BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0417800 Os10g0417800|AK119634
(301 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0417800 Protein of unknown function DUF506, plant fami... 372 e-103
Os03g0162500 Protein of unknown function DUF506, plant fami... 296 2e-80
Os03g0796600 Protein of unknown function DUF506, plant fami... 174 6e-44
Os01g0879600 102 5e-22
Os05g0519300 Protein of unknown function DUF506, plant fami... 101 6e-22
Os01g0973600 Protein of unknown function DUF506, plant fami... 100 1e-21
Os11g0437600 Protein of unknown function DUF506, plant fami... 83 2e-16
Os02g0720400 Protein of unknown function DUF506, plant fami... 82 4e-16
Os01g0747300 Protein of unknown function DUF506, plant fami... 78 6e-15
Os01g0915000 Protein of unknown function DUF506, plant fami... 78 9e-15
Os11g0437100 72 4e-13
>Os10g0417800 Protein of unknown function DUF506, plant family protein
Length = 301
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/261 (76%), Positives = 200/261 (76%)
Query: 15 RSMLKRLFDRQLLRVSPAERIVAVGGGEKDEVEPSSVCLDGMVRSFLEDGSGVGAAVERA 74
RSMLKRLFDRQLLRVSPAERIVAVGGGEKDEVEPSSVCLDGMVRSFLEDGSGVGAAVERA
Sbjct: 15 RSMLKRLFDRQLLRVSPAERIVAVGGGEKDEVEPSSVCLDGMVRSFLEDGSGVGAAVERA 74
Query: 75 GGHGARRCNCFHGGGXXXXXXXXXXXXXXXXXXXTIKGLVHCATLRERNLLADVCXXXXX 134
GGHGARRCNCFHGGG TIKGLVHCATLRERNLLADVC
Sbjct: 75 GGHGARRCNCFHGGGSSDDDDDEDDAAASSDVAETIKGLVHCATLRERNLLADVCGHVER 134
Query: 135 XXXXXXXXXXXXXXXXXSLRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPASDRGAR 194
SLRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPASDRGAR
Sbjct: 135 HRAGGARRRELLGLVAASLRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPASDRGAR 194
Query: 195 ERVLVDVDFRSAFEVARPTKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGL 254
ERVLVDVDFRSAFEVARPTKAYRALLQRLPAVFVGK KRGL
Sbjct: 195 ERVLVDVDFRSAFEVARPTKAYRALLQRLPAVFVGKDDRLRLLVAASADAARASLRKRGL 254
Query: 255 HLPPWRKPEYMRAKWLSPYDR 275
HLPPWRKPEYMRAKWLSPYDR
Sbjct: 255 HLPPWRKPEYMRAKWLSPYDR 275
>Os03g0162500 Protein of unknown function DUF506, plant family protein
Length = 307
Score = 296 bits (757), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/266 (62%), Positives = 179/266 (67%), Gaps = 10/266 (3%)
Query: 15 RSMLKRLFDRQLLRVSPAERIVAVGG-GEKDEV-EPSSVCLDGMVRSFLEDGSGVGAAVE 72
+S LKRLF+RQLLRVSPAER+ +V G GEKDE EPSSVCLDGMVRSFLEDG GV E
Sbjct: 20 KSRLKRLFERQLLRVSPAERLPSVAGVGEKDESSEPSSVCLDGMVRSFLEDGVGV----E 75
Query: 73 RAGGHGARRCNCFHGG---GXXXXXXXXXXXXXXXXXXXTIKGLVHCATLRERNLLADVC 129
R G AR CNCFHGG TIKGLVHCA+LRERNLLADV
Sbjct: 76 RPAG-AARCCNCFHGGEASDDDDDGPAAAEAAATSDAAETIKGLVHCASLRERNLLADVS 134
Query: 130 XXXXXXXXXXXXXXXXXXXXXXSLRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPAS 189
SLRAAGHDAAVC+SRWDKS +HP GEHAY+DVLLPPAS
Sbjct: 135 TLVERHRAAGARKRDLLRLLADSLRAAGHDAAVCISRWDKSSSHPKGEHAYLDVLLPPAS 194
Query: 190 DRGARERVLVDVDFRSAFEVARPTKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXX 249
DR RER+LVDVDFRS FEVARPTKAYRA+LQRLP+VFVGK
Sbjct: 195 DRAERERILVDVDFRSEFEVARPTKAYRAVLQRLPSVFVGKEDRLRLLVAAAADAARASL 254
Query: 250 XKRGLHLPPWRKPEYMRAKWLSPYDR 275
KRGLHLPPWRKPEYMRAKWLSPY+R
Sbjct: 255 KKRGLHLPPWRKPEYMRAKWLSPYER 280
>Os03g0796600 Protein of unknown function DUF506, plant family protein
Length = 405
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 115/278 (41%), Positives = 139/278 (50%), Gaps = 37/278 (13%)
Query: 22 FDRQLLRVSPAERIVAVGG--GEKD-----------EVEPSSVCLDGMVRSFLEDGSGVG 68
F R L+RVS +ER+ G GEK+ EVE SV LD MV SF+ED
Sbjct: 42 FRRLLVRVSASERLAGDGKERGEKEAEKVSASAAGGEVEAGSVGLDRMVLSFMEDS---- 97
Query: 69 AAVERAGGHGARRCNCFHGGGXXXX-----------XXXXXXXXXXXXXXXTIKGLVHCA 117
AAVER RCNCF+G ++KGLV A
Sbjct: 98 AAVERPQRG---RCNCFNGSNYEESDDEEGFFLPSDHSSASAPAAAGDALESLKGLVQSA 154
Query: 118 TLRERNLLADVCXXXXXXXXXXXXXXXXXXXXXXSLRAAGHDAAVCVSRWDKSPTHPAGE 177
++ ERNLLAD LRA G+DAAVC SRW+K+ ++PAGE
Sbjct: 155 SVAERNLLADASRIAERCCKGSKGKAECRRAVADGLRALGYDAAVCRSRWEKTSSYPAGE 214
Query: 178 HAYVDVLLPPASDRGARERVLVDVDFRSAFEVARPTKAYRALLQRLPAVFVGKXXXXXXX 237
H Y+D ++ G R++V+VDFRS FEVAR TKAYRA LQ LP +FVG
Sbjct: 215 HEYIDAVV------GEEVRLIVEVDFRSEFEVARSTKAYRAALQALPPLFVGTPDRLGQI 268
Query: 238 XXXXXXXXXXXXXKRGLHLPPWRKPEYMRAKWLSPYDR 275
K+GLH PPWRKPEYMRAKWLSP+ R
Sbjct: 269 VAVVAEAARQSLKKKGLHFPPWRKPEYMRAKWLSPHVR 306
>Os01g0879600
Length = 257
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 69/120 (57%), Gaps = 2/120 (1%)
Query: 153 LRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLP--PASDRGARERVLVDVDFRSAFEVA 210
LR G+DA++C S W + HP G++ Y+DVL+ +D + R++VDVDFRS F++A
Sbjct: 75 LRKDGYDASLCRSSWVATAEHPGGDYEYIDVLVAVGHGADTSSTSRLIVDVDFRSQFQLA 134
Query: 211 RPTKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGLHLPPWRKPEYMRAKWL 270
RP Y L RLP VFVG + GLH+PPWR+P Y++AKWL
Sbjct: 135 RPAPWYAHLSSRLPPVFVGPPEKLRQAVALLCMAAQRSLRESGLHVPPWRRPSYVQAKWL 194
>Os05g0519300 Protein of unknown function DUF506, plant family protein
Length = 306
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Query: 153 LRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPASDRGARERVLVDVDFRSAFEVARP 212
LR AG+++A+C S+W +SP P+GEH+YVDV+ P S + RV+V+ FR FE+AR
Sbjct: 132 LRDAGYNSAICRSKWPRSPEIPSGEHSYVDVVAPTRSGKAV--RVVVEPSFRGEFEMARG 189
Query: 213 TKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGLHLPPWRKPEYMRAKWLSP 272
YRAL+ LP FVG+ + G+H+ PWRK YM AKWL+
Sbjct: 190 GAGYRALVASLPEAFVGRADRLRGVVRVMCAAAKQCARESGMHMAPWRKQRYMEAKWLAT 249
Query: 273 YDR 275
+R
Sbjct: 250 PER 252
>Os01g0973600 Protein of unknown function DUF506, plant family protein
Length = 337
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 4/123 (3%)
Query: 153 LRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPASDRGARERVLVDVDFRSAFEVARP 212
LR +G+DAAVCVS+W P G+H Y+DV++ + R+++D+DFRS FE+AR
Sbjct: 154 LRYSGYDAAVCVSKWQGFDKIPGGDHEYIDVIM----NSDTEYRLIIDIDFRSHFEIARA 209
Query: 213 TKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGLHLPPWRKPEYMRAKWLSP 272
+Y +LL LP V+VG + + LPPWR Y++AKW S
Sbjct: 210 VDSYDSLLNSLPVVYVGTLPRLKQFLHVMVDAAKWSLKQNSMPLPPWRSLPYLQAKWHSK 269
Query: 273 YDR 275
Y+R
Sbjct: 270 YER 272
>Os11g0437600 Protein of unknown function DUF506, plant family protein
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 67/123 (54%)
Query: 153 LRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPASDRGARERVLVDVDFRSAFEVARP 212
LR GHDA +C +RW+K+ + AG + Y+DV++ A D R +VDV F FEVARP
Sbjct: 141 LRERGHDAGLCKARWNKTSSMVAGSYEYIDVVVAAAPDAAEATRYIVDVGFAGEFEVARP 200
Query: 213 TKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGLHLPPWRKPEYMRAKWLSP 272
T+ Y A+ LP V V + +R L +PPWRK ++M AKWL P
Sbjct: 201 TEDYEAVRSALPEVLVARPDDVRKVVRAAASAARRSLKRRRLSVPPWRKRKFMIAKWLGP 260
Query: 273 YDR 275
Y R
Sbjct: 261 YRR 263
>Os02g0720400 Protein of unknown function DUF506, plant family protein
Length = 287
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 153 LRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPASDRGARERVLVDVDFRSAFEVARP 212
LRA G DA VC S W+++ + PAG H YVDV AS G R R +V+V+ FE+ARP
Sbjct: 122 LRARGFDAGVCRSSWERTGSVPAGSHEYVDVTAA-ASATGRRARYIVEVNVAGEFEIARP 180
Query: 213 TKAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGLHLPPWRKPEYMRAKWLSP 272
+ Y+ LL LP V V G+HLPPWR+ Y++AKW +P
Sbjct: 181 SAEYQDLLLSLPPVLVATPEAFRGVAAAMCAAAAESIRGAGMHLPPWRRARYVQAKWSAP 240
Query: 273 YDR 275
Y+R
Sbjct: 241 YER 243
>Os01g0747300 Protein of unknown function DUF506, plant family protein
Length = 194
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 155 AAGHDAAVCVSRWDKSPTH-PAGEHAYVDVLLPPASDRGARERVLVDVDFRSAFEVARPT 213
++G AA + W + EH+YVDV++ S + R V+V+++FR+ FEVAR +
Sbjct: 38 SSGSGAAESKAFWQNQHSQLHVSEHSYVDVVVQTRSGKAVR--VVVELNFRAEFEVARAS 95
Query: 214 KAYRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGLHLPPWRKPEYMRAKWLSPY 273
YRAL+ LP VFVG+ + +H+ PWRK +YM++KWL
Sbjct: 96 AEYRALVTALPEVFVGRADRLRAVVKAMCAAAKQCMKENNMHMGPWRKHKYMQSKWLGTP 155
Query: 274 DR 275
+R
Sbjct: 156 ER 157
>Os01g0915000 Protein of unknown function DUF506, plant family protein
Length = 293
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 157 GHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPASDRGARERVLVDVDFRSAFEVAR-PTKA 215
G+DA VC SRW+ S AG + YVDV+ P A RG + R +VD DFR+ EVAR +
Sbjct: 133 GYDAGVCKSRWEASGGITAGTYEYVDVVAPAA--RGQKSRYIVDADFRAGLEVARATAEY 190
Query: 216 YRALLQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGLHLPPWRKPEYMRAKWLSPYDR 275
+ +V V + GLH+PPWRK YM AKWL PY R
Sbjct: 191 AVVVAAVPASVVVAREEAVGRAVRVAADAARRSLRSHGLHVPPWRKTRYMLAKWLGPYKR 250
>Os11g0437100
Length = 305
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 153 LRAAGHDAAVCVSRWDKSPTHPAGEHAYVDVLLPPASDRGA----------RERVLVDVD 202
L AG+DAAVC +RW + AG + Y+DV++ + GA R +VDV
Sbjct: 110 LSEAGYDAAVCRTRWRAARDVAAGNYEYIDVVVTAVTAAGAGAAKSAAHGAERRYIVDVG 169
Query: 203 FRSAFEVARPTKAYRAL-LQRLPAVFVGKXXXXXXXXXXXXXXXXXXXXKRGLHLPPWRK 261
F + F VARPT Y L L LPA+ V +GL +PPWRK
Sbjct: 170 FAAEFAVARPTVGYDELVLSALPAILVAPPTVAREAVTLAAKAARRSIKSQGLAVPPWRK 229
Query: 262 PEYMRAKWLSPYDR 275
++ AKWL PY R
Sbjct: 230 KRFVAAKWLGPYRR 243
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.138 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,170,479
Number of extensions: 316525
Number of successful extensions: 982
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 957
Number of HSP's successfully gapped: 11
Length of query: 301
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 201
Effective length of database: 11,814,401
Effective search space: 2374694601
Effective search space used: 2374694601
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 156 (64.7 bits)