BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0789700 Os02g0789700|AK070029
(451 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0789700 Nucleotide-binding, alpha-beta plait domain co... 834 0.0
Os12g0223500 Nucleotide-binding, alpha-beta plait domain co... 481 e-136
Os08g0322400 Nucleotide-binding, alpha-beta plait domain co... 404 e-113
Os06g0157600 400 e-111
Os02g0721400 Conserved hypothetical protein 374 e-104
Os11g0664700 Conserved hypothetical protein 299 2e-81
Os02g0473100 292 4e-79
Os05g0254300 257 1e-68
Os12g0206200 248 5e-66
Os01g0695000 224 1e-58
Os02g0318300 215 6e-56
Os04g0181200 142 4e-34
Os07g0187100 141 9e-34
Os09g0133400 120 3e-27
Os08g0409000 100 3e-21
Os04g0107750 77 2e-14
Os04g0255100 73 6e-13
Os05g0437300 HnRNP-L/PTB/hephaestus splicing factor family ... 69 6e-12
Os01g0867800 HnRNP-L/PTB/hephaestus splicing factor family ... 69 9e-12
>Os02g0789700 Nucleotide-binding, alpha-beta plait domain containing protein
Length = 451
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/451 (91%), Positives = 413/451 (91%)
Query: 1 IVIYRWHLCERFGVIVLVRDNMVSEQSIRGVSGVEMKWESAGGQRNCQQLGGGVFGGDAH 60
IVIYRWHLCERFGVIVLVRDNMVSEQSIRGVSGVEMKWESAGGQRNCQQLGGGVFGGDAH
Sbjct: 1 IVIYRWHLCERFGVIVLVRDNMVSEQSIRGVSGVEMKWESAGGQRNCQQLGGGVFGGDAH 60
Query: 61 HLFDEMSTCPRGDSAAVLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALV 120
HLFDEMSTCPRGDSAAVLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALV
Sbjct: 61 HLFDEMSTCPRGDSAAVLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALV 120
Query: 121 SFMSSHDAERARSATHGRDIYDGGCLMDVQHVQMFPGDGATTTHTTCLTMVXXXXXXXXX 180
SFMSSHDAERARSATHGRDIYDGGCLMDVQHVQMFPGDGATTTHTTCLTMV
Sbjct: 121 SFMSSHDAERARSATHGRDIYDGGCLMDVQHVQMFPGDGATTTHTTCLTMVPSSATARPA 180
Query: 181 XXXXXXXXERVFXXXXXXXXXXXXXXXMVTSVPFNETKKAETDMDKAVENLDKTIQDLCT 240
ERVF MVTSVPFNETKKAETDMDKAVENLDKTIQDLCT
Sbjct: 181 AKSTAATPERVFPATTASSIPSITSAAMVTSVPFNETKKAETDMDKAVENLDKTIQDLCT 240
Query: 241 KIDRMLEAFRHTKVDLSLSKDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGMG 300
KIDRMLEAFRHTKVDLSLSKDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGMG
Sbjct: 241 KIDRMLEAFRHTKVDLSLSKDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGMG 300
Query: 301 TTIECSMKCENQLADDDGGKDMAKEEWMELMEVDTKFTTMYLCFRDPLLIINAIPPRNWS 360
TTIECSMKCENQLADDDGGKDMAKEEWMELMEVDTKFTTMYLCFRDPLLIINAIPPRNWS
Sbjct: 301 TTIECSMKCENQLADDDGGKDMAKEEWMELMEVDTKFTTMYLCFRDPLLIINAIPPRNWS 360
Query: 361 WCLSRDYFGVVGLSFVSLKLEVLYGCFDRSSEYTASXXXXXXWRAAIPRNKAEMTSGSRP 420
WCLSRDYFGVVGLSFVSLKLEVLYGCFDRSSEYTAS WRAAIPRNKAEMTSGSRP
Sbjct: 361 WCLSRDYFGVVGLSFVSLKLEVLYGCFDRSSEYTASPPPVPPWRAAIPRNKAEMTSGSRP 420
Query: 421 LPWLDPQLCQGSGGVVVKLLQPWPPLIQTSV 451
LPWLDPQLCQGSGGVVVKLLQPWPPLIQTSV
Sbjct: 421 LPWLDPQLCQGSGGVVVKLLQPWPPLIQTSV 451
>Os12g0223500 Nucleotide-binding, alpha-beta plait domain containing protein
Length = 297
Score = 481 bits (1237), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/294 (80%), Positives = 245/294 (83%)
Query: 18 VRDNMVSEQSIRGVSGVEMKWESAGGQRNCQQLGGGVFGGDAHHLFDEMSTCPRGDSAAV 77
VRDNMVSEQSIRGV GVEMKW+SAGGQRN QQ GGGVFGGDAHHLF+EM +CPRGDSAAV
Sbjct: 4 VRDNMVSEQSIRGVLGVEMKWKSAGGQRNSQQPGGGVFGGDAHHLFNEMPSCPRGDSAAV 63
Query: 78 LRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATHG 137
L VTVSQIIYPVTSEVLHQVY+TYGAVAVQVLAVSTWQVKALVSFMSSHDAERARS THG
Sbjct: 64 LCVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSTTHG 123
Query: 138 RDIYDGGCLMDVQHVQMFPGDGATTTHTTCLTMVXXXXXXXXXXXXXXXXXERVFXXXXX 197
DIYD GCL+D+QHVQMFPGDGAT THTTC TMV ERVF
Sbjct: 124 HDIYDEGCLLDMQHVQMFPGDGATATHTTCSTMVPSSATARPVAKSTAAAPERVFPATTA 183
Query: 198 XXXXXXXXXXMVTSVPFNETKKAETDMDKAVENLDKTIQDLCTKIDRMLEAFRHTKVDLS 257
MVTSVPFNETKKA+ DMDKAVEN DKTIQDLCTKIDRMLEAFR TK DL
Sbjct: 184 SSVPSITSAAMVTSVPFNETKKADADMDKAVENSDKTIQDLCTKIDRMLEAFRDTKEDLP 243
Query: 258 LSKDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGMGTTIECSMKCEN 311
LSKDSTRDVAALSANTDPTSI+LEVS EAGSTNHVDT KLGMGTTIECSMKCEN
Sbjct: 244 LSKDSTRDVAALSANTDPTSISLEVSAEAGSTNHVDTTKLGMGTTIECSMKCEN 297
>Os08g0322400 Nucleotide-binding, alpha-beta plait domain containing protein
Length = 899
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/422 (53%), Positives = 264/422 (62%), Gaps = 5/422 (1%)
Query: 19 RDNMVSEQSIRGVSGVEMKWESAGGQRNC--QQLG-GGVFGGDAHHLFDEMSTCPRGDSA 75
RDNMVSEQSI G+ EM+W + GG +C Q L GG G A +FDEM + +
Sbjct: 4 RDNMVSEQSIHGIPIQEMQWTTHGGSDDCWGQDLSHGGDSVGGARQVFDEMPSRLGSAAG 63
Query: 76 AVLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSAT 135
A L V V+ +IYPV++ V+HQV+N YGAVAVQ+L V W+V+A+V F ++ DAE A++
Sbjct: 64 AALHVQVNHLIYPVSTNVMHQVFNPYGAVAVQMLVVDAWRVEAIVWFRTTCDAEWAQAEL 123
Query: 136 HGRDIYDGGCLMDVQHVQMFPGDGATTTHTTCLTMVXXXXXXXXXXXXXXXXXERVFXXX 195
HGR+IYDGGC++DVQHV D A T C V E VF
Sbjct: 124 HGRNIYDGGCVLDVQHVPTLLEDRADIAPTKCSMQVPVCATTKSDTQSTPTTLEHVFPAT 183
Query: 196 XXXXXXXXXXXXMVTSVPFNETKKAETDMDKAVENLDKTIQDLCTKIDRMLEAFRHTKVD 255
TS E +AE MDK VEN K IQDLCT+IDR+LEAFR TKVD
Sbjct: 184 MSPSAASTKSAVTTTSASLTEAMEAEASMDKVVENAGKAIQDLCTRIDRILEAFRDTKVD 243
Query: 256 LSLSKDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGMGTTIECSMKCENQLAD 315
LS +KDSTRDVA LSANT PT+IALEVS EAG TNHVD+AKLGMGTTIECSMK +NQL D
Sbjct: 244 LSENKDSTRDVAVLSANTSPTTIALEVSAEAGPTNHVDSAKLGMGTTIECSMKGKNQLVD 303
Query: 316 DDGGKDMAKEEWMELMEVDTKFTTMYLCFRDPLLIINAIPPRNWSWCLSRDYFGVVGLSF 375
DD GKDMA +E EL+EVDTKFT++ LCFRDP L +NAIP R CLS D GV LS
Sbjct: 304 DD-GKDMANDERTELIEVDTKFTSVNLCFRDPWLALNAIPSRILIGCLSHD-LGVNSLSL 361
Query: 376 VSLKLEVLYGCFDRSSEYTASXXXXXXWRAAIPRNKAEMTSGSRPLPWLDPQLCQGSGGV 435
V LEV Y CF S S WR A+P ++ SGSRP PW DP L GSG V
Sbjct: 362 VPSTLEVPYHCFVLGSVCRVSSPPVPLWRVAVPLYSDQVYSGSRPSPWPDPWLHSGSGSV 421
Query: 436 VV 437
VV
Sbjct: 422 VV 423
>Os06g0157600
Length = 863
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/426 (53%), Positives = 268/426 (62%), Gaps = 9/426 (2%)
Query: 16 VLVRDNMVSEQSIRGVSGVEMKWESAGGQRNC--QQL--GGGVFGGDAHHLFDEMSTCPR 71
+L RDNMVSEQSI G+ EM+W + GG +C Q L GG G A +FDEM +
Sbjct: 4 MLDRDNMVSEQSIHGIPIREMQWTTHGGSDDCWGQDLSHGGDTVRG-ARQVFDEMPSRLG 62
Query: 72 GDSAAVLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERA 131
+ A L V V+ +IYPV++ V+HQV+N YGAVAVQ+LAV W+V+A+V F ++ DAE A
Sbjct: 63 SAAGAALHVQVNHLIYPVSTNVMHQVFNPYGAVAVQMLAVDAWRVEAIVWFRTTCDAEWA 122
Query: 132 RSATHGRDIYDGGCLMDVQHVQMFPGDGATTTHTTCLTMVXXXXXXXXXXXXXXXXXERV 191
+ HGR+IYDGGC++DVQHV D A T T CL V E V
Sbjct: 123 QDELHGRNIYDGGCVLDVQHVPTSLEDRADTAPTKCLMQVPGCATTKSDTESTPTTLEHV 182
Query: 192 FXXXXXXXXXXXXXXXMVTSVPFNETKKAETDMDKAVENLDKTIQDLCTKIDRMLEAFRH 251
F TSV E +AE MDK VEN K IQDLCT+IDR+LEAF
Sbjct: 183 FPATMSLSAAKSAVT--TTSVSLTEAMEAEASMDKVVENAGKAIQDLCTRIDRILEAFHD 240
Query: 252 TKVDLSLSKDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGMGTTIECSMKCEN 311
TKVDLS +KDSTRDVA LSANT PT+IALEVS EAG TNHVD AKLGMGTTIECSMK +N
Sbjct: 241 TKVDLSENKDSTRDVAELSANTSPTTIALEVSAEAGPTNHVDLAKLGMGTTIECSMKGKN 300
Query: 312 QLADDDGGKDMAKEEWMELMEVDTKFTTMYLCFRDPLLIINAIPPRNWSWCLSRDYFGVV 371
QL DDD GKDMA +E EL+EVDTKFT++ LCFRDP L +NAIP R CLS D GV
Sbjct: 301 QLVDDD-GKDMANDERTELIEVDTKFTSVNLCFRDPWLALNAIPSRILIGCLSHD-LGVN 358
Query: 372 GLSFVSLKLEVLYGCFDRSSEYTASXXXXXXWRAAIPRNKAEMTSGSRPLPWLDPQLCQG 431
LS V LEV Y CF S AS WR A+P ++ SGSRP PW DP L G
Sbjct: 359 NLSLVPSTLEVPYHCFVLGSVCRASSPPVPLWRVAVPWYSDQVFSGSRPSPWPDPWLYSG 418
Query: 432 SGGVVV 437
+G VVV
Sbjct: 419 NGSVVV 424
>Os02g0721400 Conserved hypothetical protein
Length = 440
Score = 374 bits (959), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/195 (92%), Positives = 185/195 (94%)
Query: 244 RMLEAFRHTKVDLSLSKDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGMGTTI 303
++L AFRHTKVDLSLSKDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGMGTTI
Sbjct: 72 QVLAAFRHTKVDLSLSKDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGMGTTI 131
Query: 304 ECSMKCENQLADDDGGKDMAKEEWMELMEVDTKFTTMYLCFRDPLLIINAIPPRNWSWCL 363
ECSMKCENQLADDDGGKDMAKEEWMELMEVDTKFTTMYLCFRDPLLIINAIPPRNWSWCL
Sbjct: 132 ECSMKCENQLADDDGGKDMAKEEWMELMEVDTKFTTMYLCFRDPLLIINAIPPRNWSWCL 191
Query: 364 SRDYFGVVGLSFVSLKLEVLYGCFDRSSEYTASXXXXXXWRAAIPRNKAEMTSGSRPLPW 423
SRDYFGVV LSFVSLKL+VLYGCFDRSSEYTAS WRAAIP NKAEMTSGSRPLPW
Sbjct: 192 SRDYFGVVCLSFVSLKLQVLYGCFDRSSEYTASPPPVPPWRAAIPWNKAEMTSGSRPLPW 251
Query: 424 LDPQLCQGSGGVVVK 438
DPQLCQGSGG+VV+
Sbjct: 252 PDPQLCQGSGGMVVQ 266
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/76 (92%), Positives = 73/76 (96%)
Query: 36 MKWESAGGQRNCQQLGGGVFGGDAHHLFDEMSTCPRGDSAAVLRVTVSQIIYPVTSEVLH 95
MKWESAGGQRNCQQLGGGVFGGDAHHLFDE+S+CPRGDSAAVL VTVSQIIYPVT EVLH
Sbjct: 1 MKWESAGGQRNCQQLGGGVFGGDAHHLFDEISSCPRGDSAAVLHVTVSQIIYPVTYEVLH 60
Query: 96 QVYNTYGAVAVQVLAV 111
QVY+TYGAVAVQVLA
Sbjct: 61 QVYDTYGAVAVQVLAA 76
>Os11g0664700 Conserved hypothetical protein
Length = 192
Score = 299 bits (766), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/191 (78%), Positives = 155/191 (81%)
Query: 251 HTKVDLSLSKDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGMGTTIECSMKCE 310
H + L +D +R V ++ +VSTEAGSTN VDTAKLGMGTTIECSMKCE
Sbjct: 1 HGQGGGELRQDHSRPVHQDRSDAREAFRDTKVSTEAGSTNLVDTAKLGMGTTIECSMKCE 60
Query: 311 NQLADDDGGKDMAKEEWMELMEVDTKFTTMYLCFRDPLLIINAIPPRNWSWCLSRDYFGV 370
NQLADDD GKDMAKEEWMELMEVDT FT MYLCFRDP LIINAIPPRNWSWCLSR YFGV
Sbjct: 61 NQLADDDDGKDMAKEEWMELMEVDTMFTAMYLCFRDPFLIINAIPPRNWSWCLSRAYFGV 120
Query: 371 VGLSFVSLKLEVLYGCFDRSSEYTASXXXXXXWRAAIPRNKAEMTSGSRPLPWLDPQLCQ 430
VGLSFVS KLEVLYGCFDRS EYTAS WRAAIP NKAEMTSGSRPLPW DPQLCQ
Sbjct: 121 VGLSFVSSKLEVLYGCFDRSLEYTASPPPVPPWRAAIPWNKAEMTSGSRPLPWPDPQLCQ 180
Query: 431 GSGGVVVKLLQ 441
GSGGVVVKLLQ
Sbjct: 181 GSGGVVVKLLQ 191
>Os02g0473100
Length = 709
Score = 292 bits (747), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 235/442 (53%), Gaps = 31/442 (7%)
Query: 20 DNMVSEQSIRGVSGVEMKWESAGGQRNCQQL----GGGVFGGDAHHLFDEMSTCPRGDSA 75
+NMVSE +IRG+ G E +W + GG + Q+L GGG GG A +F+EM + +
Sbjct: 6 NNMVSEPTIRGIPGQETRWMTHGGSSDVQRLDPSIGGGCTGG-ACQVFEEMPSWLGAGAG 64
Query: 76 AVLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSAT 135
LRV VS+++YPVT EVLHQVYN YGAVAVQVLA S W V+ALV F SS DAERARS T
Sbjct: 65 IALRVQVSRVLYPVTGEVLHQVYNDYGAVAVQVLATSCWGVEALVWFRSSCDAERARSDT 124
Query: 136 HGRDIYDGGCLMDVQHVQMFPGDGATTTHTTCLTMVXXXXXXXXXXXXXXXXXERVFXXX 195
+ R+IYDG CL+DVQH Q FPG+GA T C T+ E VF
Sbjct: 125 NERNIYDGCCLLDVQHTQSFPGNGANMMPTKCSTLGPSYATTTSGAKSIPAATECVFPAT 184
Query: 196 XXXXXXXXXXXXMVTSVPFNETKKAETDMDKAVENLDKTIQDLCTK----IDRMLEAFRH 251
M T P ETK +DK V ++T QDL TK ID+MLE R+
Sbjct: 185 KASLAPSTSSTTMATPAPSTETKVVGAGIDKEVLKSEETTQDLYTKMMAMIDKMLETCRN 244
Query: 252 TKVDLSLSKDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGMGTTIECS--MKC 309
TK D ++S S D ALS N D I EVS EA ST+ V+T KL M K
Sbjct: 245 TKEDYTVSVGSNGDATALSVNIDSVPILSEVSNEAKSTHLVNTNKLSMVKVKPTKGLTKS 304
Query: 310 ENQLADDDGGKDMAKEEWMELMEVDTKFTTMYLCFRDPLLIINAIPPRNWSWCLSRDYFG 369
+ + D D G M ++ +E +VDTK ++ F D L + C S +Y G
Sbjct: 305 KKEKVDGDAG-GMVTDDCVEFTKVDTKLIYVFRPFTDVSLAL----------CQS-NYIG 352
Query: 370 VVGLSFVSLKLEVLYGCFDRSSEYTASXXXXXXWRAAIPRNKAEMTSGSRPLPWLDPQLC 429
V L VS + EV Y F +++TA WR A+P + R LPW D
Sbjct: 353 VTNLPVVSSECEVRYDDFVSGADFTARPQVVPPWRLAVPLD-------FRFLPWPD-IFN 404
Query: 430 QGSGGVVVKLLQPWPPLIQTSV 451
QGSGGVVVKLLQPWPP Q V
Sbjct: 405 QGSGGVVVKLLQPWPPPAQAEV 426
>Os05g0254300
Length = 626
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 175/448 (39%), Positives = 220/448 (49%), Gaps = 46/448 (10%)
Query: 19 RDNMVSEQSIRGVSGVEMKWESAGGQRNCQQLG---GGVFGGDAHHLFDEMSTCPRGDSA 75
R+NMVSE S+ G+ E +W + G + Q L GG G A +FD M + +
Sbjct: 7 RNNMVSELSVHGIPCQETRWLTHGCSYDFQILNPSIGGSCTGGARQVFDAMPSWLGAGAG 66
Query: 76 AVLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSAT 135
A L V VS IIYPVT++VL+QVY+ YGA + +L V W+V+ LV F + DA++AR AT
Sbjct: 67 AALHVQVSHIIYPVTNKVLYQVYDIYGAEELHILVVDAWRVEVLVWFRARGDAKKARGAT 126
Query: 136 HGRDIYDGGCLMDVQHVQMFPGDGATTTHTTCLTMVXXXXXXXXXXXXXXXXXERVFXXX 195
HGR+IYDGGCL++ QH Q DGA T T C T V E VF
Sbjct: 127 HGRNIYDGGCLLEAQHAQPCSKDGAVPTPTKCSTPVPSCAITKSDAESTPTTLEHVFPAT 186
Query: 196 XXXXXXXXXXXXMVTSVPFNETKKAETDMDKAVENLDKTIQDLCTKIDRMLEAFRHTKVD 255
V TK+ E DMDK+ ++T Q+LC K+ ML T +
Sbjct: 187 MSQSMPSAASAAAAPPVSLTATKEDEADMDKSEIKPEETFQELCAKMIAMLNNMLVT-CE 245
Query: 256 LSLSKDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGMGTTIECSMKCENQLAD 315
+ S D TR VA S NT+ LEV EA S + VDT + M T +C K Q+ +
Sbjct: 246 STASVDITRVVAVTSTNTESVPNTLEVRKEANSISLVDTNESCMATPTKCLTKGNEQMIN 305
Query: 316 DDGGKDMAKEEWMELMEVDTKFTTMYLCFRDPLLIINAIPPRNWSWCLSRDYFGVVGLSF 375
DD DMA E+ +E EV++KFT F +P +FG +S
Sbjct: 306 DD-DDDMATEDLVEHTEVNSKFTLRQTSFNNP-------------------WFGHQAISV 345
Query: 376 VSLKLEVLYGCFDRSSEYTASXXXXXXWRAAIPRNKAEMTSGSRPLPWLDPQLCQGS--- 432
V L Y C DRSSEYTA WRA IP N+AEMT GSRPLP DPQL QGS
Sbjct: 346 VYL---TCYSCLDRSSEYTARSPLVPRWRAVIPWNQAEMTFGSRPLPRPDPQLSQGSEAR 402
Query: 433 GGVVVKLL----------------QPWP 444
GG V L QPWP
Sbjct: 403 GGEVSMELATSQANCKGDRVEHQPQPWP 430
>Os12g0206200
Length = 743
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 197/356 (55%), Gaps = 15/356 (4%)
Query: 8 LCERFGVIVLVRDNMVSEQSIRGVSGVEMKWESAGGQRNCQQL----GGGVFGGDAHHLF 63
+ E G+ ++ RDNMVSE +IRG+ G E +W + G + Q+L GGG GG +F
Sbjct: 33 IAEASGLPLMDRDNMVSEPTIRGIPGQEARWMTHSGSSDVQRLDPSIGGGCTGGSCQ-VF 91
Query: 64 DEMSTCPRGDSAAVLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFM 123
EM + + A L V VSQ++YPVTSEVLHQVYN YGAVAVQVLA S W V+ALV F
Sbjct: 92 GEMPSWLGAGAGAALHVQVSQVLYPVTSEVLHQVYNGYGAVAVQVLATSCWGVEALVWFR 151
Query: 124 SSHDAERARSATHGRDIYDGGCLMDVQHVQMFPGDGATTTHTTCLTMVXXXXXXXXXXXX 183
SS D ERARS T+ +IYDG CL+DVQH Q FPG+GA T C T+
Sbjct: 152 SSCDTERARSDTNEHNIYDGCCLLDVQHTQSFPGNGANVIPTKCSTLGPSYATTTSGAKS 211
Query: 184 XXXXXERVFXXXXXXXXXXXXXXXMVTSVPFNETKKAETDMDKAVENLDKTIQDLCTK-- 241
ERVF M P ETK MDKAV ++T QDL TK
Sbjct: 212 IPAATERVFLATKASLAPSTSSTTMTAPAPSTETKDVGAGMDKAVLKSEETTQDLYTKMM 271
Query: 242 --IDRMLEAFRHTKVDLSLSKDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGM 299
ID++LE R TK D ++S DS D AA N DP I LEVS EA ST V+T KL +
Sbjct: 272 AMIDKLLETCRDTKEDYTMSVDSNGDAAAQCINIDPVPILLEVSNEANSTQLVNTNKLCL 331
Query: 300 ---GTTIECSMKCENQLADDDGGKDMAKEEWMELMEVDTKFTTMYLCFRDPLLIIN 352
+T + + + ++ D GG M ++ + VDTK +++ FRD L IIN
Sbjct: 332 VKVKSTKDLKKRKKEKVDGDAGG--MVTDDCVAFTNVDTKLISVFRPFRD-LDIIN 384
>Os01g0695000
Length = 623
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/326 (45%), Positives = 179/326 (54%), Gaps = 12/326 (3%)
Query: 22 MVSEQSIRGVSGVEMKW--ESAGG---QRNCQQLGGGVFGGDAHHLFDEMSTCPRGDSAA 76
MVSEQSIRG+ E W S G +RN + GGV G A +F EM + + A
Sbjct: 1 MVSEQSIRGIPSKEACWATHSCNGDLWRRNLSR--GGVSAGGARQVFGEMPSWLGDGAGA 58
Query: 77 VLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 136
LRV VSQ++YPVTSEVLHQVYNTYGAVAVQVL S V+A V F SS DAERARS T+
Sbjct: 59 ALRVQVSQVLYPVTSEVLHQVYNTYGAVAVQVLTTSPLGVEAFVWFRSSCDAERARSVTN 118
Query: 137 GRDIYDGGCLMDVQHVQMFPGDGATTTHTTCLTMVXXXXXXXXXXXXXXXXXERVFXXXX 196
GR+IYDG CL+DVQHV F G+G T T C T V E VF
Sbjct: 119 GRNIYDGCCLLDVQHVHPFNGNGVNMTPTKCSTPVPSCANIKSDAKSTSTTLEHVFPATM 178
Query: 197 XXXXXXXXXXXMVTSVPFNETKKAETDMDKAVENLDKTIQDLCTKIDRMLEAF----RHT 252
+V + TK+ DM KA + +KT DLC +I M+ R
Sbjct: 179 SPSTPSDESAVVVPPISLTATKENWADMGKAEDKSEKTFHDLCVEIKDMINQILVTCRDI 238
Query: 253 KVDLSLSKDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGMGTTIECSMKCENQ 312
KV+ + S D TR VAA S NT LEVS EA S + VDT +L M T +C + Q
Sbjct: 239 KVESTTSVDITRVVAATSTNTKSVPNTLEVSNEANSISLVDTNELCMVTATKCLTEGNEQ 298
Query: 313 LADDDGGKDMAKEEWMELMEVDTKFT 338
+ +DD DMA E+ +EL EV++KFT
Sbjct: 299 MINDD-DDDMATEDLVELTEVNSKFT 323
>Os02g0318300
Length = 728
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 164/443 (37%), Positives = 205/443 (46%), Gaps = 68/443 (15%)
Query: 18 VRDNMVSEQSIRGVSGVEMKWESAGGQRNCQQLG---GGVFGGDAHHLFDEMSTCPRGDS 74
VR+N VSE +IRG+ + +W + G + Q+L GG F G A +F EM + +
Sbjct: 4 VRNNKVSEPTIRGIPYQKARWMTHSGSSDVQRLDPSIGGGFTGGACQVFGEMPSWLGAGA 63
Query: 75 AAVLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSA 134
AVLRV VSQ++YP+TSEVLHQVYN YGAVAVQVLA
Sbjct: 64 GAVLRVQVSQVLYPMTSEVLHQVYNGYGAVAVQVLA-----------------------T 100
Query: 135 THGRDIYDGGCLMDVQHVQMFPGDGATTTHTTCLTMVXXXXXXXXXXXXXXXXXERVFXX 194
TH FPG+GA T C T+ ERVF
Sbjct: 101 THAS----------------FPGNGANVMPTKCSTLGPSYATTTSGAKSIPAATERVFPA 144
Query: 195 XXXXXXXXXXXXXMVTSVPFNETKKAETDMDKAVENLDKTIQDLCTK----IDRMLEAFR 250
M T P ETK MDK V +KT QDL TK I++MLE R
Sbjct: 145 TKASLASSTSSTTMTTPAPSTETKDVGAGMDKEVLKSEKTTQDLNTKMMAMINKMLETCR 204
Query: 251 HTKVDLSLSKDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGMGTTIECS--MK 308
+TK D ++S D D ALS N DP I EVS EA ST+ V+T KL M T K
Sbjct: 205 NTKEDYTVSVDCNGDATALSVNIDPVPILSEVSNEANSTHLVNTNKLSMVTVKPTKGLTK 264
Query: 309 CENQLADDDGGKDMAKEEWMELMEVDTKFTTMYLCFRDPLLIINAIPPRNWSWCLSRDYF 368
+ + D D G M + ++ +VDTK ++ F D L + C S ++
Sbjct: 265 SKKEKVDGDVG-GMVTDNCVKFTKVDTKLIFVFRPFTDVCLTL----------CRS-NHI 312
Query: 369 GVVGLSFVSLKLEVLYGCFDRSSEYTASXXXXXXWRAAIPRNKAEMTSGSRPLPWLDPQL 428
V L VS + EV F +++TA WR A+P + R LPW D
Sbjct: 313 VVTNLPVVSSECEVCCDDFVSGADFTARPQVVPPWRLAVPLD-------FRFLPWPD-IF 364
Query: 429 CQGSGGVVVKLLQPWPPLIQTSV 451
QGSGGVVVKLLQPWPP IQ V
Sbjct: 365 NQGSGGVVVKLLQPWPPPIQAEV 387
>Os04g0181200
Length = 646
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 105/205 (51%), Gaps = 4/205 (1%)
Query: 74 SAAVLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARS 133
+ A L V VS IIYPVT+EVLHQVY+ YGA + +L W+V+ALV F + AE+AR
Sbjct: 19 AGAALHVQVSHIIYPVTNEVLHQVYDIYGAEELHILVADAWRVEALVWFRARGGAEKARG 78
Query: 134 ATHGRDIYDGGCLMDVQHVQMFPGDGATTTHTTCLTMVXXXXXXXXXXXXXXXXXERVFX 193
ATHG IYDGGCL++ QHVQ DGA T T C +V E VF
Sbjct: 79 ATHGHHIYDGGCLLEAQHVQPCSKDGAVLTPTKCSMLVPSCAITKSDAESTPTTLEHVFP 138
Query: 194 XXXXXXXXXXXXXXMVTSVPFNETKKAETDMDKAVENLDKTIQDLCTKIDRMLEAFRHT- 252
V TK+ E DMDK+ ++T Q+LC K+ ML T
Sbjct: 139 ATMSQSMPSAALAAAAPPVSLTATKEDEADMDKSEMKPEETFQELCAKMIAMLNNMLVTC 198
Query: 253 ---KVDLSLSKDSTRDVAALSANTD 274
KV+ + S D TR VA S NT+
Sbjct: 199 CDIKVESTASVDITRVVAVTSTNTE 223
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 38/52 (73%)
Query: 384 YGCFDRSSEYTASXXXXXXWRAAIPRNKAEMTSGSRPLPWLDPQLCQGSGGV 435
+ C DRSSEYTAS WRA IP N+AEMT GSRPLPW DPQL QGS GV
Sbjct: 229 WSCLDRSSEYTASSPPVPPWRAVIPWNQAEMTFGSRPLPWPDPQLSQGSEGV 280
>Os07g0187100
Length = 293
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 140/324 (43%), Gaps = 58/324 (17%)
Query: 133 SATHGRDIYDGGCLMDVQHVQMFPGDGATTTHTTCLTMVXXXXXXXXXXXXXXXXXERVF 192
S T+GR+IYDG L+DVQHV F G+G T T CLT+ E VF
Sbjct: 4 SVTNGRNIYDGCYLLDVQHVHPFNGNGVDMTPTKCLTLGPSSITTRPAVESSLAAPEHVF 63
Query: 193 XXXXXXXXXXXXXXXMVTSVPFNETKKAETDMDKAVENLDKTIQDLCTKI----DRMLEA 248
+ T P +T KAE DM + T Q+LC KI + ML
Sbjct: 64 PATMNSSTPSTTAAAIATPSPSIKTNKAEGDMAQVEMKPKDTFQELCAKIIATLNNMLVT 123
Query: 249 FRHTKVDLSLSKDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGMGTTIECSMK 308
R+ K++ S TR V A S NT LEVS EA S + VDT + M TT +C K
Sbjct: 124 CRNIKLESITSVGITRVVTAKSTNTKSVPNTLEVSDEANSISLVDTNEFYMVTTTKCLTK 183
Query: 309 CENQLADDDGGKDMAKEEWMELMEVDTKFTTMYLCFRDPLLIINAIPPRNWSWCLSRDYF 368
Q+ +DD DMA E+ +EL +V++KFT LL + PP
Sbjct: 184 GNEQMINDD-DDDMATEDLVELTKVNSKFT---------LLQTGSSPP------------ 221
Query: 369 GVVGLSFVSLKLEVLYGCFDRSSEYTASXXXXXXWRAAIPRNKAEMTSGSRPLPWLDPQL 428
WRAAIP KAEMT G RPLPW DP L
Sbjct: 222 -------------------------------VSPWRAAIPWYKAEMTLGYRPLPWHDPWL 250
Query: 429 CQGSGGVVV-KLLQPWPPLIQTSV 451
Q SG VV+ KLL P P Q V
Sbjct: 251 SQDSGSVVMTKLLHPQQPPSQAEV 274
>Os09g0133400
Length = 252
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 117/257 (45%), Gaps = 27/257 (10%)
Query: 144 GCLMDVQHVQMFPGDGATTTHTTCLTMVXXXXXXXXXXXXXXXXXERVFXXXXXXXXXXX 203
GCL+DVQHVQ F G G T T CLT+ + VF
Sbjct: 9 GCLLDVQHVQPFNGKGVDMTPTKCLTLGPGSTTTRPAVENSLAAPKHVFPATMNSFTPST 68
Query: 204 XXXXMVTSVPFNETKKAETDMDKAVENLDKTIQDLCTKIDRMLEAF----RHTKVDLSLS 259
+ T P +T KAE DM + D+T Q+LC K+ ML + R KV+ + S
Sbjct: 69 TASAIATPSPSIKTNKAEGDMVQVEMKPDETFQELCAKMIAMLNSMLVTCRDIKVESTAS 128
Query: 260 KDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGMGTTIECSMKCENQLADDDGG 319
TR VAA S NT LEVS + S + VDT L M T +C K Q+ ++D
Sbjct: 129 VGITRVVAATSTNTKSIPNTLEVSDDDNSISLVDTNGLCMVTATKCLTKGNEQMINND-D 187
Query: 320 KDMAKEEWMELMEVDTKFTTMYLCFRDPLLIINAIPPRNWSWCLSRDYFGVVGLSFVSLK 379
DMA E+ ++L EV++KFT + F +P +FG + V L
Sbjct: 188 DDMATEDLVKLTEVNSKFTVLQTSFNNP-------------------WFGHQAIFVVHL- 227
Query: 380 LEVLYGCFDRSSEYTAS 396
YGC DRSS+YTAS
Sbjct: 228 --TCYGCLDRSSKYTAS 242
>Os08g0409000
Length = 401
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 72/119 (60%)
Query: 52 GGVFGGDAHHLFDEMSTCPRGDSAAVLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAV 111
G D+ +FDEM + +A+VL VT+S ++YPVT+EVL QV++ YGA V+V
Sbjct: 59 GATSSVDSQKVFDEMPSNKEPTTASVLHVTMSHVLYPVTAEVLLQVFSPYGAEEVRVYNQ 118
Query: 112 STWQVKALVSFMSSHDAERARSATHGRDIYDGGCLMDVQHVQMFPGDGATTTHTTCLTM 170
T QV+A + F DA RAR A HG IY+G C +DV+++Q P D + CL++
Sbjct: 119 GTIQVEAFILFRLCQDATRAREALHGCCIYNGCCFLDVKYMQSCPNDIMSVAPVRCLSI 177
>Os04g0107750
Length = 476
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 72/144 (50%), Gaps = 20/144 (13%)
Query: 308 KCENQLADDDGGKDMAKEEWMELMEVDTKFTTMYLCFRDPLLIINAIPPRNWSWCLSRDY 367
K + + D D G DM ++ +E +V+TK +++ F D L + C S +Y
Sbjct: 12 KSKKEKVDGDAG-DMITDDCVEFTKVNTKLISVFRPFTDVSLTL----------CRS-NY 59
Query: 368 FGVVGLSFVSLKLEVLYGCFDRSSEYTASXXXXXXWRAAIPRNKAEMTSGSRPLPWLDPQ 427
GV L VS + E Y F +++TA WR A+P + R LPW D
Sbjct: 60 IGVTNLPIVSSECEAYYDDFVSGADFTARPQVVPPWRLAVPLD-------FRFLPWPD-I 111
Query: 428 LCQGSGGVVVKLLQPWPPLIQTSV 451
QGSGG+VVKLLQPWPP IQ V
Sbjct: 112 FNQGSGGMVVKLLQPWPPPIQAEV 135
>Os04g0255100
Length = 201
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 72 GDSAAVLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERA 131
D+ VL VT S ++YPVT ++LH+V+ YGA + + + T +V+A V F S DAE A
Sbjct: 17 SDAEQVLHVTASNLLYPVTKDLLHRVFYAYGAKKICLYQMET-RVEASVQFQSREDAEYA 75
Query: 132 RSATHGRDIYDGGCLMDVQHVQMFPGDGATTT 163
R HG +IY G C MD Q + P AT +
Sbjct: 76 RKTFHGHNIYHGCCQMDFQ--RELPSPVATNS 105
>Os05g0437300 HnRNP-L/PTB/hephaestus splicing factor family protein
Length = 444
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 77 VLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 136
+L VT+ ++YP+T EVLHQV+ YG V V + +AL+ + S +A A A H
Sbjct: 103 ILLVTIHHMMYPITVEVLHQVFKAYGYVEKIVTFQKSAGFQALIQYQSLQEAMDAFGALH 162
Query: 137 GRDIYDGGCLMDVQHVQM 154
GR+IYDG C +D+Q+ +
Sbjct: 163 GRNIYDGCCQLDIQYSNL 180
>Os01g0867800 HnRNP-L/PTB/hephaestus splicing factor family protein
Length = 439
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 77 VLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 136
+L VT+ ++YP+T EVLHQV++ YG V V + + L+ + S A +A A H
Sbjct: 98 ILLVTIHHMLYPITIEVLHQVFSPYGFVEKIVTFQKSAGFQTLIQYQSRQSAIQAYGALH 157
Query: 137 GRDIYDGGCLMDVQHVQM 154
GR+IYDG C +D+Q+ +
Sbjct: 158 GRNIYDGCCQLDIQYSNL 175
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.133 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,597,822
Number of extensions: 578698
Number of successful extensions: 1578
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 1534
Number of HSP's successfully gapped: 22
Length of query: 451
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 347
Effective length of database: 11,605,545
Effective search space: 4027124115
Effective search space used: 4027124115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)