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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0437600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF506, plant family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.91 (0.081) R2 : 0.24
β1 : -0.758 (0.32) R2dD : 0.0116 R2D : -0.0278
β2 : 0.448 (0.361) R2dC : 0.00939 R2C : -0.0184
β3 : 0.102 (0.302) R2dE : 0.000694 R2E : -0.03
β4 : 13.2 (1.76) R2dD*C : 0.566 R2D*C : -0.405
β5 : 10.6 (1.55) R2dD*E : 0.471 R2D*E : -0.485
γ1 : 1.39 (0.172) R2dN8 : 0.148 R2N8 : 0.134
σ : 1.51
deviance : 1027.59
__
_____
C
peak time of C : 12
E
wheather : humidity
threshold : 70.17
memory length : 77
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 19
open length of G : 8.3

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
1027.59 1.51 3.91 -0.758 0.448 0.102 13.2 10.6 1.39 12 70.17 77 19 8.3
1114.86 1.57 3.84 0.11 1.71 1.09 2.46 -- 1.56 14.2 60.8 8287 21 11.6
1154.37 1.59 3.83 0.191 0.704 0.312 -- 0.177 1.52 11.5 76 5281 19 7.98
1118.7 1.56 3.89 0.000747 0.108 0.917 -- -- 1.48 11.6 87 15227 19.8 6.65
1132.92 1.57 3.89 0.0894 -- 0.541 -- 3.97 1.51 -- 77 1110 17.5 7.45
1135.81 1.58 3.84 0.0864 0.402 -- 2.31 -- 1.52 12.6 -- -- -- --
1158.02 1.59 3.84 0.171 0.407 -- -- -- 1.53 11.6 -- -- -- --
1104.38 1.55 3.86 0.2 -- 1.8 -- -- 1.79 -- 86 28145 19.8 6.83
1092.78 1.54 3.8 -- 0.36 1.68 -- -- 1.78 12 86.58 27958 19.7 6.83
1168.44 1.6 3.85 0.16 -- -- -- -- 1.52 -- -- -- -- --
1158.79 1.59 3.84 -- 0.405 -- -- -- 1.51 11.6 -- -- -- --
1094.91 1.54 3.8 -- -- 1.68 -- -- 1.78 -- 86.51 27979 21.7 6.85
1169.12 1.6 3.85 -- -- -- -- -- 1.51 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 1034.84 humidity 70.0 90 > th dose independent rect. 19 8
2 1035.86 temperature 30.0 270 < th dose independent rect. 5 21
4 1036.64 temperature 30.0 270 < th dose independent rect. 6 19
6 1037.01 wind 9.0 90 < th dose independent rect. 3 16
8 1038.01 precipitation 0.1 90 < th dose independent rect. 19 8
9 1038.01 precipitation 0.1 90 < th dose dependent rect. 19 8
10 1038.13 temperature 25.0 14400 > th dose dependent rect. 4 1
11 1038.70 temperature 30.0 270 < th dose independent rect. 5 9
13 1039.56 atmosphere 995.0 90 > th dose independent rect. 3 16
14 1039.57 wind 7.0 90 < th dose independent rect. 19 8
16 1041.25 radiation 1.0 90 < th dose dependent rect. 19 8
17 1041.27 temperature 10.0 90 > th dose independent rect. 19 8
18 1041.27 temperature 30.0 90 < th dose independent rect. 19 8
19 1041.27 humidity 50.0 90 > th dose independent rect. 19 8
21 1041.27 atmosphere 995.0 90 > th dose independent rect. 19 8
22 1041.27 radiation 1.0 90 < th dose independent rect. 19 8
27 1041.27 temperature 10.0 90 > th dose independent rect. 3 16
28 1041.27 atmosphere 1015.0 90 < th dose independent rect. 3 16
33 1041.28 precipitation 0.1 90 < th dose independent rect. 3 16
34 1041.28 precipitation 0.1 90 < th dose dependent rect. 3 16
40 1042.53 humidity 60.0 270 > th dose independent rect. 17 8
41 1042.75 temperature 30.0 270 < th dose independent rect. 17 8
43 1043.24 wind 7.0 90 < th dose independent rect. 16 15
44 1043.58 radiation 1.0 270 < th dose independent rect. 17 8
46 1043.63 radiation 1.0 270 < th dose dependent rect. 17 8
50 1045.04 radiation 30.0 14400 < th dose independent rect. 15 17
53 1045.42 radiation 30.0 14400 < th dose independent rect. 15 10
54 1045.45 radiation 30.0 14400 < th dose independent rect. 15 3
71 1046.26 radiation 30.0 14400 > th dose dependent rect. 15 17
74 1046.68 humidity 50.0 90 > th dose dependent rect. 19 8
75 1046.89 wind 3.0 1440 < th dose dependent rect. 14 2
77 1047.01 temperature 25.0 14400 > th dose independent rect. 4 1
81 1047.43 radiation 30.0 14400 > th dose dependent rect. 15 2
102 1048.43 radiation 30.0 14400 > th dose independent rect. 16 16
103 1048.66 temperature 10.0 90 > th dose dependent rect. 3 4
110 1049.69 radiation 20.0 4320 < th dose dependent rect. 18 13
115 1050.03 radiation 30.0 14400 > th dose independent rect. 16 1
134 1050.18 radiation 1.0 4320 > th dose dependent rect. 18 13
136 1050.35 wind 9.0 270 < th dose independent rect. 14 15
139 1050.54 humidity 70.0 10 > th dose independent rect. 19 9
142 1050.65 wind 9.0 270 < th dose independent rect. 1 16
145 1050.75 radiation 10.0 270 < th dose dependent rect. 10 15
147 1050.83 wind 3.0 270 > th dose independent rect. 13 4
150 1051.05 radiation 20.0 4320 < th dose dependent rect. 22 9
151 1051.05 radiation 20.0 4320 < th dose dependent rect. 20 11
153 1051.10 radiation 1.0 4320 > th dose dependent rect. 4 3
164 1051.13 radiation 40.0 4320 < th dose dependent rect. 22 9
165 1051.13 radiation 40.0 4320 < th dose dependent rect. 20 11
171 1051.24 wind 7.0 10 < th dose independent rect. 16 15
172 1051.24 radiation 20.0 4320 < th dose dependent rect. 4 3
183 1051.38 radiation 20.0 4320 < th dose dependent rect. 2 5
187 1051.42 radiation 40.0 4320 > th dose dependent rect. 13 1
191 1051.48 wind 5.0 90 < th dose independent rect. 3 4
198 1051.53 radiation 40.0 4320 > th dose dependent rect. 13 20
200 1051.59 radiation 40.0 4320 > th dose dependent rect. 13 3
255 1052.10 wind 9.0 90 < th dose dependent rect. 3 4
279 1052.27 radiation 30.0 14400 > th dose independent rect. 7 1
300 1052.33 radiation 10.0 14400 > th dose dependent rect. 16 2
331 1052.76 radiation 40.0 90 < th dose independent rect. 15 16
379 1053.24 wind 3.0 270 > th dose independent rect. 12 6
381 1053.27 radiation 40.0 14400 < th dose dependent rect. 16 1
382 1053.29 temperature 25.0 14400 < th dose independent rect. 4 1
387 1053.42 radiation 40.0 14400 < th dose dependent rect. 16 9
391 1053.46 radiation 1.0 90 > th dose independent rect. 7 9
418 1053.59 atmosphere 995.0 270 > th dose independent rect. 1 16
427 1053.64 temperature 30.0 10 < th dose independent rect. 7 21
435 1053.72 radiation 40.0 270 < th dose dependent rect. 6 19
446 1053.86 temperature 10.0 90 > th dose independent rect. 3 4
448 1053.86 temperature 30.0 90 < th dose independent rect. 3 4
449 1053.86 humidity 50.0 90 > th dose independent rect. 3 4
451 1053.86 atmosphere 995.0 90 > th dose independent rect. 3 4
452 1053.86 atmosphere 1015.0 90 < th dose independent rect. 3 4
453 1053.86 radiation 40.0 90 < th dose independent rect. 3 4
454 1053.86 temperature 10.0 90 > th dose independent rect. 7 20
456 1053.87 precipitation 0.1 270 < th dose independent rect. 5 8
457 1053.87 atmosphere 995.0 90 > th dose independent rect. 15 16
458 1053.87 precipitation 0.1 270 < th dose dependent rect. 5 8
480 1054.05 temperature 10.0 270 > th dose independent rect. 5 8
481 1054.05 atmosphere 995.0 270 > th dose independent rect. 5 8
482 1054.05 atmosphere 1015.0 270 < th dose independent rect. 5 8
483 1054.05 temperature 10.0 270 > th dose independent rect. 13 16
488 1054.09 temperature 10.0 270 > th dose independent rect. 17 8
489 1054.09 radiation 20.0 270 < th dose independent rect. 17 8
492 1054.09 temperature 10.0 270 > th dose independent rect. 1 16
493 1054.09 atmosphere 1015.0 270 < th dose independent rect. 1 16
496 1054.10 precipitation 0.1 270 < th dose independent rect. 1 16
497 1054.10 precipitation 0.1 270 < th dose dependent rect. 1 16
548 1054.35 radiation 10.0 4320 > th dose independent rect. 16 16
549 1054.36 radiation 40.0 4320 < th dose dependent rect. 16 16
566 1054.57 precipitation 0.1 90 < th dose independent rect. 3 4
567 1054.57 precipitation 0.1 90 < th dose dependent rect. 3 4
579 1054.74 atmosphere 995.0 270 > th dose independent rect. 13 16
584 1054.83 radiation 40.0 4320 > th dose dependent sin 13 NA
596 1055.07 temperature 10.0 90 > th dose dependent rect. 3 16
598 1055.10 wind 9.0 270 < th dose independent rect. 17 8
605 1055.24 wind 9.0 10 < th dose independent rect. 4 15
613 1055.34 wind 1.0 270 > th dose independent rect. 5 8
616 1055.38 temperature 10.0 270 > th dose dependent rect. 1 17
617 1055.39 temperature 25.0 720 > th dose dependent rect. 17 20
621 1055.47 wind 1.0 90 > th dose independent rect. 3 16
623 1055.49 radiation 10.0 14400 > th dose independent rect. 16 1
629 1055.58 wind 9.0 270 < th dose independent rect. 5 8
631 1055.62 precipitation 0.1 270 < th dose independent rect. 13 16
633 1055.62 precipitation 0.1 270 < th dose dependent rect. 13 16
639 1055.75 humidity 60.0 270 > th dose independent rect. 13 17
667 1055.94 radiation 1.0 270 < th dose independent rect. 10 15
674 1055.99 temperature 10.0 90 > th dose independent rect. 7 8
675 1055.99 atmosphere 1015.0 90 < th dose independent rect. 7 8
677 1056.01 radiation 10.0 270 < th dose independent rect. 6 19
681 1056.05 temperature 25.0 1440 < th dose independent rect. 6 1
689 1056.11 precipitation 0.1 90 < th dose independent rect. 7 20
692 1056.11 precipitation 0.1 90 < th dose dependent rect. 7 20
709 1056.26 temperature 25.0 1440 > th dose independent rect. 6 1
722 1056.33 atmosphere 995.0 270 > th dose independent rect. 17 8
768 1056.75 radiation 1.0 1440 < th dose independent rect. 18 7
775 1056.82 radiation 40.0 90 < th dose dependent rect. 3 4
813 1057.05 radiation 10.0 270 < th dose dependent rect. 6 19
820 1057.12 temperature 25.0 720 > th dose dependent sin 9 NA
849 1057.38 humidity 50.0 10 > th dose dependent rect. 19 9
851 1057.41 radiation 1.0 90 > th dose independent rect. 17 13
902 1057.86 wind 3.0 270 < th dose independent rect. 1 4
905 1057.88 temperature 30.0 270 < th dose independent rect. 17 21
916 1057.99 atmosphere 995.0 10 > th dose independent rect. 4 15
926 1058.06 radiation 10.0 4320 < th dose independent rect. 22 9
927 1058.06 radiation 10.0 4320 < th dose independent rect. 20 11
936 1058.15 wind 9.0 270 < th dose dependent rect. 1 5
940 1058.21 radiation 10.0 4320 < th dose independent rect. 5 2
949 1058.31 temperature 10.0 270 > th dose dependent rect. 13 16
953 1058.37 temperature 10.0 10 > th dose dependent rect. 16 15
959 1058.40 radiation 10.0 4320 < th dose independent rect. 2 5
994 1058.60 wind 9.0 90 < th dose independent rect. 7 20