BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0705000 Os02g0705000|AK068080
(306 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0705000 NmrA-like family protein 632 0.0
Os06g0472200 Similar to Isoflavone reductase homolog Bet v ... 261 3e-70
Os01g0106300 Similar to Isoflavone reductase homolog IRL (E... 235 3e-62
Os12g0265100 Similar to Pinoresinol-lariciresinol reductase... 227 7e-60
Os01g0106400 Similar to Isoflavone reductase homolog IRL (E... 218 5e-57
Os03g0259400 Similar to Leucoanthocyanidin reductase (EC 1.... 190 1e-48
Os06g0479400 Similar to Phenylcoumaran benzylic ether reduc... 144 9e-35
Os12g0263200 NmrA-like family protein 141 6e-34
Os01g0237333 95 6e-20
Os01g0237366 NmrA-like family protein 85 8e-17
Os01g0237500 NmrA-like family protein 77 2e-14
>Os02g0705000 NmrA-like family protein
Length = 306
Score = 632 bits (1629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/306 (100%), Positives = 306/306 (100%)
Query: 1 MCEEATRSRVLVVGATGRLGGCLVRASLAAGHPTFALVRPHHLAVPDSAPLTSLAGATVV 60
MCEEATRSRVLVVGATGRLGGCLVRASLAAGHPTFALVRPHHLAVPDSAPLTSLAGATVV
Sbjct: 1 MCEEATRSRVLVVGATGRLGGCLVRASLAAGHPTFALVRPHHLAVPDSAPLTSLAGATVV 60
Query: 61 KGSLEDYPSLLEAVRQVDVVICAVPTKQALEQKLLIRAIKDAGCVKRFIPAEYGLDPTKV 120
KGSLEDYPSLLEAVRQVDVVICAVPTKQALEQKLLIRAIKDAGCVKRFIPAEYGLDPTKV
Sbjct: 61 KGSLEDYPSLLEAVRQVDVVICAVPTKQALEQKLLIRAIKDAGCVKRFIPAEYGLDPTKV 120
Query: 121 QICGMDHGFYEKKIEIRHLIESECIPHTYICCNFLMRYLLPSLVQPGLDAPPRDEVKIFG 180
QICGMDHGFYEKKIEIRHLIESECIPHTYICCNFLMRYLLPSLVQPGLDAPPRDEVKIFG
Sbjct: 121 QICGMDHGFYEKKIEIRHLIESECIPHTYICCNFLMRYLLPSLVQPGLDAPPRDEVKIFG 180
Query: 181 DGNTRGVFVEETDVAKFTICTIDDPRTLNNTLYLRPSGNVYSMNKLVDLWEKKINKFLNK 240
DGNTRGVFVEETDVAKFTICTIDDPRTLNNTLYLRPSGNVYSMNKLVDLWEKKINKFLNK
Sbjct: 181 DGNTRGVFVEETDVAKFTICTIDDPRTLNNTLYLRPSGNVYSMNKLVDLWEKKINKFLNK 240
Query: 241 IYITEEQLLKNIEDAPLPLKMDLIFIYSTFIKGDQTYFEIDSRKEGTQLYPHVNYTTVDG 300
IYITEEQLLKNIEDAPLPLKMDLIFIYSTFIKGDQTYFEIDSRKEGTQLYPHVNYTTVDG
Sbjct: 241 IYITEEQLLKNIEDAPLPLKMDLIFIYSTFIKGDQTYFEIDSRKEGTQLYPHVNYTTVDG 300
Query: 301 YLDKLV 306
YLDKLV
Sbjct: 301 YLDKLV 306
>Os06g0472200 Similar to Isoflavone reductase homolog Bet v 6.0101 (Fragment)
Length = 312
Score = 261 bits (668), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/304 (47%), Positives = 187/304 (61%), Gaps = 5/304 (1%)
Query: 8 SRVLVVGATGRLGGCLVRASLAAGHPTFALVRPHHLAVPDSAPLTSL---AGATVVKGSL 64
SRVLV+G TG +G +V AS H T LVR A P A + +GAT+VKG L
Sbjct: 9 SRVLVIGGTGYIGRYIVAASAREDHLTSVLVRDPAPADPAKAAVLQGFRDSGATLVKGDL 68
Query: 65 EDYPSLLEAVRQVDVVICAVPTKQALEQKLLIRAIKDAGCVKRFIPAEYGLDPTKVQICG 124
+ SL+ A++ DVVI AV Q +Q +I AIK+AG VKRF P+EYG D V
Sbjct: 69 YGHQSLVAAIKSADVVISAVGYAQLADQTRIISAIKEAGNVKRFFPSEYGNDVDHVHAVE 128
Query: 125 MDHGFYEKKIEIRHLIESECIPHTYICCNFLMRYLLPSLVQPGLDAPPRDEVKIFGDGNT 184
Y K IR +IE+E IP+TY+ NF LPSL Q + P D+V I GDGN
Sbjct: 129 PVKSVYATKARIRRVIEAEGIPYTYVSSNFFAGRFLPSLAQAWIKGLPTDKVIILGDGNV 188
Query: 185 RGVFVEETDVAKFTICTIDDPRTLNNTLYLRPSGNVYSMNKLVDLWEKKINKFLNKIYIT 244
+GVF E DV +TI +DDPRTLN LYLRPS N+ S N+LV LWEKK+ K +++YI
Sbjct: 189 KGVFATEEDVGTYTIKAVDDPRTLNKILYLRPSSNILSHNELVSLWEKKVGKTFDRVYIP 248
Query: 245 EEQLLKNIEDAPLPLKMDLIFIYSTFIKGDQTYFEIDSR--KEGTQLYPHVNYTTVDGYL 302
E+++LK I+++P PL + L +S ++KGD T FEI+ E T+LYP V YTTVD YL
Sbjct: 249 EDEVLKKIQESPAPLNVVLSINHSVWVKGDHTNFEIEPSFGVEATELYPDVKYTTVDEYL 308
Query: 303 DKLV 306
++ +
Sbjct: 309 NRFL 312
>Os01g0106300 Similar to Isoflavone reductase homolog IRL (EC 1.3.1.-)
Length = 318
Score = 235 bits (599), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/312 (41%), Positives = 185/312 (59%), Gaps = 8/312 (2%)
Query: 3 EEATRSRVLVVGATGRLGGCLVRASLAAGHPTFALVRPHHLAVPDSAPLTSL---AGATV 59
+ T+SR+LVVG TG +G +V AS GHPT ALVR + P A L AG T+
Sbjct: 7 QTTTKSRILVVGGTGYIGRHVVAASARLGHPTTALVRDLAPSDPAKAQLLHTFRDAGVTL 66
Query: 60 VKGSLEDYPSLLEAVRQVDVVICAVPTKQALEQKLLIRAIKDAGC--VKRFIPAEYGLDP 117
+ G L D+ SLL AVR DVVI AV Q +Q LI AIK+AG V+RFIP+E+G+DP
Sbjct: 67 LHGDLHDHASLLRAVRDADVVISAVRATQVPDQTRLIDAIKEAGGGRVRRFIPSEFGMDP 126
Query: 118 TKVQICGMD--HGFYEKKIEIRHLIESECIPHTYICCNFLMRYLLPSLVQPGLDAPPRDE 175
+ ++ Y K+ IR +E+ IPHTY+ CN+ + LPS+ Q A P D
Sbjct: 127 GRGASAAVEPVRSMYGSKVGIRRAVEAAGIPHTYVACNYFAGFALPSIGQFMPKAAPVDS 186
Query: 176 VKIFGDGNTRGVFVEETDVAKFTICTIDDPRTLNNTLYLRPSGNVYSMNKLVDLWEKKIN 235
V I G+G+T+ VFVEE D+ +T+ DPR N TL++RP N S ++LV +WEKK
Sbjct: 187 VVILGEGHTKVVFVEEGDIGTYTVLAAVDPRAENKTLHIRPPANTMSHDELVSMWEKKTG 246
Query: 236 KFLNKIYITEEQLLKNIEDAPLPLKMDLIFIYSTFIKGDQTYFEIDSRK-EGTQLYPHVN 294
K L ++Y+ E+ +L I++ P + + ++ + +G+ + D + E TQLYP +
Sbjct: 247 KKLERVYVPEDAVLTKIKELEYPKNVLVSIAHAAYCRGEMSSPLDDPQDVEATQLYPEIQ 306
Query: 295 YTTVDGYLDKLV 306
YTTVD YL+ L+
Sbjct: 307 YTTVDEYLNTLL 318
>Os12g0265100 Similar to Pinoresinol-lariciresinol reductase TH2
Length = 314
Score = 227 bits (579), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 187/311 (60%), Gaps = 12/311 (3%)
Query: 7 RSRVLVVGATGRLGGCLVRASLAAGHPTFALVRPH-HLAVPDSAPLTSLA--GATVVKGS 63
+SRVLVVG TG +G +V ASLAAGHPT+ L+RP L + L + GA +++ S
Sbjct: 5 KSRVLVVGGTGFVGRRVVAASLAAGHPTYVLLRPEIGLDIDKLQMLLAFKARGARLLEAS 64
Query: 64 LEDYPSLLEAVRQVDVVICAVP-----TKQALEQKLLIRAIKDAGCVKRFIPAEYGLDPT 118
L+D+ L+ AVRQ DVV+ A+ + + Q L+ AIKDAG VKRF+P+E+G+DP+
Sbjct: 65 LDDHDGLVAAVRQADVVVSAMSGVHFRSHNLMLQLKLVEAIKDAGNVKRFLPSEFGMDPS 124
Query: 119 KVQICGMDHG--FYEKKIEIRHLIESECIPHTYICCNFLMRYLLPSLVQPGLDAPPRDEV 176
++ ++ G +++K+ IR IE IPHTY+ N Y P+L Q PP++ V
Sbjct: 125 RMGDA-LEPGRVSFDEKMVIRRAIEDANIPHTYVSANCFAAYFCPNLCQMKTLLPPKERV 183
Query: 177 KIFGDGNTRGVFVEETDVAKFTICTIDDPRTLNNTLYLRPSGNVYSMNKLVDLWEKKINK 236
++GDGN + FV+E DV + I +IDDPRTLN T+Y+RP N + N+L+ WE K
Sbjct: 184 GVYGDGNVKVFFVDENDVGTYAIKSIDDPRTLNKTIYIRPQDNCLTQNELISKWETLTGK 243
Query: 237 FLNKIYITEEQLLKNIEDAPLPLKMDLIFIYSTFIKGDQTYFEI-DSRKEGTQLYPHVNY 295
L K +I ++ L +++D ++ + Y F +G FEI D+ E TQLYP V Y
Sbjct: 244 SLEKFHIPGDEFLASMKDLDFASQVGIGHYYHIFYEGCLANFEIGDNGAEATQLYPEVQY 303
Query: 296 TTVDGYLDKLV 306
T +D YL + +
Sbjct: 304 TRMDEYLKRYI 314
>Os01g0106400 Similar to Isoflavone reductase homolog IRL (EC 1.3.1.-)
Length = 314
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 126/309 (40%), Positives = 181/309 (58%), Gaps = 6/309 (1%)
Query: 4 EATRSRVLVVGATGRLGGCLVRASLAAGHPTFALVRPHHLAVPDSAPLTSL---AGATVV 60
E +SR+LVVG TG +G +V AS GHPT ALVR + P + L AG T++
Sbjct: 6 EEKKSRILVVGGTGYIGRHVVLASARLGHPTTALVRDLSPSDPAKSQLLQSFRDAGVTLL 65
Query: 61 KGSLEDYPSLLEAVRQVDVVICAVPTKQALEQKLLIRAIKDAGC--VKRFIPAEYGLDPT 118
G L D+ SLL AVR DVVI + Q +Q LI AIK+ G V+RF+P+E+GLDP
Sbjct: 66 HGDLYDHASLLSAVRDADVVISTLGALQIADQTKLIAAIKEGGGGNVRRFLPSEFGLDPD 125
Query: 119 KVQICGMDHGFYEKKIEIRHLIESECIPHTYICCNFLMRYLLPSLVQPGLDAPPRDEVKI 178
+ K +R +E+ +P+TY+ N+ Y LP++ Q A P D V I
Sbjct: 126 HTGAVEPARSIFTGKAAVRRAVEAAGVPYTYVVSNYFAGYALPTIGQNLPPARPVDSVVI 185
Query: 179 FGDGNTRGVFVEETDVAKFTICTIDDPRTLNNTLYLRPSGNVYSMNKLVDLWEKKINKFL 238
GDG T+ VFVEE D+ +T+ DPR N T+ +RP+ N S +LV LWEKK K L
Sbjct: 186 LGDGATKVVFVEEGDIGTYTVLAAVDPRAENKTVNIRPAKNAVSHEELVALWEKKTGKKL 245
Query: 239 NKIYITEEQLLKNIEDAPLPLKMDLIFIYSTFIKGDQTY-FEIDSRKEGTQLYPHVNYTT 297
++Y+ E+ +LK I+++ +PL + L ++ +I+G+ T + + E TQL+P V YTT
Sbjct: 246 ERVYVPEDAVLKQIQESEIPLNIVLSIAHAGYIRGETTTPLDPATAVEATQLFPDVQYTT 305
Query: 298 VDGYLDKLV 306
VD YL++L+
Sbjct: 306 VDDYLNRLL 314
>Os03g0259400 Similar to Leucoanthocyanidin reductase (EC 1.17.1.3)
(Leucocyanidin reductase)
Length = 358
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 168/306 (54%), Gaps = 9/306 (2%)
Query: 10 VLVVGATGRLGGCLVRASLAAGHPTFALVRPHHLAVPDSAPLTSL--AGATVVKGSL--- 64
L+VGATG +G + A L +G TF LVRP + +A + +L GA V++G +
Sbjct: 22 ALIVGATGYIGRFVAEACLDSGRDTFILVRPGNACPARAASVDALRQKGAVVIEGCVGGK 81
Query: 65 EDYPSLLEAVRQ--VDVVICAVPTKQALEQKLLIRAIKDAGCVKRFIPAEYGLDPTKVQI 122
E S+ A+R V+VVI + L+Q LI AI+ AG VKRF+P+E+G D + +
Sbjct: 82 EGRKSVEAALRARGVEVVISVMGGASILDQLGLIEAIRAAGTVKRFLPSEFGHDVDRARP 141
Query: 123 CGMDHGFYEKKIEIRHLIESECIPHTYICCNFLMRYLLPSLVQPGLDAPPRDEVKIFGDG 182
G FYE+K +R E+ +P+T+ICCN + + P PP D +I+GDG
Sbjct: 142 VGAGLRFYEEKRLVRRAAEASGVPYTFICCNSIAGWPYHDSTHPSELPPPLDRFQIYGDG 201
Query: 183 NTRGVFVEETDVAKFTICTIDDPRTLNNTLYLRPSGNVYSMNKLVDLWEKKINKFLNKIY 242
+ R FV +D+ KFTI D R++N ++ RP+ N+ S N++ LWE KI + L ++
Sbjct: 202 DVRAFFVAGSDIGKFTIRAAYDARSINKIVHFRPACNLLSTNEMASLWESKIGRTLPRVT 261
Query: 243 ITEEQLLKNIEDAPLPLKMDLIFIYSTFIKGDQTYFEIDSRK--EGTQLYPHVNYTTVDG 300
+TEE L+ D +P + + FI G QT+F ID + E + LYP + + T+D
Sbjct: 262 LTEEDLIAMAADDIIPESIVASLTHDIFINGCQTHFYIDGPRDIEISSLYPDIPFRTIDE 321
Query: 301 YLDKLV 306
D +
Sbjct: 322 CFDDYI 327
>Os06g0479400 Similar to Phenylcoumaran benzylic ether reductase homolog TH6
Length = 215
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 110/191 (57%), Gaps = 11/191 (5%)
Query: 6 TRSRVLVVGATGRLGGCLVRASLAAGHPTFALVRPHHLAVPDSAPLTSL----------- 54
+SR+L++G TG LG +V AS AGHPT ALVR P + S
Sbjct: 7 NKSRILIIGGTGHLGKFIVAASARAGHPTSALVRATAPPPPATGGGGSSSRARLLQSFRD 66
Query: 55 AGATVVKGSLEDYPSLLEAVRQVDVVICAVPTKQALEQKLLIRAIKDAGCVKRFIPAEYG 114
AG T+++G + D+ L++AVR DVVI V EQ +I AIK+AG +KRFIP+++G
Sbjct: 67 AGVTILQGDIGDHDLLVKAVRAADVVISVVGYHDVGEQMKIIAAIKEAGNIKRFIPSDFG 126
Query: 115 LDPTKVQICGMDHGFYEKKIEIRHLIESECIPHTYICCNFLMRYLLPSLVQPGLDAPPRD 174
D I ++ + +IR +E+E IP+T++ CNF Y LP+LVQPG P D
Sbjct: 127 NDADHAHIVEPAKATFDVEAQIRRTVEAEGIPYTFVSCNFFAGYYLPTLVQPGASGLPAD 186
Query: 175 EVKIFGDGNTR 185
+V I GDGNT+
Sbjct: 187 KVVILGDGNTK 197
>Os12g0263200 NmrA-like family protein
Length = 211
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 119/190 (62%), Gaps = 11/190 (5%)
Query: 7 RSRVLVVGATGRLGGCLVRASLAAGHPTFALVRPH-HLAVPDSAPLTSL--AGATVVKGS 63
+SRVL+VG TG +G +V ASLA GHPTF L+RP L + L + GA +++ S
Sbjct: 5 KSRVLIVGGTGYIGRRIVAASLAEGHPTFVLLRPEIGLDIDKLQILLAFKAQGARLLEAS 64
Query: 64 LEDYPSLLEAVRQVDVVICAVP-----TKQALEQKLLIRAIKDAGCVKRFIPAEYGLDPT 118
L+D+ L+ AVRQVDVV+ A+ + + Q L+ AIK+AG VKRF+P+E+G+DP+
Sbjct: 65 LDDHDGLVAAVRQVDVVVSAMSGVHLRSHNLMLQLKLVEAIKEAGNVKRFLPSEFGMDPS 124
Query: 119 KVQICGMDHG--FYEKKIEIRHLIESECIPHTYICCNFLMRYLLPSLVQPGLDAPPRDEV 176
++ ++ G +++K+EIR IE IPHTY+ N Y P+L Q PP++ V
Sbjct: 125 RMG-NALEPGRVTFDEKMEIRRAIEDAKIPHTYVSSNCFAAYFCPNLSQLTSFLPPKERV 183
Query: 177 KIFGDGNTRG 186
++GDGN +G
Sbjct: 184 NVYGDGNVKG 193
>Os01g0237333
Length = 121
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Query: 187 VFVEETDVAKFTICTIDDPRTLNNTLYLRPSGNVYSMNKLVDLWEKKINKFLNKIYITEE 246
+FV++ D++ TI +DPRT++ LY++P N+ S+N+LV + EKKI + L K Y+ EE
Sbjct: 1 MFVDDKDMSAVTIKAEEDPRTVDKILYVQPPANLCSLNQLVSVLEKKIGRDLEKCYVPEE 60
Query: 247 QLLKNIEDA-PLPLKMDLIFIYSTFIKGDQTYFEIDSRKEGTQLYPHVNYTTVDGYLDKL 305
+L IE A P PL L ++S + G + + R E T+LYP + Y TV+ Y D L
Sbjct: 61 ELAIKIEAASPFPLNFQLAIVHSALLPGVASCGQTAVRVEATELYPDMEYVTVEEYFDSL 120
Query: 306 V 306
+
Sbjct: 121 I 121
>Os01g0237366 NmrA-like family protein
Length = 171
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 75/137 (54%), Gaps = 19/137 (13%)
Query: 8 SRVLVVGATGRLGGCLVRASLAAGHPTFALV-RPHHLAVPDSAPLTSL-------AGATV 59
SR+LV+G TGRLG LV ASL AGHPT LV RP +P+ + GA +
Sbjct: 4 SRILVIGGTGRLGRHLVTASLDAGHPTAVLVRRPATAGARADSPVKAKLTEELCDNGARL 63
Query: 60 VKGSLEDYPSLLEAVRQVDVVICAV----PTKQALEQKLLIRAIKDAGCVKRFIPAEYGL 115
V G + D+ L+ A++ DVVICAV P K Q ++ AI+DAG VKRF+P+E G
Sbjct: 64 VYGDVNDHDILVAAIKNADVVICAVGHTTPHKLVENQIKIMEAIRDAGNVKRFVPSECG- 122
Query: 116 DPTKVQICGMDHGFYEK 132
G D G +K
Sbjct: 123 ------ASGADAGASKK 133
>Os01g0237500 NmrA-like family protein
Length = 97
Score = 76.6 bits (187), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 214 LRPSGNVYSMNKLVDLWEKKINKFLNKIYITEEQLLKNIEDAPLPLKMDLIFIYSTFIKG 273
+RP N S+ +LV LWEKK L K Y+++ QL +++AP P+ L ++ST + G
Sbjct: 1 VRPPANKLSLGQLVRLWEKKSGNTLQKRYVSDLQLANQVQEAPFPVNFQLAMVHSTLVAG 60
Query: 274 --DQTYFEIDSRKEGTQLYPHVNYTTVDGYLDKLV 306
+QT D E T+LYP +++ TVD YLD L+
Sbjct: 61 VCEQT-INPDVGAEATELYPEMDFLTVDSYLDALL 94
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.140 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,651,191
Number of extensions: 450698
Number of successful extensions: 1052
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1030
Number of HSP's successfully gapped: 11
Length of query: 306
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 205
Effective length of database: 11,762,187
Effective search space: 2411248335
Effective search space used: 2411248335
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)