BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0411300 Os03g0411300|J075091K10
(158 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0411300 EF-Hand type domain containing protein 249 4e-67
Os11g0495700 179 1e-45
Os09g0483300 Calcium-binding EF-hand domain containing protein 112 8e-26
Os09g0482840 Calcium-binding EF-hand domain containing protein 112 9e-26
Os09g0483500 Calcium-binding EF-hand domain containing protein 112 1e-25
Os09g0483100 EF-Hand type domain containing protein 109 7e-25
Os09g0482800 Calcium-binding EF-hand domain containing protein 103 6e-23
AK121706 103 6e-23
Os08g0502600 Calcium-binding EF-hand domain containing protein 95 2e-20
Os07g0173600 72 2e-13
>Os03g0411300 EF-Hand type domain containing protein
Length = 158
Score = 249 bits (637), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 129/129 (100%), Positives = 129/129 (100%)
Query: 1 MSVVILDGSTVRGFVADDDAFARSVDARFEALDANGDGVLSRAELRRALESFRLLDGAGF 60
MSVVILDGSTVRGFVADDDAFARSVDARFEALDANGDGVLSRAELRRALESFRLLDGAGF
Sbjct: 1 MSVVILDGSTVRGFVADDDAFARSVDARFEALDANGDGVLSRAELRRALESFRLLDGAGF 60
Query: 61 GSAEPAPLPAEVSALYDSVFEQFDADHSGAVDRAEFRDQMRRIMLAVADGLGSQPLQVAV 120
GSAEPAPLPAEVSALYDSVFEQFDADHSGAVDRAEFRDQMRRIMLAVADGLGSQPLQVAV
Sbjct: 61 GSAEPAPLPAEVSALYDSVFEQFDADHSGAVDRAEFRDQMRRIMLAVADGLGSQPLQVAV 120
Query: 121 DDEGGSFLL 129
DDEGGSFLL
Sbjct: 121 DDEGGSFLL 129
>Os11g0495700
Length = 327
Score = 179 bits (453), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/108 (84%), Positives = 99/108 (91%)
Query: 1 MSVVILDGSTVRGFVADDDAFARSVDARFEALDANGDGVLSRAELRRALESFRLLDGAGF 60
MSVVILDGSTVRGFVADDDAFARSVDARFEAL+ NGDGVLS A+LRRALESF LL GAGF
Sbjct: 1 MSVVILDGSTVRGFVADDDAFARSVDARFEALNTNGDGVLSCAKLRRALESFLLLYGAGF 60
Query: 61 GSAEPAPLPAEVSALYDSVFEQFDADHSGAVDRAEFRDQMRRIMLAVA 108
GSA+ AP+PAEVSALYDS+FEQFDADHS AVDRAEFRD+MR I+ + A
Sbjct: 61 GSAQLAPVPAEVSALYDSIFEQFDADHSSAVDRAEFRDRMRCILGSCA 108
>Os09g0483300 Calcium-binding EF-hand domain containing protein
Length = 140
Score = 112 bits (281), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 90/130 (69%), Gaps = 5/130 (3%)
Query: 1 MSVVILDGSTVRGFVADDDAFARSVDARFEALDANGDGVLSRAELRRALESFRLLDGAGF 60
MSV ILDG TVR FV D+ AF SVD RF ALDAN DGVLS AE+ L S R+L+ F
Sbjct: 1 MSVEILDGKTVRSFVEDEGAFNSSVDGRFAALDANRDGVLSYAEMAGELMSLRVLE-KHF 59
Query: 61 GSAE-PAPLPA-EVSALYDSVFEQFDADHSGAVDRAEFRDQMRRIMLAVADGLGSQPLQV 118
G+ E A + A E++ALY +F +FD D SG VD EFR +M+ ++LAVA+GLG P+Q+
Sbjct: 60 GADEDEAAMGADELAALYRGLFARFDRDGSGGVDLEEFRAEMKEVLLAVANGLGFLPVQM 119
Query: 119 AVDDEGGSFL 128
V++ GSFL
Sbjct: 120 VVEE--GSFL 127
>Os09g0482840 Calcium-binding EF-hand domain containing protein
Length = 137
Score = 112 bits (281), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 84/128 (65%), Gaps = 3/128 (2%)
Query: 1 MSVVILDGSTVRGFVADDDAFARSVDARFEALDANGDGVLSRAELRRALESFRLLDGAGF 60
MSV ILDG TV FV D+ AF SVD RF ALD N DG+LS AE+ L S R+LD F
Sbjct: 1 MSVEILDGKTVLSFVEDEGAFNSSVDGRFAALDTNRDGLLSYAEMANELMSLRVLD-KHF 59
Query: 61 GSAEPAPLPAEVSALYDSVFEQFDADHSGAVDRAEFRDQMRRIMLAVADGLGSQPLQVAV 120
G E A E+ LY +F +FD D SGAVD EFR +M+ ++LAVA+GLG P+Q+ V
Sbjct: 60 GVDEAAMGADELVELYHGLFLRFDRDGSGAVDLEEFRAEMKEVLLAVANGLGFLPVQMVV 119
Query: 121 DDEGGSFL 128
++ GSFL
Sbjct: 120 EE--GSFL 125
>Os09g0483500 Calcium-binding EF-hand domain containing protein
Length = 137
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 85/128 (66%), Gaps = 3/128 (2%)
Query: 1 MSVVILDGSTVRGFVADDDAFARSVDARFEALDANGDGVLSRAELRRALESFRLLDGAGF 60
MSV ILDG T+R FV D+ AF SVD RF ALD N DG+LS +E+ + L S R+L+ F
Sbjct: 1 MSVEILDGKTIRSFVEDEGAFNSSVDGRFAALDTNRDGLLSYSEMAKELMSLRVLE-KHF 59
Query: 61 GSAEPAPLPAEVSALYDSVFEQFDADHSGAVDRAEFRDQMRRIMLAVADGLGSQPLQVAV 120
G E A E+ +Y ++ +FD D +G VD EFR +M+ +MLAVA+GLG P+Q+ V
Sbjct: 60 GVDEAAMSSDELVEMYRGLYARFDHDGNGTVDLEEFRAEMKEVMLAVANGLGFLPVQMVV 119
Query: 121 DDEGGSFL 128
++ GSFL
Sbjct: 120 EE--GSFL 125
>Os09g0483100 EF-Hand type domain containing protein
Length = 138
Score = 109 bits (273), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 87/129 (67%), Gaps = 4/129 (3%)
Query: 1 MSVVILDGSTVRGFVADDDAFARSVDARFEALDANGDGVLSRAELRRALESFRLLDGAGF 60
MSV ILDG TVR FV D+ AF SVD RF ALDAN DG+LS E+ L S R+L+ F
Sbjct: 1 MSVEILDGKTVRSFVEDEGAFNSSVDGRFAALDANRDGLLSYTEMAGELMSLRVLE-KHF 59
Query: 61 GSAEPAPLPA-EVSALYDSVFEQFDADHSGAVDRAEFRDQMRRIMLAVADGLGSQPLQVA 119
G + A + A E+ LY +F +FD D +GAVD EFR +M+ ++LAVA+GLG P+Q+
Sbjct: 60 GVDDEAAMGADELVELYRGLFARFDRDGNGAVDLEEFRAEMKEMLLAVANGLGFLPVQMV 119
Query: 120 VDDEGGSFL 128
V++ GSFL
Sbjct: 120 VEE--GSFL 126
>Os09g0482800 Calcium-binding EF-hand domain containing protein
Length = 137
Score = 103 bits (257), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 81/128 (63%), Gaps = 3/128 (2%)
Query: 1 MSVVILDGSTVRGFVADDDAFARSVDARFEALDANGDGVLSRAELRRALESFRLLDGAGF 60
MSV ILDG TV FV D+ AF +VD RF ALD + DG LS A++ L S R+L+ F
Sbjct: 1 MSVEILDGRTVESFVEDEGAFNSTVDDRFAALDGDRDGRLSYADMAGELMSLRVLE-THF 59
Query: 61 GSAEPAPLPAEVSALYDSVFEQFDADHSGAVDRAEFRDQMRRIMLAVADGLGSQPLQVAV 120
G A AE+ LY +F +FD D GAVDR EFR +M+ +MLAVA GLG P+Q+ V
Sbjct: 60 GVDGAAATDAELVDLYRGLFARFDRDGDGAVDREEFRAEMKEVMLAVASGLGFLPVQMVV 119
Query: 121 DDEGGSFL 128
E GSFL
Sbjct: 120 --EEGSFL 125
>AK121706
Length = 137
Score = 103 bits (257), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 81/128 (63%), Gaps = 3/128 (2%)
Query: 1 MSVVILDGSTVRGFVADDDAFARSVDARFEALDANGDGVLSRAELRRALESFRLLDGAGF 60
MSV ILDG TV FV D+ AF +VD RF ALD + DG LS A++ L S R+L+ F
Sbjct: 1 MSVEILDGRTVESFVEDEGAFNSTVDDRFAALDGDRDGRLSYADMAGELMSLRVLE-THF 59
Query: 61 GSAEPAPLPAEVSALYDSVFEQFDADHSGAVDRAEFRDQMRRIMLAVADGLGSQPLQVAV 120
G A AE+ LY +F +FD D GAVDR EFR +M+ +MLAVA GLG P+Q+ V
Sbjct: 60 GVDGAAATDAELVDLYRGLFARFDRDGDGAVDREEFRAEMKEVMLAVASGLGFLPVQMVV 119
Query: 121 DDEGGSFL 128
E GSFL
Sbjct: 120 --EEGSFL 125
>Os08g0502600 Calcium-binding EF-hand domain containing protein
Length = 135
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 1 MSVVILDGSTVRGFVADDDAFARSVDARFEALDANGDGVLSRAELRRALESFRLLDGAGF 60
MSV I+DGSTVR FV D+ AF SVD RF ALDA+ DGVLS A++ L + R+LD
Sbjct: 1 MSVEIVDGSTVRSFVDDEAAFNASVDGRFAALDADRDGVLSYADMSGELMALRVLDTH-- 58
Query: 61 GSAEPAPLPAEVSALYDSVFEQFDADHSGAVDRAEFRDQMRRIMLAVADGLGSQPLQVAV 120
LY +F +FD D G V EFR +M+ +ML VA+GLG P+Q+ V
Sbjct: 59 -FGVDDGHGGADDGLYRGLFARFDRDGDGKVGLHEFRAEMKEVMLVVANGLGFLPVQMVV 117
Query: 121 DDEGGSFL 128
+D GSFL
Sbjct: 118 ED--GSFL 123
>Os07g0173600
Length = 113
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/45 (88%), Positives = 40/45 (88%), Gaps = 2/45 (4%)
Query: 1 MSVVILD--GSTVRGFVADDDAFARSVDARFEALDANGDGVLSRA 43
MSVVILD STVRGFVADDDAF RSVDARFEALDANGDGVLS A
Sbjct: 1 MSVVILDLDESTVRGFVADDDAFGRSVDARFEALDANGDGVLSLA 45
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.137 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,552,652
Number of extensions: 184363
Number of successful extensions: 818
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 806
Number of HSP's successfully gapped: 10
Length of query: 158
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 65
Effective length of database: 12,179,899
Effective search space: 791693435
Effective search space used: 791693435
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 152 (63.2 bits)