BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0667300 Os03g0667300|AB126086
(370 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0667300 Similar to Metal transport protein 574 e-164
Os03g0667500 Similar to Metal transport protein 411 e-115
Os07g0232800 Similar to Zinc transporter protein ZIP1 266 2e-71
Os05g0472700 Similar to Metal transport protein 228 4e-60
Os04g0613000 Similar to Zinc transporter ZIP1 (Fragment) 223 1e-58
Os05g0198400 Similar to Zinc transporter 4, chloroplast pre... 186 2e-47
Os08g0207500 Similar to Zinc transporter ZIP1 (Fragment) 165 5e-41
Os05g0164800 Similar to Zinc transporter 6, chloroplast pre... 155 6e-38
Os06g0566300 Similar to Zinc transporter 4, chloroplast pre... 78 1e-14
>Os03g0667300 Similar to Metal transport protein
Length = 370
Score = 574 bits (1479), Expect = e-164, Method: Compositional matrix adjust.
Identities = 299/370 (80%), Positives = 299/370 (80%)
Query: 1 MMMSSSQTPVRIAFVFLVILAATDAHSDHRTXXXXXXXXXXXXECHSVXXXXXXXXXXXX 60
MMMSSSQTPVRIAFVFLVILAATDAHSDHRT ECHSV
Sbjct: 1 MMMSSSQTPVRIAFVFLVILAATDAHSDHRTPPPACGGAAVGGECHSVARALRLKLIAIP 60
Query: 61 XXXXXSVAGVCLPLFARSVPALRPDGGLFAVVKAFASGVILGTGYMHVLPDSFNDLTSPC 120
SVAGVCLPLFARSVPALRPDGGLFAVVKAFASGVILGTGYMHVLPDSFNDLTSPC
Sbjct: 61 AILAASVAGVCLPLFARSVPALRPDGGLFAVVKAFASGVILGTGYMHVLPDSFNDLTSPC 120
Query: 121 LPRKPWSEXXXXXXXXXXXXXXTLMVDSLMLTFHTRGSKGRASSAVXXXXXXXXXXXXXX 180
LPRKPWSE TLMVDSLMLTFHTRGSKGRASSAV
Sbjct: 121 LPRKPWSEFPFAAFVAMLAAVFTLMVDSLMLTFHTRGSKGRASSAVAHHGDHGHCHAHAL 180
Query: 181 XQADVAALSTTEAADQGSGDVEAGNTTKAQLLRNRVIVQVLEMGIVVHSVVIGLGMGASQ 240
QADVAALSTTEAADQGSGDVEAGNTTKAQLLRNRVIVQVLEMGIVVHSVVIGLGMGASQ
Sbjct: 181 GQADVAALSTTEAADQGSGDVEAGNTTKAQLLRNRVIVQVLEMGIVVHSVVIGLGMGASQ 240
Query: 241 NVCTIRPLVAALCFHQMFEGMGLGGCILQAGYGGRTRSALVFFFSTTTPFGIALGLALTR 300
NVCTIRPLVAALCFHQMFEGMGLGGCILQAGYGGRTRSALVFFFSTTTPFGIALGLALTR
Sbjct: 241 NVCTIRPLVAALCFHQMFEGMGLGGCILQAGYGGRTRSALVFFFSTTTPFGIALGLALTR 300
Query: 301 VYSDSSPTALVVVGLLNAASAGLLHYMALVELLAADFMGPKLQGNVRLQXXXXXXXXXXX 360
VYSDSSPTALVVVGLLNAASAGLLHYMALVELLAADFMGPKLQGNVRLQ
Sbjct: 301 VYSDSSPTALVVVGLLNAASAGLLHYMALVELLAADFMGPKLQGNVRLQLAASLAILLGA 360
Query: 361 XXMSVMAKWA 370
MSVMAKWA
Sbjct: 361 GGMSVMAKWA 370
>Os03g0667500 Similar to Metal transport protein
Length = 374
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/344 (65%), Positives = 238/344 (69%), Gaps = 39/344 (11%)
Query: 45 CHSVXXXXXXXXXXXXXXXXXSVAGVCLPLFARSVPALRPDGGLFAVVKAFASGVILGTG 104
CH V SV GVCLPL +RSVPALRPDGGLFAVVKAFASGVIL TG
Sbjct: 52 CHDVPRALRLKLIAIPTILVSSVVGVCLPLLSRSVPALRPDGGLFAVVKAFASGVILATG 111
Query: 105 YMHVLPDSFNDLTSPCLPRKPWSEXXXXXXXXXXXXXXTLMVDSLMLTFHTRGSKGRASS 164
YMHVLPD+FN+LTSPCLPRKPWSE TLM DSLMLT++ R SK R SS
Sbjct: 112 YMHVLPDAFNNLTSPCLPRKPWSEFPFAAFVAMLAAVSTLMADSLMLTYYNR-SKPRPSS 170
Query: 165 AVXXXXXXXXXXXXXXXQADVAALSTT-EAADQ-----------------GSGDVEAGNT 206
DVAA++ E+ DQ DVEA
Sbjct: 171 G-----------------GDVAAVADHGESPDQGHRHGHGHGHGHGMAVAKPDDVEA--- 210
Query: 207 TKAQLLRNRVIVQVLEMGIVVHSVVIGLGMGASQNVCTIRPLVAALCFHQMFEGMGLGGC 266
T+ QL RNRV+VQVLE+GIVVHSVVIGLGMGASQNVCTIRPLVAA+CFHQMFEGMGLGGC
Sbjct: 211 TQVQLRRNRVVVQVLEIGIVVHSVVIGLGMGASQNVCTIRPLVAAMCFHQMFEGMGLGGC 270
Query: 267 ILQAGYGGRTRSALVFFFSTTTPFGIALGLALTRVYSDSSPTALVVVGLLNAASAGLLHY 326
ILQA YG R RS LVFFFSTTTPFGIALGLALTRVY D+SPTAL+VVGLLNAASAGLLHY
Sbjct: 271 ILQAEYGRRMRSVLVFFFSTTTPFGIALGLALTRVYRDNSPTALIVVGLLNAASAGLLHY 330
Query: 327 MALVELLAADFMGPKLQGNVRLQXXXXXXXXXXXXXMSVMAKWA 370
MALVELLAADFMGPKLQGNVRLQ MSVMAKWA
Sbjct: 331 MALVELLAADFMGPKLQGNVRLQLAAFLAVLLGAGGMSVMAKWA 374
>Os07g0232800 Similar to Zinc transporter protein ZIP1
Length = 357
Score = 266 bits (679), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/305 (49%), Positives = 192/305 (62%), Gaps = 14/305 (4%)
Query: 69 GVCLPLFARSVPALRPDGGLFAVVKAFASGVILGTGYMHVLPDSFNDLTSPCLPRK-PWS 127
G LP R VPALRPDG +F +VKAFA+GVIL TG++H+LPD+F++LT CLP PW
Sbjct: 64 GCGLPSLGRHVPALRPDGDVFFLVKAFAAGVILATGFIHILPDAFDNLTDDCLPAGGPWK 123
Query: 128 EXXXXXXXXXXXXXXTLMVDSLMLTFHTRG-SKGRASSAVXXXXXXXXXXXXXXXQADVA 186
E TL+VD+L + TR SK A++A Q V
Sbjct: 124 EFPFAGFGAMVGAIGTLVVDTLATGYFTRALSKKDAATA-----------AAHEGQVHVH 172
Query: 187 ALSTTEAADQGSGDVEA-GNTTKAQLLRNRVIVQVLEMGIVVHSVVIGLGMGASQNVCTI 245
+T A S V A G K LR+RVI QVLE+GIVVHSV+IG+ +GASQN TI
Sbjct: 173 THATHGHAHGSSALVAAVGEDDKETTLRHRVISQVLELGIVVHSVIIGISLGASQNPETI 232
Query: 246 RPLVAALCFHQMFEGMGLGGCILQAGYGGRTRSALVFFFSTTTPFGIALGLALTRVYSDS 305
+PLV AL FHQMFEGMGLGGCI+QA + R+ +V FF TTP GIA+G+ ++ VY++S
Sbjct: 233 KPLVVALSFHQMFEGMGLGGCIVQAKFKVRSIVTMVLFFCLTTPVGIAVGVGISSVYNES 292
Query: 306 SPTALVVVGLLNAASAGLLHYMALVELLAADFMGPKLQGNVRLQXXXXXXXXXXXXXMSV 365
SPTALVV G+LN+ +AG+L YMALV+LLA DFM P++Q +LQ MS+
Sbjct: 293 SPTALVVEGILNSVAAGILIYMALVDLLAEDFMNPRVQSKGKLQLGINLAMLAGAGLMSM 352
Query: 366 MAKWA 370
+AKWA
Sbjct: 353 LAKWA 357
>Os05g0472700 Similar to Metal transport protein
Length = 353
Score = 228 bits (582), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 129/305 (42%), Positives = 170/305 (55%), Gaps = 10/305 (3%)
Query: 66 SVAGVCLPLFARSVPALRPDGGLFAVVKAFASGVILGTGYMHVLPDSFNDLTSPCLPRKP 125
S G LP PA++P+ +F VKAFA GVIL TG +H+LP +F L+SPCL P
Sbjct: 59 STVGAALPSLGGRFPAIQPETDVFLSVKAFAGGVILATGLVHILPAAFEALSSPCLVGGP 118
Query: 126 WSEXXXXXXXXXXXXXXTLMVDSLMLTFHTRGSKGRASSAVXXXXXXXXXXXXXXXQADV 185
W TL+VD++ + R R ++AV
Sbjct: 119 WKRFPFAGMVAMVSAIGTLIVDTVATGYFHRTDAKRKAAAVADEPADDLEASDEHSHGHA 178
Query: 186 AALSTTEAADQGSGDVEAGNTTKAQLLRNRVIVQVLEMGIVVHSVVIGLGMGASQNVCTI 245
+S A G D L+R+RVI QVLE+G+VVHS++IG+ +GAS T+
Sbjct: 179 HGMSVMSVAPAGEED----------LVRHRVISQVLELGVVVHSLIIGMSLGASDFPSTV 228
Query: 246 RPLVAALCFHQMFEGMGLGGCILQAGYGGRTRSALVFFFSTTTPFGIALGLALTRVYSDS 305
RPLV AL FHQ FEG+GLGGCI+QA + R+ + FFS TTP GI +G+ ++ VY +
Sbjct: 229 RPLVPALTFHQFFEGIGLGGCIVQAKFRVRSVVTMALFFSLTTPAGIVVGIGISSVYDAN 288
Query: 306 SPTALVVVGLLNAASAGLLHYMALVELLAADFMGPKLQGNVRLQXXXXXXXXXXXXXMSV 365
SPTALVV GLL AA+AG+L YMALV++LA DFM K+Q RLQ MS+
Sbjct: 289 SPTALVVQGLLEAAAAGILVYMALVDILAEDFMKTKVQRRGRLQLAMNVALLLGAGLMSM 348
Query: 366 MAKWA 370
+A WA
Sbjct: 349 IAIWA 353
>Os04g0613000 Similar to Zinc transporter ZIP1 (Fragment)
Length = 364
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 176/311 (56%), Gaps = 11/311 (3%)
Query: 68 AGVCLPLFARSVPALRPDGGLFAVVKAFASGVILGTGYMHVLPDSFNDLTSPCLPR---- 123
AGV +P+ RS+ ALRPDG +F VKAFA+GVIL TG +H+LP +F+ LTSPCL R
Sbjct: 57 AGVLVPVIGRSMAALRPDGDIFFAVKAFAAGVILATGMVHILPAAFDALTSPCLKRGGGD 116
Query: 124 -KPWSEXXXXXXXXXXXXXXTLMVDSLMLTFHTRGSKGRASSAVXXXXXXXXXXXXXXXQ 182
P+ T++VDSL ++ R +A
Sbjct: 117 RNPFP---FAGLVSMSAAVSTMVVDSLAAGYYHRSQFRKARPVDNINVHKHAGDERAEHA 173
Query: 183 ADVAALSTTEAADQGSGDVEAGNTTK---AQLLRNRVIVQVLEMGIVVHSVVIGLGMGAS 239
+ A + V G+ + A+ +R++V+ QVLE+GI+VHSV+IG+ +GAS
Sbjct: 174 QHINAHTHGGHTHSHGDIVVCGSPEEGSVAESIRHKVVSQVLELGILVHSVIIGVSLGAS 233
Query: 240 QNVCTIRPLVAALCFHQMFEGMGLGGCILQAGYGGRTRSALVFFFSTTTPFGIALGLALT 299
TIRPLV AL FHQ FEG+GLGGCI+QA + R + FFS T P GI LG+A++
Sbjct: 234 VRPSTIRPLVGALSFHQFFEGVGLGGCIVQANFKVRATVIMAIFFSLTAPVGIVLGIAIS 293
Query: 300 RVYSDSSPTALVVVGLLNAASAGLLHYMALVELLAADFMGPKLQGNVRLQXXXXXXXXXX 359
Y+ S TA VV G+ N+ASAG+L YM+LV+LLA DF PKLQ N +LQ
Sbjct: 294 SSYNVHSSTAFVVEGVFNSASAGILIYMSLVDLLATDFNNPKLQINTKLQLMAYLALFLG 353
Query: 360 XXXMSVMAKWA 370
MS++A WA
Sbjct: 354 AGLMSMLAIWA 364
>Os05g0198400 Similar to Zinc transporter 4, chloroplast precursor (ZRT/IRT-like
protein 4)
Length = 384
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/333 (39%), Positives = 172/333 (51%), Gaps = 35/333 (10%)
Query: 67 VAGVCLPLFARSVPALRPDGGLFAVVKAFASGVILGTGYMHVLPDSFNDLTSPCLPRKPW 126
V GV LPL R ALR D F KAFA+GVIL TG++H+L D+ + L+SPCLP PW
Sbjct: 58 VVGVGLPLAGRKRRALRTDSAAFVAAKAFAAGVILATGFVHMLHDAEHALSSPCLPAHPW 117
Query: 127 SEXXXXXXXXXXXXXXTLMVDSLMLTFHTRGSKGRASSAVXXXXXXXXXXXXXXXQADVA 186
TL++D L F+ K RA + D+
Sbjct: 118 RSFPFPGFVAMSAALATLVLDFLATRFYE--GKHRAETERVKAAAAAALAASSASDDDIT 175
Query: 187 ALSTTE-----------------------------AADQGSGDVEAGNTTKAQLLRNRVI 217
++ TE A +GSG G +R+ V+
Sbjct: 176 VVTVTEDDNDNKAPLLQPHSHSHSHPHGHGHGHELAQPEGSG----GEGEVPAQVRSVVV 231
Query: 218 VQVLEMGIVVHSVVIGLGMGASQNVCTIRPLVAALCFHQMFEGMGLGGCILQAGYGGRTR 277
Q+LEMGIV HSV+IGL +G S++ CTIRPLVAAL FHQ FEG LGGCI QA + +
Sbjct: 232 SQILEMGIVSHSVIIGLSLGVSRSPCTIRPLVAALSFHQFFEGFALGGCIAQAQFKTLSA 291
Query: 278 SALVFFFSTTTPFGIALGLALTRVYSDSSPTALVVVGLLNAASAGLLHYMALVELLAADF 337
+ + FF+ TTP GIA G + Y+ +SP ALVV G+L++ SAG+L YM+LV+L+AADF
Sbjct: 292 AIMACFFAITTPAGIAAGAGVASFYNANSPRALVVEGILDSVSAGILIYMSLVDLIAADF 351
Query: 338 MGPKLQGNVRLQXXXXXXXXXXXXXMSVMAKWA 370
+G K+ G+ R Q MS +A WA
Sbjct: 352 LGGKMTGSTRQQVMAYIALFLGALSMSSLAIWA 384
>Os08g0207500 Similar to Zinc transporter ZIP1 (Fragment)
Length = 396
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 116/166 (69%)
Query: 205 NTTKAQLLRNRVIVQVLEMGIVVHSVVIGLGMGASQNVCTIRPLVAALCFHQMFEGMGLG 264
+ + A+ +R+RV+ QVLE+GI+VHSV+IG+ +GAS +IRPLV AL FHQ FEG+GLG
Sbjct: 231 DASVAETIRHRVVSQVLELGILVHSVIIGVSLGASLRPSSIRPLVGALSFHQFFEGIGLG 290
Query: 265 GCILQAGYGGRTRSALVFFFSTTTPFGIALGLALTRVYSDSSPTALVVVGLLNAASAGLL 324
GCI+QA + + + FFS T P GIALG+A++ YS S TALVV G+ N+A+AG+L
Sbjct: 291 GCIVQANFKAKATVIMATFFSLTAPVGIALGIAISSSYSKHSSTALVVEGVFNSAAAGIL 350
Query: 325 HYMALVELLAADFMGPKLQGNVRLQXXXXXXXXXXXXXMSVMAKWA 370
YM+LV+LLAADF PKLQ N +LQ MS++A WA
Sbjct: 351 IYMSLVDLLAADFNNPKLQTNTKLQLAVYLALFLGAGMMSLLAIWA 396
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%)
Query: 68 AGVCLPLFARSVPALRPDGGLFAVVKAFASGVILGTGYMHVLPDSFNDLTSPC 120
AGV +P+ RS ALRPDG +F VKAFA+GVIL TG +H+LP +F+ L SPC
Sbjct: 72 AGVLVPVLGRSFAALRPDGDVFFAVKAFAAGVILATGMVHILPAAFDALASPC 124
>Os05g0164800 Similar to Zinc transporter 6, chloroplast precursor (ZRT/IRT-like
protein 6)
Length = 395
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 109/161 (67%), Gaps = 3/161 (1%)
Query: 213 RNRVIVQVLEMGIVVHSVVIGLGMGASQNVCTIRPLVAALCFHQMFEGMGLGGCILQAGY 272
+ +++ +VLE+GIV HSV+IG+ MG SQ+VC IRPLV AL FHQ+FEGMGLGGCI QAG+
Sbjct: 235 KQKMVSKVLEIGIVFHSVIIGVTMGMSQDVCAIRPLVVALSFHQVFEGMGLGGCIAQAGF 294
Query: 273 GGRTRSALVFFFSTTTPFGIALGLALTRV--YSDSSPTALVVVGLLNAASAGLLHYMALV 330
G T + FS TTP GI LG+A+ + Y DSSP AL++ GLL + S+G+L YMALV
Sbjct: 295 GIATVGYMCVMFSVTTPLGILLGMAIFHMTGYDDSSPNALIIEGLLGSLSSGILVYMALV 354
Query: 331 ELLAADFMGPKLQGNV-RLQXXXXXXXXXXXXXMSVMAKWA 370
+L++ DF K+ + +L+ MS++A WA
Sbjct: 355 DLISLDFFHNKMMSSSNKLKKVSYVALVLGSASMSILALWA 395
>Os06g0566300 Similar to Zinc transporter 4, chloroplast precursor (ZRT/IRT-like
protein 4)
Length = 69
Score = 77.8 bits (190), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/52 (67%), Positives = 43/52 (82%)
Query: 216 VIVQVLEMGIVVHSVVIGLGMGASQNVCTIRPLVAALCFHQMFEGMGLGGCI 267
+I ++LE+GIV HSV+IGL +G SQ+ CTI+PLVAAL FHQ FEG LGGCI
Sbjct: 5 IIYKILELGIVSHSVIIGLSLGVSQSPCTIKPLVAALSFHQFFEGFALGGCI 56
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.135 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,315,201
Number of extensions: 334432
Number of successful extensions: 924
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 916
Number of HSP's successfully gapped: 12
Length of query: 370
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 268
Effective length of database: 11,709,973
Effective search space: 3138272764
Effective search space used: 3138272764
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)