BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0397400 Os03g0397400|AK069928
(437 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0397400 Similar to Low affinity calcium transporter CA... 765 0.0
Os04g0653200 Similar to Low affinity calcium transporter CA... 590 e-169
Os01g0557500 Cation/proton exchanger 1a 332 5e-91
Os05g0594200 Similar to Cation/proton exchanger 1a 331 7e-91
Os02g0314100 Calcium/proton exchanger family protein 256 3e-68
AK072134 137 2e-32
Os02g0138900 Sodium/calcium exchanger membrane region domai... 135 5e-32
>Os03g0397400 Similar to Low affinity calcium transporter CAX2 (Fragment)
Length = 437
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/406 (94%), Positives = 384/406 (94%)
Query: 32 KMQALDFEHIGSLAAVAESLSTGSKWRRALTSVRVVILQAKINVLLPFGPLAVMLHYLSA 91
KMQALDFEHIGSLAAVAESLSTGSKWRRALTSVRVVILQAKINVLLPFGPLAVMLHYLSA
Sbjct: 32 KMQALDFEHIGSLAAVAESLSTGSKWRRALTSVRVVILQAKINVLLPFGPLAVMLHYLSA 91
Query: 92 NHQGWVFLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNG 151
NHQGWVFLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNG
Sbjct: 92 NHQGWVFLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNG 151
Query: 152 MIRVVQQSLLGSILSNMLLVLGCAFFAGGLVHPSRDQVFNKASAVVNSGLLLMAVLGLMF 211
MIRVVQQSLLGSILSNMLLVLGCAFFAGGLVHPSRDQVFNKASAVVNSGLLLMAVLGLMF
Sbjct: 152 MIRVVQQSLLGSILSNMLLVLGCAFFAGGLVHPSRDQVFNKASAVVNSGLLLMAVLGLMF 211
Query: 212 PAVLHFTHSEVQYGKSEVSLSRFSSCIMLVAYASYLFFQLKSQRSLYSPXXXXXXXXXXX 271
PAVLHFTHSEVQYGKSEVSLSRFSSCIMLVAYASYLFFQLKSQRSLYSP
Sbjct: 212 PAVLHFTHSEVQYGKSEVSLSRFSSCIMLVAYASYLFFQLKSQRSLYSPIGEQEEEVTED 271
Query: 272 XXXXXXXXXXXAICWLFVLTIWISILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAA 331
AICWLFVLTIWISILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAA
Sbjct: 272 EEEEKEITQGEAICWLFVLTIWISILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAA 331
Query: 332 EHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWIMGQQMDLNFQLFETATLF 391
EHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWIMGQQMDLNFQLFETATLF
Sbjct: 332 EHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWIMGQQMDLNFQLFETATLF 391
Query: 392 ITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPDSSNNK 437
ITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPDSSNNK
Sbjct: 392 ITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPDSSNNK 437
>Os04g0653200 Similar to Low affinity calcium transporter CAX2 (Fragment)
Length = 417
Score = 590 bits (1522), Expect = e-169, Method: Compositional matrix adjust.
Identities = 293/381 (76%), Positives = 334/381 (87%), Gaps = 3/381 (0%)
Query: 58 RRALTSVRVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPLAERLGYATE 117
AL S+R+VI +K+N+LLPFGP +++LHY ++ H G VFLFS++GITPLAERLGYATE
Sbjct: 38 ESALRSIRIVIFTSKLNLLLPFGPASIILHYTTSRH-GLVFLFSMLGITPLAERLGYATE 96
Query: 118 QLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAFF 177
QLA+YTGPT+GGLLNATFGNATEMII++YALKNGMIRVVQQSLLGSILSNMLLV+GCAFF
Sbjct: 97 QLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFF 156
Query: 178 AGGLVHPSRDQVFNKASAVVNSGLLLMAVLGLMFPAVLHFTHSEVQYGKSEVSLSRFSSC 237
AGG+VH ++DQVF+KA+AVVNSGLLLMAV+GLMFPAVLHFTHSEV+ G SEVSLSRFSSC
Sbjct: 157 AGGIVHRNKDQVFSKATAVVNSGLLLMAVMGLMFPAVLHFTHSEVRQGASEVSLSRFSSC 216
Query: 238 IMLVAYASYLFFQLKSQRSLYSPXXXXXXXXXXXXXXXXXXXXXX--AICWLFVLTIWIS 295
IMLVAYASYL+FQL + + YSP +I WL +LT+W+S
Sbjct: 217 IMLVAYASYLYFQLSGRNNAYSPIGSEEMPNEDAAEEDEESEIGMWESIAWLAMLTLWVS 276
Query: 296 ILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGS 355
ILS YLV+AI+GAS+SLN+PVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGS
Sbjct: 277 ILSEYLVNAIEGASDSLNLPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGS 336
Query: 356 STQISMFVIPFCVVIGWIMGQQMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLI 415
STQISMFVIPFCVVIGW+MGQ+MDLNFQLFETATLFITVLVVAFMLQ+G +NY KGLMLI
Sbjct: 337 STQISMFVIPFCVVIGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLI 396
Query: 416 LCYLIVAASFFVHVDPDSSNN 436
LCYLIVAASFFVHVDP SS++
Sbjct: 397 LCYLIVAASFFVHVDPQSSDD 417
>Os01g0557500 Cation/proton exchanger 1a
Length = 451
Score = 332 bits (850), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 190/385 (49%), Positives = 259/385 (67%), Gaps = 8/385 (2%)
Query: 58 RRALTSVRVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPLAERLGYATE 117
R L +++ V L K+ VL P PLA+ + Q WVF SL+G+ PLAER+ + TE
Sbjct: 51 RPLLANLQEVFLATKLAVLFPAVPLAIAAQCFRFD-QVWVFALSLLGLIPLAERVSFLTE 109
Query: 118 QLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAFF 177
Q+ALYTGPT+GGLLNAT GNATE+II+L+AL G I VV+ SLLGS+LSN+LLVLG + F
Sbjct: 110 QIALYTGPTVGGLLNATCGNATELIIALFALLKGKIEVVKCSLLGSVLSNLLLVLGTSLF 169
Query: 178 AGGLVHPSRDQVFNKASAVVNSGLLLMAVLGLMFPAVLHFTHSEVQYGKSE------VSL 231
GG+V+ Q +++ + V++ LL +AVL P +L + + ++ S + L
Sbjct: 170 CGGVVNLGARQPYDRNQSDVSTALLFLAVLCHSAPLLLRYAVAAGEHSVSATSAAASLDL 229
Query: 232 SRFSSCIMLVAYASYLFFQLKSQRSLYSPXXXXXXXXXXXXXXXXXXXXXXAICWLFVLT 291
SR S +ML +Y +YLFFQLK+ R L+ P A+ WL ++T
Sbjct: 230 SRACSFVMLASYVAYLFFQLKTHRQLFEPQEVDGGDAGDDDEEPALGFAS-ALFWLALMT 288
Query: 292 IWISILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGV 351
IS+LS Y+V I+ S+S + V+FIS+ILLPIVGNAAEHA AI+FA+K+KLDITLGV
Sbjct: 289 AVISVLSEYVVGTIEPTSQSWGLSVSFISIILLPIVGNAAEHAGAIIFALKNKLDITLGV 348
Query: 352 AIGSSTQISMFVIPFCVVIGWIMGQQMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKG 411
A+GS+TQISMFV+P V++ WIMG QMDL+F+L ET +LF+ VLV AF LQ+GTS+Y KG
Sbjct: 349 ALGSATQISMFVVPLSVLVAWIMGVQMDLDFKLLETGSLFMAVLVTAFTLQDGTSHYLKG 408
Query: 412 LMLILCYLIVAASFFVHVDPDSSNN 436
++L+LCY+++ A FFV P N
Sbjct: 409 ILLLLCYIVIGACFFVARQPAGHAN 433
>Os05g0594200 Similar to Cation/proton exchanger 1a
Length = 453
Score = 331 bits (848), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 174/341 (51%), Positives = 235/341 (68%), Gaps = 7/341 (2%)
Query: 94 QGWVFLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMI 153
Q WVF+ SLIG+ PLAERL + TEQ+A YTGPT+GGLLNATFGN TE+II+L AL+ G I
Sbjct: 94 QVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKI 153
Query: 154 RVVQQSLLGSILSNMLLVLGCAFFAGGLVHPSRDQVFNKASAVVNSGLLLMAVLGLMFPA 213
VV+ SLLGSILSN+LLVLG + F G+ + Q ++ A VN+ LL++AVL P
Sbjct: 154 EVVKCSLLGSILSNLLLVLGTSLFLAGIANLRAHQPYDTKQAHVNTALLMLAVLCHSLPL 213
Query: 214 VLHFTHSEVQY----GKSEVSLSRFSSCIMLVAYASYLFFQLKSQRSLYSPXXXXXXXXX 269
+L + + + G + + LSR S +ML+AY +YLFFQL + R L+ P
Sbjct: 214 MLRYAVTSGDHAIVSGDAALHLSRACSILMLIAYLAYLFFQLNTHRQLFEPQQVEDDDDD 273
Query: 270 XXXXXXXXXXX---XXAICWLFVLTIWISILSGYLVDAIQGASESLNMPVAFISVILLPI 326
A+ WL ++T+ ++LSGY+V I+ ASES + V+FIS+ILLPI
Sbjct: 274 DLVIAQDDEPVLGFSSAMIWLALMTLLTALLSGYVVSTIEAASESWELSVSFISIILLPI 333
Query: 327 VGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWIMGQQMDLNFQLFE 386
VGNAAEHA A++FA+K+K+DITLGV++GS+TQISMFV+P V++ W MG MDL+F L E
Sbjct: 334 VGNAAEHAGAVIFALKNKMDITLGVSLGSATQISMFVVPVSVIVAWTMGIPMDLDFNLLE 393
Query: 387 TATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFV 427
T +LF+ +LV AF LQEG S+Y KGL+L+LCY +++ FFV
Sbjct: 394 TGSLFLAILVTAFTLQEGESHYLKGLILVLCYAVISVCFFV 434
>Os02g0314100 Calcium/proton exchanger family protein
Length = 450
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/365 (42%), Positives = 225/365 (61%), Gaps = 5/365 (1%)
Query: 67 VILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPLAERLGYATEQLALYTGPT 126
V+L K+ L PLAV L + WVF FSLIG+ PLAER+ + +E +A GPT
Sbjct: 75 VLLGTKLYPLFSAVPLAVAAESLRLG-RVWVFAFSLIGLAPLAERVSFLSEHIANTVGPT 133
Query: 127 IGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFAGGLVHPSR 186
GG++NAT GN E+II+L+AL + +++ SLLGSILSN+LLVLG + GG+V+ +
Sbjct: 134 AGGIMNATCGNVPELIIALFALHKNKMEILKWSLLGSILSNLLLVLGSSLLFGGIVNIGK 193
Query: 187 DQVFNKASAVVNSGLLLMAVLGLMFPAVLHFTHS--EVQYGKSEVSLSRFSSCIMLVAYA 244
++ +K A V+ GLLL+ VL + V +T S + S + LSR + +ML+AY
Sbjct: 194 ERPLDKRQADVSIGLLLLGVLCHIATLVSKYTSSTGDSINSSSVMQLSRSCAIVMLIAYF 253
Query: 245 SYLFFQLKSQRSLYS--PXXXXXXXXXXXXXXXXXXXXXXAICWLFVLTIWISILSGYLV 302
L FQLK+ R ++ A+ WL + + ++LS Y+V
Sbjct: 254 GSLMFQLKTHRQIFELEEDSSDSSSSEDDATDKSVIGFASAMVWLIGMAVVTAMLSSYVV 313
Query: 303 DAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMF 362
I+ ASES+ +PV FIS+ILLPIVGNAAEHA AI+FA K+K+DI+LG+ +GS+TQISM
Sbjct: 314 TTIEEASESMGIPVRFISIILLPIVGNAAEHAGAIIFAFKNKIDISLGITLGSATQISML 373
Query: 363 VIPFCVVIGWIMGQQMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVA 422
V+P +++ W+ MDL+F L ET +L + V+ AF LQ+ +Y KGL L+ Y+++A
Sbjct: 374 VVPVILIVSWVNAIPMDLDFNLLETGSLAMAVITTAFTLQDDKWHYLKGLNLVFSYIVIA 433
Query: 423 ASFFV 427
FFV
Sbjct: 434 VCFFV 438
>AK072134
Length = 183
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 87/114 (76%)
Query: 94 QGWVFLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMI 153
Q WVF+ SLIG+ PLAERL + TEQ+A YTGPT+GGLLNATFGN TE+II+L AL+ G I
Sbjct: 43 QVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKI 102
Query: 154 RVVQQSLLGSILSNMLLVLGCAFFAGGLVHPSRDQVFNKASAVVNSGLLLMAVL 207
VV+ SLLGSILSN+LLVLG + F G+ + Q ++ A VN+ LL++AVL
Sbjct: 103 EVVKCSLLGSILSNLLLVLGTSLFLAGIANLRAHQPYDTKQAHVNTALLMLAVL 156
>Os02g0138900 Sodium/calcium exchanger membrane region domain containing protein
Length = 129
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/101 (65%), Positives = 81/101 (80%)
Query: 94 QGWVFLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMI 153
+GWVF S++GI PLAERLG+ATEQLAL+TGP +G LLN+ FGNATE+IIS++AL G +
Sbjct: 20 KGWVFPLSMLGIIPLAERLGFATEQLALFTGPKVGRLLNSAFGNATELIISIHALSRGKL 79
Query: 154 RVVQQSLLGSILSNMLLVLGCAFFAGGLVHPSRDQVFNKAS 194
VVQQ LLGSILSN+LLVLG AFF+GGL Q F+K +
Sbjct: 80 HVVQQCLLGSILSNLLLVLGSAFFSGGLACGKTMQTFSKVT 120
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.139 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,569,638
Number of extensions: 348372
Number of successful extensions: 1022
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1010
Number of HSP's successfully gapped: 7
Length of query: 437
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 333
Effective length of database: 11,605,545
Effective search space: 3864646485
Effective search space used: 3864646485
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 157 (65.1 bits)