Os07g0181500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF506, plant family protein.
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Os07g0181500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF506, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.57 | 0.606 | 11.1 | 1.71 | 1.53 | 1.45 | 0.221 | -0.681 | 1.18 | 2.24 | 25.19 | 9 | -- | -- |
| 164.87 | 0.603 | 11.1 | 1.74 | 1.61 | 1.38 | -0.47 | -- | 1.18 | 2.14 | 25.19 | 9 | -- | -- |
| 163.72 | 0.601 | 11.1 | 1.73 | 1.57 | 1.39 | -- | -0.549 | 1.19 | 2.27 | 22.85 | 5 | -- | -- |
| 165.25 | 0.603 | 11.1 | 1.75 | 1.57 | 1.39 | -- | -- | 1.19 | 2.26 | 22.85 | 5 | -- | -- |
| 224.49 | 0.698 | 11.1 | 1.74 | -- | 2.32 | -- | -0.567 | 1.2 | -- | 18.95 | 5 | -- | -- |
| 205.2 | 0.672 | 11.1 | 1.66 | 2.78 | -- | -0.278 | -- | 1.17 | 1.19 | -- | -- | -- | -- |
| 205.52 | 0.671 | 11.1 | 1.67 | 2.78 | -- | -- | -- | 1.17 | 1.2 | -- | -- | -- | -- |
| 220.29 | 0.691 | 11.1 | 1.73 | -- | 2.41 | -- | -- | 1.29 | -- | 19.76 | 76 | -- | -- |
| 245.64 | 0.734 | 11.2 | -- | 1.7 | 1.27 | -- | -- | 0.991 | 2.13 | 22.85 | 5 | -- | -- |
| 682.34 | 1.22 | 11.1 | 1.78 | -- | -- | -- | -- | 1.23 | -- | -- | -- | -- | -- |
| 279.4 | 0.782 | 11.2 | -- | 2.8 | -- | -- | -- | 0.987 | 1.22 | -- | -- | -- | -- |
| 289.85 | 0.793 | 11.1 | -- | -- | 2.29 | -- | -- | 1.11 | -- | 10.01 | 130 | -- | -- |
| 766.04 | 1.29 | 11.1 | -- | -- | -- | -- | -- | 1.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 165.63 | radiation | 30 | 10 | < th | dose dependent | rect. | 3 | 19 |
| 3 | 165.98 | radiation | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 4 | 166.62 | radiation | 10 | 10 | < th | dose dependent | sin | 23 | NA |
| 10 | 167.27 | radiation | 30 | 10 | < th | dose dependent | rect. | 16 | 22 |
| 13 | 167.55 | radiation | 20 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 19 | 167.72 | radiation | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 21 | 167.76 | radiation | 30 | 10 | < th | dose dependent | no | NA | NA |
| 22 | 167.88 | radiation | 30 | 30 | < th | dose dependent | sin | 22 | NA |
| 24 | 167.89 | wind | 1 | 90 | > th | dose independent | rect. | 3 | 18 |
| 28 | 168.18 | radiation | 20 | 30 | < th | dose independent | rect. | 3 | 19 |
| 33 | 168.49 | radiation | 30 | 10 | < th | dose dependent | rect. | 8 | 14 |
| 37 | 168.81 | radiation | 30 | 10 | < th | dose dependent | rect. | 10 | 12 |
| 75 | 169.98 | radiation | 20 | 30 | < th | dose independent | rect. | 10 | 12 |
| 82 | 170.11 | radiation | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 92 | 170.30 | radiation | 20 | 30 | < th | dose independent | rect. | 8 | 14 |
| 99 | 170.44 | radiation | 30 | 10 | < th | dose dependent | rect. | 16 | 20 |
| 131 | 171.09 | radiation | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 204 | 172.19 | wind | 1 | 270 | > th | dose independent | rect. | 1 | 19 |
| 221 | 172.46 | humidity | 90 | 10 | < th | dose dependent | rect. | 6 | 10 |
| 231 | 172.63 | radiation | 10 | 90 | > th | dose independent | rect. | 9 | 7 |
| 251 | 172.85 | radiation | 10 | 10 | > th | dose independent | rect. | 9 | 23 |
| 253 | 172.90 | wind | 1 | 270 | > th | dose independent | rect. | 24 | 9 |
| 260 | 172.98 | radiation | 1 | 30 | > th | dose dependent | rect. | 9 | 23 |
| 292 | 173.32 | radiation | 20 | 30 | < th | dose independent | rect. | 23 | 23 |
| 293 | 173.32 | radiation | 1 | 30 | > th | dose dependent | sin | 21 | NA |
| 302 | 173.44 | humidity | 90 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 308 | 173.51 | radiation | 10 | 10 | > th | dose independent | sin | 21 | NA |
| 309 | 173.51 | radiation | 1 | 10 | > th | dose independent | sin | 23 | NA |
| 333 | 173.73 | radiation | 1 | 30 | > th | dose dependent | rect. | 5 | 11 |
| 347 | 173.75 | radiation | 40 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 358 | 173.88 | radiation | 1 | 10 | < th | dose independent | sin | 23 | NA |
| 469 | 174.51 | radiation | 1 | 30 | > th | dose dependent | no | NA | NA |
| 526 | 174.52 | humidity | 70 | 10 | > th | dose independent | rect. | 3 | 18 |
| 534 | 174.55 | radiation | 1 | 30 | > th | dose dependent | rect. | 7 | 23 |
| 538 | 174.61 | radiation | 1 | 30 | > th | dose dependent | rect. | 7 | 9 |
| 555 | 174.78 | radiation | 40 | 270 | < th | dose independent | rect. | 24 | 10 |
| 589 | 175.06 | radiation | 20 | 10 | < th | dose independent | rect. | 16 | 22 |
| 594 | 175.07 | radiation | 20 | 30 | < th | dose independent | sin | 21 | NA |
| 608 | 175.12 | temperature | 10 | 10 | > th | dose dependent | rect. | 22 | 18 |
| 705 | 175.26 | radiation | 10 | 270 | > th | dose independent | rect. | 9 | 5 |
| 723 | 175.38 | humidity | 90 | 10 | < th | dose dependent | rect. | 22 | 18 |
| 816 | 175.73 | radiation | 1 | 90 | > th | dose independent | sin | 0 | NA |
| 820 | 175.76 | humidity | 90 | 10 | < th | dose dependent | rect. | 24 | 16 |
| 854 | 175.92 | radiation | 1 | 90 | < th | dose independent | sin | 0 | NA |
| 862 | 175.98 | radiation | 1 | 30 | > th | dose dependent | rect. | 9 | 7 |
| 871 | 176.03 | radiation | 10 | 90 | > th | dose independent | rect. | 7 | 9 |
| 893 | 176.20 | humidity | 80 | 10 | < th | dose independent | rect. | 9 | 7 |
| 896 | 176.20 | radiation | 1 | 30 | > th | dose dependent | rect. | 9 | 21 |
| 908 | 176.27 | humidity | 50 | 10 | > th | dose dependent | rect. | 3 | 18 |
| 912 | 176.30 | atmosphere | 995 | 90 | > th | dose independent | rect. | 3 | 18 |
| 925 | 176.37 | humidity | 80 | 90 | > th | dose independent | rect. | 21 | 6 |
| 974 | 176.52 | radiation | 1 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 996 | 176.67 | wind | 7 | 270 | < th | dose independent | rect. | 24 | 9 |