BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0181500 Os07g0181500|AK072431
         (213 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G22970.1  | chr3:8152592-8153881 FORWARD LENGTH=371             54   5e-08
AT4G14620.1  | chr4:8389246-8390448 REVERSE LENGTH=342             47   6e-06

>AT3G22970.1 | chr3:8152592-8153881 FORWARD LENGTH=371
          Length = 370

 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 132 LKGLVQSASMAERNLLADASRIAERCRKGGKKKADVRCXXXXXXXXXXXXXXXCKSRWDK 191
           LK L+   ++ ERNLLADA++I ++  K  K+K D++                CKS+WDK
Sbjct: 134 LKSLIPCTTVGERNLLADAAKIVDK-NKSVKRKDDMKKIVNEGLLSLNYNSSICKSKWDK 192

Query: 192 TPSYPAGKL 200
           +PS+PAG+ 
Sbjct: 193 SPSFPAGEY 201



>AT4G14620.1 | chr4:8389246-8390448 REVERSE LENGTH=342
          Length = 341

 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 132 LKGLVQSASMAERNLLADASRIAERCRKGGKKKADVRCXXXXXXXXXXXXXXXCKSRWDK 191
            K L+Q  S  E++LL +A++I E+  K  K+K ++R                CKS+WDK
Sbjct: 109 FKSLIQCGSFVEKSLLVEATKIIEK-NKSVKRKDELRKIVVDELSSLGYDSSICKSKWDK 167

Query: 192 TPSYPAGK 199
           T S PAG+
Sbjct: 168 TRSIPAGE 175



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.133    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,143,452
Number of extensions: 40405
Number of successful extensions: 91
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 92
Number of HSP's successfully gapped: 2
Length of query: 213
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 119
Effective length of database: 8,529,465
Effective search space: 1015006335
Effective search space used: 1015006335
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 109 (46.6 bits)