BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0668400 Os03g0668400|AK119454
(306 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0668400 Protein of unknown function DUF860, plant fami... 605 e-173
Os03g0667400 Similar to Iron regulated metal transporter 190 1e-48
Os01g0293200 Protein of unknown function DUF860, plant fami... 105 3e-23
Os03g0181400 Protein of unknown function DUF860, plant fami... 104 6e-23
Os11g0544300 Protein of unknown function DUF860, plant fami... 103 1e-22
Os05g0571100 Protein of unknown function DUF860, plant fami... 102 3e-22
Os03g0646200 Protein of unknown function DUF860, plant fami... 83 3e-16
Os09g0473400 Protein of unknown function DUF860, plant fami... 76 3e-14
Os01g0617600 Protein of unknown function DUF860, plant fami... 76 3e-14
Os02g0526600 Protein of unknown function DUF860, plant fami... 74 1e-13
>Os03g0668400 Protein of unknown function DUF860, plant family protein
Length = 306
Score = 605 bits (1560), Expect = e-173, Method: Compositional matrix adjust.
Identities = 296/306 (96%), Positives = 296/306 (96%)
Query: 1 MMAIRLEEHVSLISKTLPFIQHKAMSSYSTGHGHRPKKKLYHREPGLDKAMDLQKKPAXX 60
MMAIRLEEHVSLISKTLPFIQHKAMSSYSTGHGHRPKKKLYHREPGLDKAMDLQKKPA
Sbjct: 1 MMAIRLEEHVSLISKTLPFIQHKAMSSYSTGHGHRPKKKLYHREPGLDKAMDLQKKPALL 60
Query: 61 XXXXXXXXSQKTNSILIRYLEKEVGFVQKWNFLSLIKRHPNIFFVSGGSASREPISVTLT 120
SQKTNSILIRYLEKEVGFVQKWNFLSLIKRHPNIFFVSGGSASREPISVTLT
Sbjct: 61 LRLRELILSQKTNSILIRYLEKEVGFVQKWNFLSLIKRHPNIFFVSGGSASREPISVTLT 120
Query: 121 EKAKKISSEETLARELMEPILVKNLRKLLMMSLDCQIPIEKIELIQSELGLPKNFKSNLI 180
EKAKKISSEETLARELMEPILVKNLRKLLMMSLDCQIPIEKIELIQSELGLPKNFKSNLI
Sbjct: 121 EKAKKISSEETLARELMEPILVKNLRKLLMMSLDCQIPIEKIELIQSELGLPKNFKSNLI 180
Query: 181 PRYPELFSVREVKGLDHLCLESWDSSLAVTAREEKLNFDGFHMDCRGIPKDGNVFGPFAF 240
PRYPELFSVREVKGLDHLCLESWDSSLAVTAREEKLNFDGFHMDCRGIPKDGNVFGPFAF
Sbjct: 181 PRYPELFSVREVKGLDHLCLESWDSSLAVTAREEKLNFDGFHMDCRGIPKDGNVFGPFAF 240
Query: 241 KLKYPAGFRPNRKYLEEVVRWQKLAFPSPYLNARRVEPATPQARKRAVAVMHEILSLTME 300
KLKYPAGFRPNRKYLEEVVRWQKLAFPSPYLNARRVEPATPQARKRAVAVMHEILSLTME
Sbjct: 241 KLKYPAGFRPNRKYLEEVVRWQKLAFPSPYLNARRVEPATPQARKRAVAVMHEILSLTME 300
Query: 301 RRLTSD 306
RRLTSD
Sbjct: 301 RRLTSD 306
>Os03g0667400 Similar to Iron regulated metal transporter
Length = 175
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 88/97 (90%), Positives = 92/97 (94%)
Query: 210 TAREEKLNFDGFHMDCRGIPKDGNVFGPFAFKLKYPAGFRPNRKYLEEVVRWQKLAFPSP 269
TAREEKLNF+GF MD RGIPKDGN+ GPFAF+LKYPAGFRPNR YLEEVVRWQKLAFPSP
Sbjct: 1 TAREEKLNFEGFQMDYRGIPKDGNIVGPFAFRLKYPAGFRPNRNYLEEVVRWQKLAFPSP 60
Query: 270 YLNARRVEPATPQARKRAVAVMHEILSLTMERRLTSD 306
YLNARRVEPATPQARKRAVAV+HEILSLTM RRLTSD
Sbjct: 61 YLNARRVEPATPQARKRAVAVLHEILSLTMNRRLTSD 97
>Os01g0293200 Protein of unknown function DUF860, plant family protein
Length = 517
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 131/273 (47%), Gaps = 25/273 (9%)
Query: 41 YHREPGLDKAMDLQKKPAXXXXXXXXXXSQKTNSILIRYLEKEVGFVQKWNFL-SLIKRH 99
+ R+ LD A+ ++ +L+RYL K ++ + + ++R+
Sbjct: 32 WRRDAALDAAILRDRRYRLASRLVREVLLSPGRRLLLRYLSKRRQRIRLPVLVPTFLRRY 91
Query: 100 PNIFFVS---GGSASREPISVTLTEKAKKISSEETLARELMEPILVKNLRKLLMMSLDCQ 156
P + VS AS P ++ E A + + L P+L L KLLM+S
Sbjct: 92 PTLLSVSPPPNPVASPSPHLLSFLEFASRHHA-------LHSPLLASRLAKLLMISSTRA 144
Query: 157 IPIEKIELIQSELGLPKNFKSNLIPRYPELFSVREVKGLD-----HLCLESWDSSLAVTA 211
+P+ KI + + GLP +F ++L+PRYP LF + G D L L SWD LA +
Sbjct: 145 LPVPKIAAAKRDFGLPDDFLTSLVPRYPHLFRLVGDPGPDASGNAFLELVSWDDQLAKSV 204
Query: 212 REEKLNFDGFHMDCRGIPKDGNVFGPFAFKLKYPAGFRPNRKYLEEVVRWQKLAFPSPYL 271
E + + + D GI N F +K P GF ++ E V W +L + SPY
Sbjct: 205 IELRADKEA---DVVGIRPRPN------FTVKLPRGFYLKKEMREWVRDWLELPYVSPYA 255
Query: 272 NARRVEPATPQARKRAVAVMHEILSLTMERRLT 304
+ + PA+P+A KR + V+HE+LSL++ERR+
Sbjct: 256 DTSGLHPASPEAEKRLIGVLHEVLSLSVERRMA 288
>Os03g0181400 Protein of unknown function DUF860, plant family protein
Length = 421
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 119/244 (48%), Gaps = 28/244 (11%)
Query: 80 LEKEVGFVQKWNFLSLIKRHPNIFFVSGGSASREPISVTLTEKAKKISSEETLARELMEP 139
L ++G + + R P +F V SR + L+ +A+ + EE E
Sbjct: 55 LRPQLGLTKPNKVAHFVSRSPQLFEVC--RDSRGVMWAGLSPQAEALIEEEARLLEDHSR 112
Query: 140 ILVKNLRKLLMMSLDCQIPIEKIELIQSELGLPKNFKSNLIPRYPELFSVREVKGLDHLC 199
+ + +LLMMS+D ++ I+KI + ++GLP +FK+ + +PE F V ++ D+L
Sbjct: 113 TAAEYVTRLLMMSVDRRLAIDKIAHFRRDMGLPHDFKTRWVHMFPEQFRVVRLEDGDYLE 172
Query: 200 LESWDSSLAVTAREEKLNFDGFHMDCRGIPKDGNVFG--------PFAFKLKYPAGFRPN 251
L SW+ + AVT E+K + D N G +F +K+P F
Sbjct: 173 LVSWNPNWAVTELEKK---------TAALTGDANANGIGSPPGELSLSFPMKFPPNFTSY 223
Query: 252 RKYLEEV---------VRWQKLAFPSPYLNARRVEPATPQARKRAVAVMHEILSLTMERR 302
K+ +V ++QK + PY AR + P +P+ KRAVAVMHE+L+ T+E+R
Sbjct: 224 YKFYGKVHHYVKKGNTEQFQKTTYLYPYSEARGLTPGSPEFDKRAVAVMHEVLNFTLEKR 283
Query: 303 LTSD 306
L D
Sbjct: 284 LVID 287
>Os11g0544300 Protein of unknown function DUF860, plant family protein
Length = 467
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 18/239 (7%)
Query: 80 LEKEVGFVQKWNFLSLIKRHPNIFFVSGGSASREPISVTLTEKAKKISSEETLARELMEP 139
L ++G + ++R P +F V SR + L+ +A+ + EE E
Sbjct: 101 LRSQLGLTKPNKVAHFVRRSPQLFEVC--RDSRGVMWAGLSPQAEALVEEEARLLEDHSR 158
Query: 140 ILVKNLRKLLMMSLDCQIPIEKIELIQSELGLPKNFKSNLIPRYPELFSVREVKGLDHLC 199
+ + +LLM+S+D ++ I+KI + ++GLP +FK+ + +PE F V ++ D+L
Sbjct: 159 TAAEYVTRLLMISVDRRLAIDKIAHFRRDMGLPHDFKTRWVHMFPEQFRVVRLEDGDYLE 218
Query: 200 LESWDSSLAVTAREEK---LNFDGFHMDCRGIPKDGNVFGPFAFKLKYPAGFRPNRKYLE 256
L SW+ + AVT E+K L D D P + ++ +F +K+P F K+
Sbjct: 219 LVSWNPNWAVTELEKKTAALTGDANANDIASPPGELSL----SFPMKFPPNFTSYYKFRG 274
Query: 257 EV---------VRWQKLAFPSPYLNARRVEPATPQARKRAVAVMHEILSLTMERRLTSD 306
+V ++QK + SPY + P +P+ KRAVAVMHEIL+ T+E+RL +D
Sbjct: 275 KVHHYVKKGNTEQFQKTTYLSPYAEPGGLTPGSPEFDKRAVAVMHEILNFTLEKRLVTD 333
>Os05g0571100 Protein of unknown function DUF860, plant family protein
Length = 509
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 119/227 (52%), Gaps = 8/227 (3%)
Query: 82 KEVGFVQKWNFLSLIKRHPNIF-FVSGGSASREPISVTLTEKAKKISSEETLARELMEPI 140
+++G +K ++L+KR P +F V G S + LT A+++ +E + E +
Sbjct: 107 RDLGLTRKRRLIALLKRFPGVFEVVEEGVYS---LRFRLTPAAERLYLDELHLKNESEGL 163
Query: 141 LVKNLRKLLMMSLDCQIPIEKIELIQSELGLPKNFKSNLIPRYPELFSVREVKGLDHLCL 200
V LRKLLMMS D +I IEKI ++++LGLP F+ + RYP+ F V ++ L L
Sbjct: 164 AVTKLRKLLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLEL 223
Query: 201 ESWDSSLAVTAREEKLNFDGFHMDCRGIPKDGNVFGPFAF-KLKYPAGFRPNRKYLEEVV 259
WD LAV+A E + ++ + P F ++K P G + +R V
Sbjct: 224 THWDPELAVSAAEVAEE---ENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVA 280
Query: 260 RWQKLAFPSPYLNARRVEPATPQARKRAVAVMHEILSLTMERRLTSD 306
+++++ + SPY + + + + K A V+HEILSLT+E+R D
Sbjct: 281 QFKEMPYISPYSDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVD 327
>Os03g0646200 Protein of unknown function DUF860, plant family protein
Length = 446
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 12/201 (5%)
Query: 103 FFVSGGSASREPISVTLTEKAKKISSEETLARELMEPILVKNLRKLLMMSLDCQIPIEKI 162
+ S + S P++V+ T + I S E + L +LLM++ +P+ +
Sbjct: 90 LYTSAFALSPHPVAVSPTPRLAGIHSAEAQVLDSTRADAADRLLRLLMLAPARALPLHLV 149
Query: 163 ELIQSELGLPKNFKSNLIPRYPELFSVREVKGLDHLCLESWDSSLAVTAREEKLNFDGFH 222
++ +LGL +F +L+P YP+ F++ L L L + LAV+A + G +
Sbjct: 150 ARLRLDLGLAPDFPRSLLPNYPDYFALSRDGAL--LELVCYRKDLAVSAMQSYAQRTGGY 207
Query: 223 MDCRGIPKDGNVFGPFAFKLKYPAGFRPNRKYLEEVVRWQKLAFPSPYLNARRVEPATPQ 282
+P F L +P GF ++K + + WQ+L + SPY + + P +
Sbjct: 208 KVGDAVP----------FPLSFPRGFELDKKVRKWLDDWQRLPYISPYEDGSHLTPRSDI 257
Query: 283 ARKRAVAVMHEILSLTMERRL 303
KR AV+HE+LSLT+ +++
Sbjct: 258 TEKRTAAVLHEVLSLTVGKKM 278
>Os09g0473400 Protein of unknown function DUF860, plant family protein
Length = 399
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 24/228 (10%)
Query: 80 LEKEVGFVQKWNFLSLIKRHPNIFFV----SGGSASREPISVTLTEKAKKISSEETLARE 135
L +E+GF + + RHP +F + S + P+ +L E+ +++ +
Sbjct: 106 LYRELGFPRGRSVSRAAARHPLLFHLPRVDSVPHLALTPLMCSLLEEERRLHDQ------ 159
Query: 136 LMEPILVKNLRKLLMMSLDCQIPIEKIELIQSELGLPKNFKSNLIPRYPELFSVR-EVKG 194
+ P V+ +RKLLM++ +IP+ K+ ++ LGLP +F+ + +P F V + G
Sbjct: 160 -LLPTRVRAVRKLLMLADHRRIPLAKLHHCRAVLGLPDDFRDR-VREFPGDFRVAVDPDG 217
Query: 195 LDHLCLESWDSSLAVTAREEKLNFDGFHMDCRGIPKDGNVFGPFAFKLKYPAGFRPNRKY 254
D L L WD +LAV+A E D + V F F + + + +
Sbjct: 218 RDVLELARWDPALAVSALERDFVVD-----------ERRVRRTFRFAVPHSRSMPLDAED 266
Query: 255 LEEVVRWQKLAFPSPYLNARRVEPATPQARKRAVAVMHEILSLTMERR 302
+ + SPY + + P TP+A K V V+HE LSLT+E+R
Sbjct: 267 ADRLDAATTFPLVSPYTSGALLRPWTPEAEKYRVGVVHEFLSLTLEKR 314
>Os01g0617600 Protein of unknown function DUF860, plant family protein
Length = 466
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 139 PILVKNLRKLLMMSL-DCQIPIEKIELIQSELGLPKNFKSNLIPRYPELFSVREVKGLDH 197
P + +RKLL+++ ++ +E I L++ +LGLP +F ++I +P LF + + ++
Sbjct: 159 PASIVRIRKLLLLAPPHHRLRLEHIRLLRRDLGLPDDFAESIIQAHPALFRLTPDQFVEF 218
Query: 198 LCLESWDSSLAVTAREEKLNFDGFHMDCRGIPKDGNVFGPFAFKLKYPAGFRPNRKYLEE 257
+ S L+V A E H P G FAF ++P GF+ + +
Sbjct: 219 VPSPSDPPGLSVAAVERAREQ---HYREHRNPGAGEEDVRFAFPTRFPPGFKIGKYFRIA 275
Query: 258 VVRWQKLAFPSPYLNARRVEPATPQAR----KRAVAVMHEILSLTMERRLT 304
V +WQ+L + SPY + + + +AR KRAVA +HE+LSLT+E+R T
Sbjct: 276 VWKWQRLPYASPYADVSGHDLRSLEARRRMEKRAVAAVHELLSLTVEKRTT 326
>Os02g0526600 Protein of unknown function DUF860, plant family protein
Length = 386
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 108/211 (51%), Gaps = 19/211 (9%)
Query: 94 SLIKRHPNIFFVSGGSASREPISVTLTEKAKKISSEETLARELMEPILVKNLRKLLMMSL 153
+ + R+ +F + G V+LT+ A + E EP LV LR+LLM++L
Sbjct: 87 AFLARYHTLFALRRGGG------VSLTDAALDLRRREVDCLVESEPDLVSRLRRLLMLTL 140
Query: 154 DCQIPIEKIELIQSELGLPKNFKSNLIPRYPELFSVREVKGLDHLCLE--SWDSSLAVTA 211
+P+ ++L++ +LGLP++++++++ RYP+ F++ + +G + + L WD LAV+
Sbjct: 141 PRSLPLHTVDLLRWDLGLPRDYRASILRRYPDHFALDQPEGDERVWLRLLWWDDGLAVSE 200
Query: 212 REEKLNFDGFHMDCRGIPKDGNVFGPFAFKLKYPAGFRPNRKYLEEVVRWQKLAFPSPYL 271
EK G D +P F + + GF K + + WQ L + SPY
Sbjct: 201 L-EKSTAGGGGGDTTCLP----------FPVSFTKGFGLRSKCINWLKEWQALPYTSPYA 249
Query: 272 NARRVEPATPQARKRAVAVMHEILSLTMERR 302
+ ++ T + KR V V HE+L LT+ +R
Sbjct: 250 DPSGLDRRTDVSEKRNVGVFHELLHLTVAKR 280
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,928,355
Number of extensions: 387604
Number of successful extensions: 1006
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 997
Number of HSP's successfully gapped: 10
Length of query: 306
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 205
Effective length of database: 11,762,187
Effective search space: 2411248335
Effective search space used: 2411248335
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)