Os11g0664700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0664700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.64 | 0.469 | 7.97 | 0.0523 | 0.574 | 0.76 | -0.823 | 1.21 | -0.0713 | 6.06 | 24.27 | 1338 | -- | -- |
| 100.12 | 0.466 | 7.99 | -0.27 | 0.682 | 0.92 | -0.784 | -- | -0.0495 | 5.82 | 26.9 | 1700 | -- | -- |
| 101.12 | 0.468 | 7.97 | 0.0433 | 0.568 | 0.795 | -- | 1.25 | -0.0788 | 6.48 | 23.98 | 1266 | -- | -- |
| 101.33 | 0.469 | 7.98 | -0.252 | 0.699 | 0.95 | -- | -- | -0.0248 | 5.91 | 27.16 | 1746 | -- | -- |
| 118.03 | 0.506 | 7.97 | 0.0963 | -- | 0.799 | -- | 1.39 | -0.066 | -- | 23.89 | 1313 | -- | -- |
| 128.82 | 0.532 | 7.98 | 0.00804 | 0.645 | -- | -0.71 | -- | -0.027 | 5.62 | -- | -- | -- | -- |
| 130.06 | 0.534 | 7.98 | 0.00482 | 0.641 | -- | -- | -- | -0.0239 | 5.65 | -- | -- | -- | -- |
| 118.63 | 0.507 | 8.03 | -0.298 | -- | 0.936 | -- | -- | -0.169 | -- | 24.13 | 1307 | -- | -- |
| 102.86 | 0.472 | 7.97 | -- | 0.708 | 0.909 | -- | -- | 0.0246 | 5.87 | 27.5 | 1762 | -- | -- |
| 151.38 | 0.575 | 7.99 | 0.0253 | -- | -- | -- | -- | -0.00855 | -- | -- | -- | -- | -- |
| 130.06 | 0.533 | 7.98 | -- | 0.641 | -- | -- | -- | -0.0244 | 5.65 | -- | -- | -- | -- |
| 120.75 | 0.512 | 8.02 | -- | -- | 0.882 | -- | -- | -0.133 | -- | 24.4 | 1309 | -- | -- |
| 151.4 | 0.574 | 7.99 | -- | -- | -- | -- | -- | -0.0114 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.04 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 17 |
| 18 | 96.43 | temperature | 15 | 10 | > th | dose dependent | rect. | 2 | 18 |
| 19 | 96.53 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 9 |
| 44 | 97.62 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 117 | 99.09 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 16 |
| 182 | 99.38 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 222 | 99.55 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 19 |
| 284 | 99.72 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 21 |
| 307 | 99.76 | temperature | 30 | 270 | < th | dose independent | rect. | 5 | 20 |
| 355 | 99.83 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 413 | 99.95 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 19 |
| 553 | 100.65 | temperature | 30 | 270 | < th | dose independent | rect. | 6 | 18 |
| 636 | 100.94 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 7 |
| 779 | 101.12 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 780 | 101.13 | temperature | 10 | 1440 | > th | dose dependent | sin | 22 | NA |
| 856 | 101.19 | temperature | 25 | 270 | > th | dose independent | rect. | 11 | 7 |