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Os05g0164800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Zinc transporter 6, chloroplast precursor (ZRT/IRT-like protein 6).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.016) R2 : 0.394
β1 : 0.83 (0.0585) R2dD : 0.278 R2D : 0.126
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.418 (0.0341) R2dN8 : 0.268 R2N8 : 0.116
σ : 0.3
deviance : 41.16
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.67 0.224 11.8 0.893 0.471 1.15 1.34 1.23 0.437 20.6 1.559 811 -- --
23.83 0.227 11.8 0.918 0.466 1.18 0.916 -- 0.486 20.5 2.529 805 -- --
24.44 0.232 11.8 0.807 0.512 0.0271 -- 0.577 0.403 4.65 2.453 721 -- --
24.73 0.232 11.7 0.829 0.541 0.219 -- -- 0.457 4.32 44.17 1419 -- --
26.88 0.241 11.8 0.785 -- 0.735 -- -0.0375 0.436 -- 4.184 2006 -- --
26.24 0.24 11.8 0.813 0.515 -- 0.388 -- 0.407 4.19 -- -- -- --
26.59 0.241 11.8 0.81 0.521 -- -- -- 0.405 4.44 -- -- -- --
26.41 0.239 11.7 0.874 -- 0.766 -- -- 0.485 -- 4.131 2001 -- --
41.02 0.298 11.8 -- 0.531 0.339 -- -- 0.422 4.45 93.38 8845 -- --
41.16 0.3 11.8 0.83 -- -- -- -- 0.418 -- -- -- -- --
43.87 0.31 11.8 -- 0.537 -- -- -- 0.315 4.4 -- -- -- --
44.69 0.311 11.8 -- -- 0.842 -- -- 0.454 -- 10 2006 -- --
59.33 0.36 11.8 -- -- -- -- -- 0.326 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.11 humidity 70.0 720 > th dose independent rect. 18 3
2 21.20 humidity 70.0 720 > th dose independent rect. 17 5
3 21.23 humidity 60.0 720 > th dose dependent rect. 20 1
5 21.25 humidity 70.0 720 > th dose independent rect. 17 14
17 21.55 humidity 70.0 720 > th dose independent rect. 18 10
23 21.67 humidity 50.0 720 > th dose dependent rect. 18 4
42 21.82 humidity 70.0 720 > th dose independent sin 12 NA
67 22.07 temperature 10.0 30 > th dose dependent rect. 8 12
85 22.17 temperature 30.0 720 < th dose independent rect. 17 15
105 22.32 temperature 30.0 720 < th dose independent rect. 17 5
108 22.34 temperature 15.0 90 > th dose dependent rect. 3 16
148 22.46 humidity 50.0 720 > th dose dependent sin 14 NA
166 22.51 humidity 50.0 720 > th dose dependent rect. 16 15
174 22.54 precipitation 0.1 720 < th dose independent rect. 3 16
176 22.54 precipitation 0.1 720 < th dose dependent rect. 3 16
188 22.58 temperature 10.0 720 > th dose dependent rect. 8 1
202 22.61 temperature 30.0 720 < th dose independent rect. 17 10
204 22.61 radiation 1.0 720 < th dose dependent rect. 5 17
205 22.62 temperature 30.0 720 < th dose independent sin 12 NA
238 22.69 temperature 10.0 270 > th dose dependent sin 3 NA
254 22.72 precipitation 0.1 720 < th dose independent rect. 17 17
255 22.72 precipitation 0.1 720 < th dose independent rect. 21 22
262 22.72 precipitation 0.1 720 < th dose dependent rect. 17 17
264 22.72 precipitation 0.1 720 < th dose dependent rect. 21 22
275 22.73 radiation 40.0 90 < th dose dependent rect. 5 23
277 22.74 radiation 1.0 720 > th dose independent rect. 17 17
279 22.74 radiation 40.0 10 < th dose dependent rect. 20 16
288 22.75 radiation 30.0 270 < th dose dependent rect. 18 18
297 22.76 radiation 10.0 720 < th dose dependent rect. 16 16
311 22.77 radiation 30.0 270 < th dose dependent rect. 17 20
352 22.81 radiation 1.0 720 < th dose dependent rect. 5 22
358 22.82 radiation 1.0 720 < th dose dependent rect. 20 23
362 22.83 radiation 1.0 720 > th dose independent rect. 17 22
365 22.83 temperature 10.0 270 > th dose dependent rect. 1 15
368 22.84 radiation 1.0 720 < th dose independent rect. 5 17
369 22.84 temperature 30.0 720 < th dose dependent rect. 19 2
375 22.84 radiation 10.0 270 < th dose dependent rect. 3 22
383 22.85 atmosphere 1015.0 30 < th dose dependent rect. 8 12
388 22.86 atmosphere 995.0 720 > th dose independent rect. 10 7
405 22.87 atmosphere 1000.0 90 > th dose independent rect. 5 9
426 22.88 temperature 30.0 720 < th dose dependent rect. 19 12
446 22.89 temperature 30.0 720 > th dose dependent rect. 18 15
461 22.90 temperature 30.0 720 < th dose dependent rect. 17 5
466 22.90 radiation 40.0 720 < th dose dependent rect. 16 16
472 22.91 wind 5.0 720 < th dose independent rect. 8 1
494 22.92 radiation 1.0 270 < th dose independent rect. 3 22
543 22.95 precipitation 0.1 720 < th dose independent rect. 21 8
544 22.95 wind 9.0 720 < th dose independent rect. 17 16
546 22.95 radiation 1.0 720 < th dose independent rect. 5 22
548 22.95 precipitation 0.1 720 < th dose dependent rect. 21 8
553 22.95 temperature 10.0 720 > th dose dependent rect. 6 14
603 22.98 humidity 90.0 720 < th dose dependent rect. 17 6
613 22.98 radiation 40.0 10 < th dose dependent rect. 6 22
623 22.99 radiation 1.0 720 < th dose dependent rect. 21 8
637 23.00 atmosphere 995.0 720 > th dose independent rect. 5 17
638 23.00 temperature 30.0 720 < th dose dependent sin 11 NA
660 23.00 radiation 10.0 90 < th dose dependent rect. 5 22
664 23.01 temperature 20.0 10 > th dose independent rect. 8 12
665 23.01 radiation 10.0 270 < th dose independent rect. 18 18
683 23.02 temperature 25.0 720 > th dose dependent rect. 22 1
689 23.02 temperature 10.0 720 > th dose dependent rect. 22 13
707 23.03 wind 1.0 30 > th dose independent rect. 20 12
711 23.03 radiation 1.0 720 < th dose independent rect. 20 23
742 23.04 radiation 1.0 720 < th dose dependent sin 22 NA
759 23.05 wind 9.0 720 < th dose independent rect. 21 8
760 23.05 atmosphere 1000.0 270 > th dose independent rect. 3 10
761 23.05 radiation 1.0 720 > th dose independent rect. 7 12
782 23.05 temperature 10.0 720 > th dose dependent rect. 7 17
790 23.06 radiation 1.0 720 < th dose independent rect. 17 22
804 23.07 temperature 10.0 720 > th dose independent rect. 9 8
806 23.07 temperature 10.0 720 > th dose independent rect. 21 8
807 23.07 temperature 30.0 720 < th dose independent rect. 21 8
808 23.07 humidity 50.0 720 > th dose independent rect. 21 8
811 23.07 atmosphere 995.0 720 > th dose independent rect. 21 8
812 23.07 atmosphere 1015.0 720 < th dose independent rect. 9 8
813 23.07 radiation 1.0 720 < th dose independent rect. 21 8
820 23.07 precipitation 0.1 30 < th dose independent rect. 8 12
821 23.07 temperature 10.0 720 > th dose independent rect. 5 16
822 23.07 temperature 10.0 720 > th dose independent rect. 17 16
836 23.07 precipitation 0.1 30 < th dose dependent rect. 8 12
844 23.07 temperature 10.0 720 > th dose dependent rect. 4 16
855 23.08 temperature 10.0 1440 > th dose independent rect. 6 9
861 23.08 precipitation 0.1 720 < th dose independent rect. 6 14
862 23.08 temperature 10.0 1440 > th dose independent rect. 15 15
870 23.08 precipitation 0.1 720 < th dose dependent rect. 6 14
897 23.09 temperature 25.0 720 < th dose independent rect. 18 18
904 23.09 radiation 10.0 720 < th dose dependent sin 12 NA
905 23.09 temperature 10.0 720 > th dose dependent rect. 7 3
908 23.09 radiation 10.0 720 < th dose dependent rect. 16 7
928 23.09 temperature 10.0 30 > th dose dependent rect. 21 23
929 23.09 temperature 30.0 30 < th dose dependent rect. 5 23
934 23.09 radiation 1.0 720 < th dose dependent rect. 17 23
940 23.10 radiation 40.0 720 < th dose independent rect. 17 16
948 23.10 radiation 1.0 720 < th dose dependent no NA NA
952 23.10 radiation 1.0 720 < th dose dependent rect. 14 8
976 23.11 wind 9.0 720 < th dose independent rect. 21 23