSP 272
T Y ++L ++P VFVG + + +PPWR+ YM+AKW
Sbjct: 172 TTRYLSVLAQVPRVFVGTPEELKQLVRIMCFEIRRSMKRADIFVPPWRRNGYMQAKWFGH 231
Query: 273 YDR 275
Y R
Sbjct: 232 YKR 234
>AT1G77160.1 | chr1:28995388-28996523 REVERSE LENGTH=264
Length = 263
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 153 LRAAGHDAAVCVSRWDKSPTHPAG--------EHAYVDVLLPPASDR---GARERVLVDV 201
LR+ G++A++ + WD S H G ++ Y+D ++ SDR +RV++D+
Sbjct: 88 LRSEGYNASLSKTSWDSSFDHREGCRVFTCSRKYEYIDAMVIGDSDRDGVSKLKRVIIDL 147
Query: 202 DFRSAFEVARPTKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGLHLPPWRK 261
DF++ FE+AR T+AY+ + + LP VFV K G+ PPWR
Sbjct: 148 DFKTQFELARQTEAYKDMTEMLPTVFVATEGRLRRVVSLVCGEMKKSMKKEGMSRPPWRT 207
Query: 262 PEYMRAKWL 270
YM++KWL
Sbjct: 208 SRYMQSKWL 216
>AT1G62420.1 | chr1:23102937-23104604 REVERSE LENGTH=284
Length = 283
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 153 LRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPASDRGARERVLVDVDFRSAFEVARP 212
LR G DA +C S W++ + G++ YVDV + R V+ + FE+ARP
Sbjct: 116 LRNKGFDAGLCKSSWERFGKNTGGKYEYVDVRCGGDYNN----RYFVETNLAGEFEIARP 171
Query: 213 TKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGLHLPPWRKPEYMRAKWLSP 272
TK Y ++L ++P VFVG G+H+PPWR+ YM+AKW
Sbjct: 172 TKRYLSILSQVPRVFVGTSEELKLLVRIMCHEMRRSMKHVGIHVPPWRRNGYMQAKWFGF 231
Query: 273 YDR 275
Y R
Sbjct: 232 YKR 234
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.138 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,569,277
Number of extensions: 151175
Number of successful extensions: 399
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 364
Number of HSP's successfully gapped: 13
Length of query: 301
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 203
Effective length of database: 8,419,801
Effective search space: 1709219603
Effective search space used: 1709219603
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 111 (47.4 bits)