BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0768600 Os02g0768600|AK060304
(294 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0768600 Similar to Chloroplast inorganic pyrophosphata... 524 e-149
Os02g0704900 Similar to Inorganic pyrophosphatase-like protein 80 2e-15
Os04g0687100 Similar to Soluble inorganic pyrophosphatase (... 79 3e-15
Os05g0114000 Similar to PRLI-interacting factor F (Fragment) 78 7e-15
Os05g0438500 Similar to Soluble inorganic pyrophosphatase (... 77 1e-14
Os01g0866500 Similar to Soluble inorganic pyrophosphatase (... 76 3e-14
Os10g0406100 Similar to PRLI-interacting factor F (Fragment) 75 5e-14
>Os02g0768600 Similar to Chloroplast inorganic pyrophosphatase (EC 3.6.1.1)
Length = 294
Score = 524 bits (1349), Expect = e-149, Method: Compositional matrix adjust.
Identities = 262/294 (89%), Positives = 262/294 (89%)
Query: 1 LPREPQVPIASSSGETXXXXXXXXXXXXXXXXXXXDDPTAVRFQXXXXXXXXXXXXXELR 60
LPREPQVPIASSSGET DDPTAVRFQ ELR
Sbjct: 1 LPREPQVPIASSSGETSSHFPVSRRRRRCSLRTNSDDPTAVRFQRRVLATTALLRTAELR 60
Query: 61 PKEQGLPETLDYRVFLVDGGGRKVSPWHDVPLRAGDGVFHFVVEIPKESSAKMEVATDES 120
PKEQGLPETLDYRVFLVDGGGRKVSPWHDVPLRAGDGVFHFVVEIPKESSAKMEVATDES
Sbjct: 61 PKEQGLPETLDYRVFLVDGGGRKVSPWHDVPLRAGDGVFHFVVEIPKESSAKMEVATDES 120
Query: 121 FTPIKQDTKKGNLRYYPYNINWNYGLFPQTWEDPTLANTDVEGAFGDNDPVDVVEIGERR 180
FTPIKQDTKKGNLRYYPYNINWNYGLFPQTWEDPTLANTDVEGAFGDNDPVDVVEIGERR
Sbjct: 121 FTPIKQDTKKGNLRYYPYNINWNYGLFPQTWEDPTLANTDVEGAFGDNDPVDVVEIGERR 180
Query: 181 ANIGDVLKVKPLAALAMIDEGELDWKIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDW 240
ANIGDVLKVKPLAALAMIDEGELDWKIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDW
Sbjct: 181 ANIGDVLKVKPLAALAMIDEGELDWKIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDW 240
Query: 241 FRDYKIPDGKPANRFGLGNKPTSKEYALKVIEETNESWEKLVKRNIPAGELSLA 294
FRDYKIPDGKPANRFGLGNKPTSKEYALKVIEETNESWEKLVKRNIPAGELSLA
Sbjct: 241 FRDYKIPDGKPANRFGLGNKPTSKEYALKVIEETNESWEKLVKRNIPAGELSLA 294
>Os02g0704900 Similar to Inorganic pyrophosphatase-like protein
Length = 214
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 23/161 (14%)
Query: 86 PWHDVPLRAGD-GVFHFVVEIPKESSAKMEVATDESFTPIKQDTKKGNLRYYPYNINWNY 144
PWHD+ + G VF+ VVEIP+ S K E+ D++ IK D + YP+N Y
Sbjct: 37 PWHDLEIGPGAPAVFNCVVEIPRGSKVKYEL--DKATGLIKVDRVLYSSVVYPHN----Y 90
Query: 145 GLFPQTWEDPTLANTDVEGAFGDNDPVDVVEIGERRANIGDVLKVKPLAALAMIDEGELD 204
G P+T + D DP+DV+ + + + G L+ + + + MID+GE D
Sbjct: 91 GFIPRTLCE-------------DGDPMDVLVLMQEQVVPGCFLRARAIGLMPMIDQGEKD 137
Query: 205 WKIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDWFRDYK 245
KI+A+ DDP+ D+ ++ H L IR +F DYK
Sbjct: 138 DKIIAVCADDPEYRHFRDIKEIPPH---RLQEIRRFFEDYK 175
>Os04g0687100 Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1)
(Pyrophosphate phospho- hydrolase) (PPase)
Length = 213
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 23/166 (13%)
Query: 86 PWHDVPLRAGD-GVFHFVVEIPKESSAKMEVATDESFTPIKQDTKKGNLRYYPYNINWNY 144
PWHD+ + G VF+ VVEI K S K E+ D+ IK D + YP+N Y
Sbjct: 36 PWHDLEIGPGAPAVFNVVVEITKGSKVKYEL--DKKTGLIKVDRVLYSSVVYPHN----Y 89
Query: 145 GLFPQTWEDPTLANTDVEGAFGDNDPVDVVEIGERRANIGDVLKVKPLAALAMIDEGELD 204
G P+T + DNDP+DV+ + + G L+ + + + MID+GE D
Sbjct: 90 GFIPRTLCE-------------DNDPMDVLVLMQEPVIPGSFLRARAIGLMPMIDQGEKD 136
Query: 205 WKIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGK 250
KI+A+ DDP+ ND+ ++ H L I+ +F DYK + K
Sbjct: 137 DKIIAVCADDPEYRHYNDISELSPH---RLQEIKRFFEDYKKNENK 179
>Os05g0114000 Similar to PRLI-interacting factor F (Fragment)
Length = 216
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 23/161 (14%)
Query: 86 PWHDVPLRAGD-GVFHFVVEIPKESSAKMEVATDESFTPIKQDTKKGNLRYYPYNINWNY 144
PWHD+ + G +F+ V+EIP+ S K E+ D+ I D + YP+N Y
Sbjct: 39 PWHDLEIGPGAPTIFNCVIEIPRGSKVKYEL--DKKTGLIVVDRVLYSSVVYPHN----Y 92
Query: 145 GLFPQTWEDPTLANTDVEGAFGDNDPVDVVEIGERRANIGDVLKVKPLAALAMIDEGELD 204
G P+T + D+DP+DV+ I + G L+ K + + MID+GE D
Sbjct: 93 GFIPRTLCE-------------DSDPLDVLVIMQEPVIPGCFLRAKAIGLMPMIDQGEAD 139
Query: 205 WKIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDWFRDYK 245
KI+A+ DDP+ ND+ ++ H L IR +F DYK
Sbjct: 140 DKIIAVCADDPEYKHYNDIKELPPH---RLAEIRRFFEDYK 177
>Os05g0438500 Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1)
(Pyrophosphate phospho- hydrolase) (PPase)
Length = 224
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 23/181 (12%)
Query: 86 PWHDVPLRA-GDGVFHFVVEIPKESSAKMEVATDESFTPIKQDTKKGNLRYYPYNINWNY 144
PWHD+ + VF+ VVEI K S K E+ D+ IK D + YP+N Y
Sbjct: 47 PWHDLEIGPDAPAVFNVVVEITKGSKVKYEL--DKKTGLIKVDRILYSSVVYPHN----Y 100
Query: 145 GLFPQTWEDPTLANTDVEGAFGDNDPVDVVEIGERRANIGDVLKVKPLAALAMIDEGELD 204
G P+T + DNDP+DV+ + + G L+ + + + MID+GE D
Sbjct: 101 GFIPRTLCE-------------DNDPMDVLVLMQEPVLPGSFLRARAIGLMPMIDQGEKD 147
Query: 205 WKIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANRFGLGNKPTSK 264
KI+A+ DDP+ N++ ++ H L IR +F DYK + K PT++
Sbjct: 148 DKIIAVCADDPEYRHFNNLSELSPH---RLQEIRRFFEDYKKNENKEVAVNDFLPAPTAR 204
Query: 265 E 265
E
Sbjct: 205 E 205
>Os01g0866500 Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1)
(Pyrophosphate phospho- hydrolase) (PPase)
Length = 212
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 86 PWHDVPLRA-GDGVFHFVVEIPKESSAKMEVATDESFTPIKQDTKKGNLRYYPYNINWNY 144
PWHD+ A VF+ VVEI K S K E+ F I D + YP+N Y
Sbjct: 36 PWHDLDTGADAPAVFNVVVEISKGSKVKYELDKKTGF--IMVDRVLYSSVVYPHN----Y 89
Query: 145 GLFPQTWEDPTLANTDVEGAFGDNDPVDVVEIGERRANIGDVLKVKPLAALAMIDEGELD 204
G P+T + DNDP+DV+ + + G L+ + + + MID+GE D
Sbjct: 90 GFIPRTLCE-------------DNDPMDVLVLMQEPVIPGCFLRARAIGLMPMIDQGEKD 136
Query: 205 WKIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGK 250
KI+A+ +DDP+ ND+ ++ H + IR +F DYK + K
Sbjct: 137 DKIIAVCVDDPEYRHYNDLSELSPH---RVQEIRRFFEDYKKNENK 179
>Os10g0406100 Similar to PRLI-interacting factor F (Fragment)
Length = 204
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 82/165 (49%), Gaps = 23/165 (13%)
Query: 87 WHDVPLRAGD-GVFHFVVEIPKESSAKMEVATDESFTPIKQDTKKGNLRYYPYNINWNYG 145
WHD+ + G VF+ VVEI K S K E+ D+ IK D + YP+N YG
Sbjct: 28 WHDLEIGPGAPQVFNVVVEITKGSKVKYEL--DKKTGMIKVDRVLYSSVVYPHN----YG 81
Query: 146 LFPQTWEDPTLANTDVEGAFGDNDPVDVVEIGERRANIGDVLKVKPLAALAMIDEGELDW 205
P+T + D DP+DV+ + + G L+ K + + MID+GE D
Sbjct: 82 FIPRTLCE-------------DGDPMDVLVLMQEPVIPGCYLRAKAIGLMPMIDQGEKDD 128
Query: 206 KIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGK 250
KI+A+ +DDP+ ND+ ++ P L IR +F DYK + K
Sbjct: 129 KIIAVCVDDPEFRHFNDLKELS---PHRLAEIRRFFEDYKKNENK 170
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.136 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,170,407
Number of extensions: 441662
Number of successful extensions: 596
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 589
Number of HSP's successfully gapped: 7
Length of query: 294
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 194
Effective length of database: 11,814,401
Effective search space: 2291993794
Effective search space used: 2291993794
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 155 (64.3 bits)