Os03g0668400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF860, plant family protein.
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Os03g0668400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF860, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.38 | 0.513 | 6.46 | 0.0433 | 1.47 | -2.29 | 1.21 | -1.76 | 0.61 | 2.81 | 24.31 | 352 | -- | -- |
| 122.68 | 0.516 | 6.49 | -0.221 | 1.4 | -2.05 | 1 | -- | 0.529 | 3.02 | 24.87 | 437 | -- | -- |
| 123.87 | 0.518 | 6.46 | 0.00946 | 1.44 | -2.25 | -- | -1.51 | 0.601 | 2.82 | 24.2 | 386 | -- | -- |
| 125.75 | 0.522 | 6.49 | -0.25 | 1.44 | -2.08 | -- | -- | 0.537 | 2.88 | 24.6 | 397 | -- | -- |
| 197.08 | 0.654 | 6.49 | -0.12 | -- | -2.45 | -- | -1.37 | 0.49 | -- | 26.48 | 1025 | -- | -- |
| 184.01 | 0.636 | 6.41 | 0.303 | 1.29 | -- | 0.916 | -- | 0.939 | 2.44 | -- | -- | -- | -- |
| 187.04 | 0.64 | 6.41 | 0.279 | 1.3 | -- | -- | -- | 0.934 | 2.41 | -- | -- | -- | -- |
| 198.89 | 0.657 | 6.52 | -0.378 | -- | -2.34 | -- | -- | 0.432 | -- | 26.86 | 1022 | -- | -- |
| 127.22 | 0.525 | 6.48 | -- | 1.43 | -1.97 | -- | -- | 0.579 | 2.87 | 24.6 | 395 | -- | -- |
| 286.28 | 0.791 | 6.4 | 0.333 | -- | -- | -- | -- | 0.966 | -- | -- | -- | -- | -- |
| 189.09 | 0.643 | 6.42 | -- | 1.3 | -- | -- | -- | 0.903 | 2.41 | -- | -- | -- | -- |
| 201.99 | 0.662 | 6.5 | -- | -- | -2.2 | -- | -- | 0.504 | -- | 26.82 | 1024 | -- | -- |
| 289.21 | 0.794 | 6.41 | -- | -- | -- | -- | -- | 0.929 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.62 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 18 |
| 9 | 117.52 | temperature | 25 | 720 | < th | dose dependent | sin | 15 | NA |
| 12 | 118.05 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 11 |
| 17 | 118.21 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 13 |
| 81 | 121.75 | temperature | 25 | 270 | < th | dose dependent | rect. | 16 | 22 |
| 122 | 122.76 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 125 | 122.83 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 128 | 122.90 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 292 | 125.68 | temperature | 10 | 720 | > th | dose dependent | sin | 13 | NA |
| 310 | 125.93 | temperature | 25 | 270 | < th | dose dependent | sin | 10 | NA |
| 354 | 126.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 16 |
| 495 | 127.78 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 506 | 127.85 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 22 |
| 512 | 127.91 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 7 |
| 528 | 127.97 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 532 | 127.98 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 541 | 128.03 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 564 | 128.13 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 570 | 128.14 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 575 | 128.15 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 627 | 128.35 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 638 | 128.39 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 654 | 128.51 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 17 |
| 670 | 128.61 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 679 | 128.68 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 20 |
| 733 | 129.00 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 863 | 129.73 | temperature | 25 | 1440 | < th | dose independent | sin | 17 | NA |
| 885 | 129.84 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 15 |