BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0207500 Os08g0207500|AK105258
(396 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G12750.1 | chr3:4051950-4053156 REVERSE LENGTH=356 208 5e-54
AT2G32270.1 | chr2:13704278-13706612 FORWARD LENGTH=340 200 9e-52
AT1G05300.1 | chr1:1545258-1547709 REVERSE LENGTH=361 198 3e-51
AT1G60960.1 | chr1:22445410-22447060 REVERSE LENGTH=426 194 5e-50
AT1G10970.1 | chr1:3665201-3666933 REVERSE LENGTH=409 193 1e-49
AT2G04032.1 | chr2:1289944-1291251 FORWARD LENGTH=366 192 2e-49
AT5G62160.1 | chr5:24960107-24961263 FORWARD LENGTH=356 186 2e-47
AT4G33020.1 | chr4:15932603-15934267 REVERSE LENGTH=345 182 2e-46
AT4G19690.2 | chr4:10707487-10708723 FORWARD LENGTH=348 176 3e-44
AT1G31260.1 | chr1:11175559-11177362 REVERSE LENGTH=365 161 6e-40
AT2G30080.1 | chr2:12838730-12840112 REVERSE LENGTH=342 160 1e-39
AT4G19680.2 | chr4:10703385-10704621 FORWARD LENGTH=351 157 1e-38
AT5G45105.2 | chr5:18223453-18224946 REVERSE LENGTH=300 69 5e-12
>AT3G12750.1 | chr3:4051950-4053156 REVERSE LENGTH=356
Length = 355
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 105/163 (64%), Positives = 131/163 (80%), Gaps = 2/163 (1%)
Query: 236 ETIRHRVVSQVLELGILVHSVIIGVSLGASLRPSSIRPLVGALSFHQFFEGIGLGGCIVQ 295
E IR R+VSQVLE+GI+VHSVIIG+SLGAS +I+PL+ ALSFHQFFEG+GLGGCI
Sbjct: 193 ELIRRRIVSQVLEIGIVVHSVIIGISLGASQSIDTIKPLMAALSFHQFFEGLGLGGCISL 252
Query: 296 ANFKAKATVIMATFFSLTAPVGIALGIAIXXXXXXXXXT--ALVVEGVFNSAAAGILIYM 353
A+ K+K+TV+MATFFS+TAP+GI +G+ + + A++VEG+ N+A+AGILIYM
Sbjct: 253 ADMKSKSTVLMATFFSVTAPLGIGIGLGMSSGLGYRKESKEAIMVEGMLNAASAGILIYM 312
Query: 354 SLVDLLAADFNNPKLQTNTKLQLAVYLALFLGAGMMSLLAIWA 396
SLVDLLA DF NP+LQ+N L LA YL+L LGAG MSLLAIWA
Sbjct: 313 SLVDLLATDFMNPRLQSNLWLHLAAYLSLVLGAGSMSLLAIWA 355
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 85 ALRPDGDXXXXXXXXXXXXILATGMVHILPAAFDALASPCXXXXXXXXXFPFAGLVXXXX 144
AL+P+ D IL TG VHILP AF+ L+SPC FPFAG V
Sbjct: 77 ALQPENDIFFMVKAFAAGVILCTGFVHILPDAFERLSSPC-LEDTTAGKFPFAGFVAMLS 135
Query: 145 XXXXXXIDSVAAGYYRRSHFKK 166
ID+ A GYY+R HF
Sbjct: 136 AMGTLMIDTFATGYYKRQHFSN 157
>AT2G32270.1 | chr2:13704278-13706612 FORWARD LENGTH=340
Length = 339
Score = 200 bits (509), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 126/166 (75%)
Query: 231 DASVAETIRHRVVSQVLELGILVHSVIIGVSLGASLRPSSIRPLVGALSFHQFFEGIGLG 290
D+ + +R RV++QVLELGI+VHSV+IG+SLGAS P + + L AL FHQ FEG+GLG
Sbjct: 174 DSEKVQILRTRVIAQVLELGIIVHSVVIGISLGASQSPDAAKALFIALMFHQCFEGLGLG 233
Query: 291 GCIVQANFKAKATVIMATFFSLTAPVGIALGIAIXXXXXXXXXTALVVEGVFNSAAAGIL 350
GCI Q FK + IM+TFF++T P+GI +G+ I TAL+V+GV N+A+AGIL
Sbjct: 234 GCIAQGKFKCLSVTIMSTFFAITTPIGIVVGMGIANSYDESSPTALIVQGVLNAASAGIL 293
Query: 351 IYMSLVDLLAADFNNPKLQTNTKLQLAVYLALFLGAGMMSLLAIWA 396
IYMSLVDLLAADF +PK+Q+NT LQ+ ++AL LGAG+MSLLA WA
Sbjct: 294 IYMSLVDLLAADFTHPKMQSNTGLQIMAHIALLLGAGLMSLLAKWA 339
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 81 RSFAALRPDGDXXXXXXXXXXXXILATGMVHILPAAFDALASPCXXXXXXXXXFPFAGLV 140
+ F +LRP+ ILATG +H+LP A++ L SPC FPF G +
Sbjct: 76 KVFPSLRPETCFFFVTKAFAAGVILATGFMHVLPEAYEMLNSPC--LTSEAWEFPFTGFI 133
Query: 141 XXXXXXXXXXIDSVAAGYYRRSHFKKPRPVDD 172
+D+ A + +SH K + V D
Sbjct: 134 AMIAAILTLSVDTFATSSFYKSHCKASKRVSD 165
>AT1G05300.1 | chr1:1545258-1547709 REVERSE LENGTH=361
Length = 360
Score = 198 bits (504), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 123/158 (77%)
Query: 239 RHRVVSQVLELGILVHSVIIGVSLGASLRPSSIRPLVGALSFHQFFEGIGLGGCIVQANF 298
R RVV+QVLE+GI+VHSV+IG+SLGAS P + + L AL FHQ FEG+GLGGCI Q NF
Sbjct: 203 RTRVVAQVLEVGIIVHSVVIGISLGASQSPDTAKALFAALMFHQCFEGLGLGGCIAQGNF 262
Query: 299 KAKATVIMATFFSLTAPVGIALGIAIXXXXXXXXXTALVVEGVFNSAAAGILIYMSLVDL 358
+ IM+ FFS+T PVGIA+G+AI TAL+V+GV N+A+AGILIYMSLVD
Sbjct: 263 NCMSITIMSIFFSVTTPVGIAVGMAISSSYDDSSPTALIVQGVLNAASAGILIYMSLVDF 322
Query: 359 LAADFNNPKLQTNTKLQLAVYLALFLGAGMMSLLAIWA 396
LAADF +PK+Q+NT+LQ+ +++L +GAG+MSLLA WA
Sbjct: 323 LAADFMHPKMQSNTRLQIMAHISLLVGAGVMSLLAKWA 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Query: 81 RSFAALRPDGDXXXXXXXXXXXXILATGMVHILPAAFDALASPCXXXXXXXXXFPFAGLV 140
+ F +L+P+ ILATG +H+LP ++ L SPC FPF G +
Sbjct: 71 KFFPSLKPETTFFFVTKAFAAGVILATGFMHVLPEGYEKLTSPC--LKGEAWEFPFTGFI 128
Query: 141 XXXXXXXXXXIDSVAAGYYRRSHFKKPRPVDDPAD 175
+DS A Y+ ++HFK + + D +
Sbjct: 129 AMVAAILTLSVDSFATSYFHKAHFKTSKRIGDGEE 163
>AT1G60960.1 | chr1:22445410-22447060 REVERSE LENGTH=426
Length = 425
Score = 194 bits (494), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 119/158 (75%)
Query: 239 RHRVVSQVLELGILVHSVIIGVSLGASLRPSSIRPLVGALSFHQFFEGIGLGGCIVQANF 298
RH VVSQVLELGI+ HS+IIG+SLG S P +IRPL+ ALSFHQFFEG LGGCI QA F
Sbjct: 268 RHIVVSQVLELGIVSHSIIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQF 327
Query: 299 KAKATVIMATFFSLTAPVGIALGIAIXXXXXXXXXTALVVEGVFNSAAAGILIYMSLVDL 358
+ K+ IMA FF+LT P+GI +G A+ ALV EG+ +S +AGIL+YM+LVDL
Sbjct: 328 RNKSATIMACFFALTTPIGIGIGTAVASSFNSHSVGALVTEGILDSLSAGILVYMALVDL 387
Query: 359 LAADFNNPKLQTNTKLQLAVYLALFLGAGMMSLLAIWA 396
+AADF + K++ N +LQ+ Y+ LFLGAG+MS LAIWA
Sbjct: 388 IAADFLSTKMRCNFRLQIVSYVMLFLGAGLMSSLAIWA 425
>AT1G10970.1 | chr1:3665201-3666933 REVERSE LENGTH=409
Length = 408
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/166 (56%), Positives = 121/166 (72%)
Query: 231 DASVAETIRHRVVSQVLELGILVHSVIIGVSLGASLRPSSIRPLVGALSFHQFFEGIGLG 290
++ V RH VVSQ+LELGI+ HS+IIG+SLG S P +IRPL+ ALSFHQFFEG LG
Sbjct: 243 NSDVENGARHVVVSQILELGIVSHSIIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALG 302
Query: 291 GCIVQANFKAKATVIMATFFSLTAPVGIALGIAIXXXXXXXXXTALVVEGVFNSAAAGIL 350
GCI QA F+ K+ IMA FF+LT P+GI +G A+ ALV EG+ +S +AGIL
Sbjct: 303 GCISQAQFRNKSATIMACFFALTTPLGIGIGTAVASSFNSHSPGALVTEGILDSLSAGIL 362
Query: 351 IYMSLVDLLAADFNNPKLQTNTKLQLAVYLALFLGAGMMSLLAIWA 396
+YM+LVDL+AADF + ++ N +LQ+ Y+ LFLGAG+MS LAIWA
Sbjct: 363 VYMALVDLIAADFLSKRMSCNLRLQVVSYVMLFLGAGLMSALAIWA 408
>AT2G04032.1 | chr2:1289944-1291251 FORWARD LENGTH=366
Length = 365
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/319 (36%), Positives = 165/319 (51%), Gaps = 34/319 (10%)
Query: 81 RSFAALRPDGDXXXXXXXXXXXXILATGMVHILPAAFDALASPCXXXXXXXXXFPFAGLV 140
RS AL PD + ILATG +H+LP +FD L S C FPFA +
Sbjct: 78 RSIPALGPDREMSVIVKTLASGVILATGFMHVLPDSFDDLTSKCLPEDPWQK-FPFATFI 136
Query: 141 XXXXXXXXXXIDSVA-AGYYRRSHFKKPR--PVDDPADAARXXXXXXXXXXXXXXXXXXX 197
I+S A Y RR+ ++ P+++ +++
Sbjct: 137 TMISALLVLMIESFAMCAYARRTSKREGEVVPLENGSNSVDTQNDIQTLENGSSYVEKQE 196
Query: 198 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEDASVAETIRHRVVSQVLELGILVHSVI 257
ED + +E +R++V++Q+LELGI+VHSV+
Sbjct: 197 KVN-----------------------------EDKT-SELLRNKVIAQILELGIVVHSVV 226
Query: 258 IGVSLGASLRPSSIRPLVGALSFHQFFEGIGLGGCIVQANFKAKATVIMATFFSLTAPVG 317
IG+++GAS +++ L+ AL FHQ FEG+GLGG I+QA FK+K M FFS+T P G
Sbjct: 227 IGLAMGASDNKCTVQSLIAALCFHQLFEGMGLGGSILQAQFKSKTNWTMVFFFSVTTPFG 286
Query: 318 IALGIAIXXXXXXXXXTALVVEGVFNSAAAGILIYMSLVDLLAADFNNPKLQTNTKLQLA 377
I LG+AI TAL+V GV N+ +AG+LIYM+LV+LLA +F PK+Q N KL +
Sbjct: 287 IVLGMAIQKIYDETSPTALIVVGVLNACSAGLLIYMALVNLLAHEFFGPKIQGNIKLHVL 346
Query: 378 VYLALFLGAGMMSLLAIWA 396
Y+A F GA MSL+A WA
Sbjct: 347 GYVATFTGAAGMSLMAKWA 365
>AT5G62160.1 | chr5:24960107-24961263 FORWARD LENGTH=356
Length = 355
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 156/296 (52%), Gaps = 33/296 (11%)
Query: 104 ILATGMVHILPAAFDALASPCXXXXXXXXXFPFAGLVXXXXXXXXXXIDSVAAGYYRRSH 163
ILATG VHILP A ++L S C FP GLV I+S A+GY RS
Sbjct: 90 ILATGFVHILPDATESLTSSCLGEEPPWGDFPMTGLVAMAASILTMLIESFASGYLNRSR 149
Query: 164 FK---KPRPVDDPADAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 220
K PV +
Sbjct: 150 LAKEGKTLPVSTGGEEEHAHTGSAHTHASQGHSHGSLLI--------------------- 188
Query: 221 XXXXXXXXPEDASVAETIRHRVVSQVLELGILVHSVIIGVSLGASLRPSSIRPLVGALSF 280
P+D + +R ++V+Q+LELGI+VHSVIIG+SLGAS S+I+PL+ A++F
Sbjct: 189 --------PQDDDHID-MRKKIVTQILELGIVVHSVIIGISLGASPSVSTIKPLIAAITF 239
Query: 281 HQFFEGIGLGGCIVQANFKAKATVIMATFFSLTAPVGIALGIAIXXXXXXXXXTALVVEG 340
HQ FEG GLGGCI +A F+ K +M FF+LTAP+GI +GI + AL V G
Sbjct: 240 HQLFEGFGLGGCISEAKFRVKKIWVMLMFFALTAPIGIGIGIGVAEIYNENSPMALKVSG 299
Query: 341 VFNSAAAGILIYMSLVDLLAADFNNPKLQTNTKLQLAVYLALFLGAGMMSLLAIWA 396
N+ A+GILIYM+LVDL+A F N K Q++ K+Q+A ++L +GAG+MSLLAIWA
Sbjct: 300 FLNATASGILIYMALVDLVAPLFMNQKTQSSMKIQVACSVSLVVGAGLMSLLAIWA 355
>AT4G33020.1 | chr4:15932603-15934267 REVERSE LENGTH=345
Length = 344
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/159 (55%), Positives = 117/159 (73%)
Query: 238 IRHRVVSQVLELGILVHSVIIGVSLGASLRPSSIRPLVGALSFHQFFEGIGLGGCIVQAN 297
+RH VVSQ+LE+GI+ HS+IIG+SLG S P +IRPL+ ALSFHQFFEG LGGC+ +A
Sbjct: 186 VRHVVVSQILEMGIVSHSIIIGISLGVSHSPCTIRPLLLALSFHQFFEGFALGGCVAEAR 245
Query: 298 FKAKATVIMATFFSLTAPVGIALGIAIXXXXXXXXXTALVVEGVFNSAAAGILIYMSLVD 357
+ + +MA FF++T P+G+A+G AI ALV EGV +S +AGIL+YM+LVD
Sbjct: 246 LTPRGSAMMAFFFAITTPIGVAVGTAIASSYNSYSVAALVAEGVLDSLSAGILVYMALVD 305
Query: 358 LLAADFNNPKLQTNTKLQLAVYLALFLGAGMMSLLAIWA 396
L+AADF + K+ + ++Q+ Y LFLGAGMMS LAIWA
Sbjct: 306 LIAADFLSKKMSVDFRVQVVSYCFLFLGAGMMSALAIWA 344
>AT4G19690.2 | chr4:10707487-10708723 FORWARD LENGTH=348
Length = 347
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 119/167 (71%)
Query: 230 EDASVAETIRHRVVSQVLELGILVHSVIIGVSLGASLRPSSIRPLVGALSFHQFFEGIGL 289
+D+S A+ +R+RV++ VLELGI+VHSV+IG+SLGA+ +I+ L+ AL FHQ FEG+GL
Sbjct: 181 DDSSNAQLLRYRVIAMVLELGIIVHSVVIGLSLGATSDTCTIKGLIAALCFHQMFEGMGL 240
Query: 290 GGCIVQANFKAKATVIMATFFSLTAPVGIALGIAIXXXXXXXXXTALVVEGVFNSAAAGI 349
GGCI+QA + +MA FF++T P GIALGIA+ AL+ G+ N+ +AG+
Sbjct: 241 GGCILQAEYTNMKKFVMAFFFAVTTPFGIALGIALSTVYQDNSPKALITVGLLNACSAGL 300
Query: 350 LIYMSLVDLLAADFNNPKLQTNTKLQLAVYLALFLGAGMMSLLAIWA 396
LIYM+LVDLLAA+F PKLQ + K+Q +A LG G MS++A WA
Sbjct: 301 LIYMALVDLLAAEFMGPKLQGSIKMQFKCLIAALLGCGGMSIIAKWA 347
>AT1G31260.1 | chr1:11175559-11177362 REVERSE LENGTH=365
Length = 364
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 116/167 (69%)
Query: 230 EDASVAETIRHRVVSQVLELGILVHSVIIGVSLGASLRPSSIRPLVGALSFHQFFEGIGL 289
E S + +R+R+++ VLELGI+V S++IG+S+G + +I+ LV AL FHQ FEG+GL
Sbjct: 198 ELGSYLQLLRYRILAIVLELGIVVQSIVIGLSVGDTNNTCTIKGLVAALCFHQMFEGMGL 257
Query: 290 GGCIVQANFKAKATVIMATFFSLTAPVGIALGIAIXXXXXXXXXTALVVEGVFNSAAAGI 349
GGCI+QA + +MA FF++T P G+ LG+A+ +L+ G+ N+++AG+
Sbjct: 258 GGCILQAEYGWVKKAVMAFFFAVTTPFGVVLGMALSKTYKENSPESLITVGLLNASSAGL 317
Query: 350 LIYMSLVDLLAADFNNPKLQTNTKLQLAVYLALFLGAGMMSLLAIWA 396
LIYM+LVDLLAADF K+Q + KLQL Y A+ LGAG MS++A WA
Sbjct: 318 LIYMALVDLLAADFMGQKMQRSIKLQLKSYAAVLLGAGGMSVMAKWA 364
>AT2G30080.1 | chr2:12838730-12840112 REVERSE LENGTH=342
Length = 341
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 115/166 (69%), Gaps = 7/166 (4%)
Query: 238 IRHRVVSQVLELGILVHSVIIGVSLGASLRPSSIRPLVGALSFHQFFEGIGLGGCIVQAN 297
++ R+VSQVLE+GI+ HSVIIGV++G S +IRPL+ ALSFHQ FEG+GLGGCI QA
Sbjct: 176 MKQRLVSQVLEIGIIFHSVIIGVTMGMSQNKCTIRPLIAALSFHQIFEGLGLGGCIAQAG 235
Query: 298 FKAKATVIMATFFSLTAPVGIALGIAIXXXXXXXXX--TALVVEGVFNSAAAGILIYMSL 355
FKA V M F++T P+GI LG+ I AL++EG+ S ++GILIYM+L
Sbjct: 236 FKAGTVVYMCLMFAVTTPLGIVLGMVIFAATGYDDQNPNALIMEGLLGSFSSGILIYMAL 295
Query: 356 VDLLAADFNNPKL-----QTNTKLQLAVYLALFLGAGMMSLLAIWA 396
VDL+A DF + K+ ++ ++L+ ++AL LG+ MSLLA+WA
Sbjct: 296 VDLIALDFFHNKMLTTCGESGSRLKKLCFVALVLGSASMSLLALWA 341
>AT4G19680.2 | chr4:10703385-10704621 FORWARD LENGTH=351
Length = 350
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 111/162 (68%)
Query: 235 AETIRHRVVSQVLELGILVHSVIIGVSLGASLRPSSIRPLVGALSFHQFFEGIGLGGCIV 294
+ +R++V++ VLE+GIL HSV+IG+SLGA+ +I+ L+ AL FH FEGIGLGGCI+
Sbjct: 189 GQLLRYQVIAMVLEVGILFHSVVIGLSLGATNDSCTIKGLIIALCFHHLFEGIGLGGCIL 248
Query: 295 QANFKAKATVIMATFFSLTAPVGIALGIAIXXXXXXXXXTALVVEGVFNSAAAGILIYMS 354
QA+F +MA FF+ T P GI LGIA+ TAL+ G+ N+ +AG+LIYM+
Sbjct: 249 QADFTNVKKFLMAFFFTGTTPCGIFLGIALSSIYRDNSPTALITIGLLNACSAGMLIYMA 308
Query: 355 LVDLLAADFNNPKLQTNTKLQLAVYLALFLGAGMMSLLAIWA 396
LVDLLA +F LQ + KLQ+ + A LG +MS++A+WA
Sbjct: 309 LVDLLATEFMGSMLQGSIKLQIKCFTAALLGCAVMSVVAVWA 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Query: 81 RSFAALRPDGDXXXXXXXXXXXXILATGMVHILPAAFDALASPCXXXXXXXXXFPFAGLV 140
R + LRPDG+ IL TG +H+LP +F+ L+S C FPFAG V
Sbjct: 69 RYISFLRPDGNGFMIVKCFSSGIILGTGFMHVLPDSFEMLSSKC-LSDNPWHKFPFAGFV 127
Query: 141 XXXXXXXXXXIDSVAAGYYRRSHFKKPRPVDD 172
IDS+ Y + P P ++
Sbjct: 128 AMMSGLVTLAIDSITTSLYTGKNSVGPVPDEE 159
>AT5G45105.2 | chr5:18223453-18224946 REVERSE LENGTH=300
Length = 299
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 56/103 (54%)
Query: 294 VQANFKAKATVIMATFFSLTAPVGIALGIAIXXXXXXXXXTALVVEGVFNSAAAGILIYM 353
VQ A ++ F S+ G +A TAL+ G+ N+ +AG+LIYM
Sbjct: 197 VQPTTHALLKALLQLFASIKCSKGWVSAVASFSVYKDNSPTALITVGLLNACSAGLLIYM 256
Query: 354 SLVDLLAADFNNPKLQTNTKLQLAVYLALFLGAGMMSLLAIWA 396
+LVDLLAA+F LQ + KLQL + A LG G MS+LA WA
Sbjct: 257 ALVDLLAAEFMGSMLQRSVKLQLNCFGAALLGCGGMSVLAKWA 299
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.139 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,274,130
Number of extensions: 116485
Number of successful extensions: 302
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 294
Number of HSP's successfully gapped: 20
Length of query: 396
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 295
Effective length of database: 8,337,553
Effective search space: 2459578135
Effective search space used: 2459578135
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 113 (48.1 bits)