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Os08g0207500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Zinc transporter ZIP1 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9 (0.0341) R2 : 0.517
β1 : -2.15 (0.125) R2dD : 0.325 R2D : 0.33
β2 : 1.08 (0.0817) R2dC : 0.186 R2C : 0.197
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0576 (0.0729) R2dN8 : 0.000885 R2N8 : -0.00473
σ : 0.642
deviance : 187.92
__
_____
C
peak time of C : 13.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
171.45 0.615 9.04 -2.22 0.26 -1.05 -0.187 0.276 -0.139 21.1 0.3999 93 -- --
171.72 0.61 9.04 -2.21 0.231 -1.02 0.00675 -- -0.138 20.9 0.4199 92 -- --
171.51 0.61 9.04 -2.21 0.256 -1.05 -- 0.183 -0.136 21.2 0.4 92 -- --
171.43 0.61 9.04 -2.21 0.282 -1.07 -- -- -0.143 21.4 0.3909 88 -- --
174.04 0.614 9.05 -2.22 -- -0.944 -- 0.127 -0.162 -- 0.39 92 -- --
187.84 0.643 9 -2.15 1.08 -- -0.145 -- -0.0568 13.2 -- -- -- --
187.92 0.642 9 -2.15 1.08 -- -- -- -0.0576 13.2 -- -- -- --
173.96 0.614 9.03 -2.21 -- -0.923 -- -- -0.133 -- 0.4 92 -- --
299.83 0.806 9.03 -- 0.242 -1.03 -- -- 0.0591 21.2 0.9741 86 -- --
260.24 0.754 9.02 -2.19 -- -- -- -- -0.0797 -- -- -- -- --
309.82 0.823 8.95 -- 1.12 -- -- -- 0.182 13.3 -- -- -- --
301.83 0.809 9 -- -- -0.907 -- -- 0.0721 -- 0.98 86 -- --
387.04 0.918 8.96 -- -- -- -- -- 0.164 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 160.24 radiation 1.0 720 > th dose independent rect. 11 6
2 162.29 temperature 10.0 270 > th dose dependent rect. 24 11
7 165.19 radiation 20.0 270 < th dose dependent rect. 20 13
10 165.71 radiation 1.0 30 > th dose independent rect. 11 23
11 165.78 temperature 10.0 270 > th dose dependent rect. 11 13
14 166.65 temperature 15.0 90 > th dose dependent rect. 13 12
21 167.15 radiation 1.0 90 > th dose independent rect. 11 21
26 167.28 radiation 1.0 90 > th dose independent rect. 9 23
30 167.46 temperature 25.0 270 > th dose independent rect. 7 2
31 167.60 radiation 1.0 90 < th dose independent rect. 15 14
35 167.83 temperature 25.0 10 > th dose independent rect. 8 5
37 167.84 radiation 10.0 270 > th dose independent rect. 7 3
38 167.84 radiation 10.0 270 > th dose independent rect. 6 5
51 167.87 temperature 10.0 720 > th dose dependent rect. 11 5
54 167.90 temperature 25.0 270 > th dose independent rect. 1 9
61 168.12 temperature 25.0 90 < th dose independent rect. 17 4
67 168.18 temperature 25.0 90 < th dose independent rect. 15 6
68 168.18 temperature 20.0 30 > th dose dependent rect. 8 5
79 168.24 radiation 10.0 90 < th dose dependent rect. 15 14
85 168.30 radiation 1.0 30 > th dose independent rect. 13 19
88 168.33 temperature 20.0 30 > th dose dependent rect. 13 19
103 168.54 wind 7.0 720 < th dose independent rect. 8 3
106 168.56 temperature 15.0 720 > th dose independent rect. 8 3
110 168.61 temperature 25.0 720 > th dose independent rect. 12 4
131 168.83 temperature 25.0 90 > th dose independent rect. 13 10
144 168.98 temperature 20.0 270 > th dose dependent rect. 8 1
145 168.99 precipitation 0.1 720 < th dose independent rect. 8 3
146 168.99 precipitation 0.1 720 < th dose dependent rect. 8 3
149 169.03 temperature 25.0 10 < th dose independent rect. 16 5
152 169.05 radiation 20.0 270 < th dose independent rect. 15 12
159 169.10 temperature 25.0 720 > th dose independent rect. 13 2
172 169.21 atmosphere 995.0 720 > th dose independent rect. 8 3
173 169.21 atmosphere 1015.0 720 < th dose independent rect. 8 3
174 169.21 temperature 10.0 720 > th dose independent rect. 11 21
181 169.27 temperature 25.0 90 > th dose independent rect. 13 18
189 169.32 temperature 25.0 90 > th dose independent rect. 13 13
190 169.32 radiation 40.0 270 < th dose dependent rect. 15 12
209 169.48 temperature 10.0 720 > th dose independent rect. 20 3
210 169.48 temperature 30.0 720 < th dose independent rect. 20 3
211 169.48 humidity 50.0 720 > th dose independent rect. 20 3
214 169.48 atmosphere 995.0 720 > th dose independent rect. 20 3
215 169.48 radiation 1.0 720 < th dose independent rect. 20 3
220 169.48 temperature 10.0 720 > th dose independent rect. 23 21
221 169.48 radiation 1.0 720 < th dose dependent rect. 20 3
228 169.51 wind 9.0 720 < th dose independent rect. 20 3
236 169.54 humidity 50.0 720 > th dose independent rect. 8 3
239 169.55 precipitation 0.1 720 < th dose independent rect. 20 3
240 169.55 precipitation 0.1 720 < th dose dependent rect. 20 3
242 169.58 radiation 10.0 270 > th dose independent sin 9 NA
281 169.83 humidity 50.0 720 > th dose dependent rect. 20 1
297 169.93 radiation 1.0 720 < th dose dependent rect. 23 6
313 170.04 wind 9.0 720 < th dose dependent rect. 20 3
325 170.11 radiation 10.0 270 < th dose independent rect. 20 13
344 170.21 wind 9.0 720 < th dose dependent rect. 20 1
372 170.37 precipitation 0.1 720 < th dose independent rect. 11 6
374 170.37 precipitation 0.1 720 < th dose dependent rect. 11 6
380 170.41 temperature 25.0 10 < th dose independent rect. 14 7
423 170.63 wind 9.0 30 < th dose independent rect. 8 14
425 170.65 radiation 1.0 1440 > th dose independent rect. 11 1
433 170.71 radiation 20.0 90 < th dose independent rect. 21 11
457 170.83 temperature 10.0 270 > th dose independent rect. 20 11
458 170.83 temperature 30.0 270 < th dose independent rect. 20 11
459 170.83 humidity 50.0 270 > th dose independent rect. 20 11
461 170.83 atmosphere 995.0 270 > th dose independent rect. 20 11
462 170.83 radiation 40.0 270 < th dose independent rect. 20 11
463 170.83 temperature 10.0 270 > th dose independent rect. 7 13
464 170.83 atmosphere 1015.0 270 < th dose independent rect. 7 13
471 170.86 wind 9.0 270 < th dose independent rect. 20 11
481 170.90 temperature 15.0 10 > th dose independent rect. 22 10
492 170.95 radiation 1.0 720 < th dose dependent rect. 14 6
532 171.08 wind 5.0 720 < th dose independent rect. 20 3
533 171.08 temperature 25.0 30 > th dose dependent sin 7 NA
542 171.12 temperature 25.0 10 > th dose independent rect. 13 12
546 171.13 temperature 25.0 30 > th dose dependent rect. 19 18
559 171.19 temperature 25.0 30 > th dose independent rect. 13 6
575 171.23 radiation 1.0 90 > th dose independent sin 14 NA
581 171.26 wind 9.0 720 < th dose independent rect. 11 21
590 171.29 wind 7.0 10 < th dose independent rect. 22 10
592 171.31 radiation 1.0 720 < th dose independent rect. 23 6
600 171.34 humidity 50.0 90 > th dose independent rect. 8 13
611 171.37 humidity 50.0 720 > th dose dependent rect. 20 3
619 171.40 precipitation 0.1 270 < th dose independent rect. 20 11
621 171.40 precipitation 0.1 270 < th dose dependent rect. 20 11
624 171.42 atmosphere 1000.0 30 > th dose independent rect. 22 10
626 171.43 temperature 30.0 90 < th dose dependent rect. 17 4
632 171.44 temperature 30.0 10 < th dose independent rect. 22 10
633 171.44 humidity 50.0 10 > th dose independent rect. 22 10
637 171.44 temperature 10.0 10 > th dose independent rect. 8 14
639 171.44 atmosphere 995.0 720 > th dose independent rect. 18 14
640 171.44 atmosphere 1015.0 10 < th dose independent rect. 8 14
643 171.45 temperature 10.0 720 > th dose independent rect. 11 6
644 171.45 atmosphere 1015.0 720 < th dose independent rect. 11 6
646 171.45 temperature 10.0 720 > th dose independent rect. 17 18
652 171.47 radiation 40.0 90 > th dose independent rect. 9 2
658 171.48 radiation 10.0 4320 < th dose independent rect. 17 18
662 171.49 precipitation 0.1 720 < th dose independent rect. 23 6
663 171.49 radiation 10.0 4320 < th dose independent rect. 23 12
668 171.49 precipitation 0.1 720 < th dose dependent rect. 23 6
672 171.50 radiation 10.0 4320 < th dose independent rect. 4 7
682 171.51 radiation 10.0 4320 < th dose independent rect. 7 4
683 171.51 wind 9.0 720 < th dose independent rect. 23 6
684 171.51 temperature 10.0 720 > th dose independent rect. 23 6
685 171.51 temperature 30.0 720 < th dose independent rect. 23 6
686 171.51 humidity 50.0 720 > th dose independent rect. 23 6
689 171.51 atmosphere 995.0 720 > th dose independent rect. 23 6
697 171.51 temperature 10.0 720 > th dose independent rect. 5 18
746 171.59 radiation 1.0 720 > th dose independent rect. 11 19
750 171.60 wind 1.0 720 > th dose independent rect. 8 3
771 171.67 radiation 40.0 720 < th dose dependent rect. 15 5
786 171.70 radiation 1.0 90 < th dose dependent rect. 23 23
789 171.72 radiation 10.0 4320 < th dose independent rect. 7 2
804 171.75 radiation 10.0 270 < th dose dependent rect. 15 3
810 171.79 humidity 90.0 720 < th dose independent rect. 8 3
833 171.87 radiation 10.0 4320 < th dose dependent rect. 7 4
837 171.88 radiation 1.0 90 < th dose dependent no NA NA
868 171.92 radiation 10.0 90 < th dose dependent sin 14 NA
871 171.94 temperature 10.0 1440 > th dose independent rect. 23 10
874 171.94 humidity 50.0 1440 > th dose independent rect. 23 10
876 171.94 atmosphere 995.0 1440 > th dose independent rect. 23 10
877 171.94 temperature 10.0 1440 > th dose independent rect. 9 14
939 172.07 atmosphere 1015.0 10 < th dose independent rect. 22 10
962 172.12 precipitation 0.1 270 < th dose independent rect. 11 12
965 172.12 precipitation 0.1 270 < th dose dependent rect. 11 12
966 172.13 wind 7.0 720 < th dose independent rect. 8 1
971 172.13 radiation 40.0 720 < th dose dependent rect. 4 4
977 172.15 radiation 1.0 30 < th dose independent rect. 23 23
982 172.16 wind 9.0 720 < th dose independent rect. 17 18
994 172.19 radiation 1.0 720 < th dose independent rect. 14 6
996 172.19 radiation 20.0 10 < th dose independent rect. 21 11
999 172.19 temperature 10.0 10 > th dose dependent rect. 22 10