Os01g0747300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF506, plant family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0747300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF506, plant family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 194.42 | 0.655 | 10.7 | -2.91 | 2.46 | 1.37 | 2.4 | 1.46 | -0.254 | 14.2 | 19.41 | 2234 | -- | -- |
| 197.83 | 0.655 | 10.7 | -2.68 | 2.47 | 1.13 | 2.52 | -- | -0.2 | 14.2 | 19.5 | 2228 | -- | -- |
| 215.35 | 0.683 | 10.7 | -2.93 | 2.47 | 1.42 | -- | 1.89 | -0.26 | 14.3 | 19.4 | 2189 | -- | -- |
| 220.58 | 0.692 | 10.7 | -2.67 | 2.5 | 1.09 | -- | -- | -0.209 | 14.2 | 19.4 | 1990 | -- | -- |
| 569.54 | 1.11 | 10.7 | -2.92 | -- | 1.88 | -- | 2.31 | -0.203 | -- | 19.4 | 2362 | -- | -- |
| 218.68 | 0.693 | 10.7 | -3.22 | 2.52 | -- | 2.46 | -- | -0.439 | 14.1 | -- | -- | -- | -- |
| 241.37 | 0.728 | 10.7 | -3.15 | 2.53 | -- | -- | -- | -0.425 | 14.2 | -- | -- | -- | -- |
| 564.24 | 1.11 | 10.7 | -2.79 | -- | 1.25 | -- | -- | -0.0992 | -- | 21.8 | 1013 | -- | -- |
| 262.6 | 0.755 | 10.5 | -- | 2.5 | 2.46 | -- | -- | 0.513 | 14.2 | 18.41 | 47520 | -- | -- |
| 622.55 | 1.17 | 10.7 | -3.25 | -- | -- | -- | -- | -0.485 | -- | -- | -- | -- | -- |
| 502.48 | 1.05 | 10.6 | -- | 2.59 | -- | -- | -- | -0.074 | 14.2 | -- | -- | -- | -- |
| 633.71 | 1.17 | 10.5 | -- | -- | 2.59 | -- | -- | 0.498 | -- | 18.42 | 47520 | -- | -- |
| 901.77 | 1.4 | 10.7 | -- | -- | -- | -- | -- | -0.124 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 183.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 10 |
| 8 | 184.19 | temperature | 25 | 90 | < th | dose independent | rect. | 6 | 10 |
| 15 | 185.42 | temperature | 25 | 10 | < th | dose independent | rect. | 7 | 9 |
| 44 | 186.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 3 |
| 64 | 187.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 11 |
| 74 | 188.16 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 13 |
| 84 | 188.40 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 10 |
| 94 | 188.79 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 6 |
| 126 | 189.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 22 | 14 |
| 183 | 190.51 | temperature | 25 | 720 | < th | dose dependent | sin | 6 | NA |
| 211 | 190.94 | temperature | 15 | 90 | > th | dose dependent | rect. | 4 | 17 |
| 235 | 191.34 | temperature | 20 | 720 | > th | dose independent | rect. | 24 | 6 |
| 244 | 191.44 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 7 |
| 256 | 191.55 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 18 |
| 286 | 191.87 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 14 |
| 302 | 192.04 | humidity | 80 | 720 | > th | dose independent | rect. | 17 | 3 |
| 303 | 192.04 | temperature | 25 | 270 | < th | dose dependent | sin | 2 | NA |
| 304 | 192.05 | temperature | 20 | 720 | > th | dose independent | sin | 6 | NA |
| 357 | 192.49 | humidity | 70 | 720 | > th | dose dependent | rect. | 18 | 2 |
| 371 | 192.62 | temperature | 20 | 720 | < th | dose independent | sin | 6 | NA |
| 394 | 192.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 21 |
| 445 | 193.11 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 16 |
| 488 | 193.40 | temperature | 25 | 90 | < th | dose independent | rect. | 9 | 7 |
| 551 | 193.82 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 592 | 193.99 | temperature | 15 | 10 | > th | dose dependent | rect. | 2 | 20 |
| 688 | 194.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 777 | 195.13 | temperature | 25 | 90 | < th | dose independent | rect. | 22 | 18 |
| 802 | 195.25 | humidity | 70 | 720 | > th | dose dependent | rect. | 14 | 15 |
| 880 | 195.61 | radiation | 10 | 1440 | < th | dose independent | rect. | 14 | 8 |
| 895 | 195.64 | radiation | 10 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 909 | 195.69 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 963 | 195.88 | radiation | 10 | 1440 | < th | dose independent | rect. | 12 | 10 |
| 970 | 195.90 | radiation | 10 | 1440 | < th | dose independent | rect. | 12 | 7 |