BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0697300 Os02g0697300|AJ495787
(392 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0697300 ENTH/VHS domain containing protein 786 0.0
Os10g0578000 Similar to hepatocyte growth factor-regulated ... 335 3e-92
Os05g0475300 VHS domain containing protein 153 3e-37
Os01g0825700 Similar to VHS2 protein (Fragment) 147 2e-35
Os11g0199700 Similar to Seed protein B32E (Fragment) 140 2e-33
Os02g0273700 VHS domain containing protein 138 7e-33
Os01g0229200 VHS domain containing protein 133 2e-31
Os06g0332400 VHS domain containing protein 124 8e-29
Os08g0109000 ENTH/VHS domain containing protein 91 1e-18
Os05g0339000 VHS domain containing protein 86 5e-17
>Os02g0697300 ENTH/VHS domain containing protein
Length = 392
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/392 (97%), Positives = 383/392 (97%)
Query: 1 MSDNLMDKVSAFGERLKITGSEVSKKMTAGMSSMSFKMKEIFQGQTPADKIVEEATSENL 60
MSDNLMDKVSAFGERLKITGSEVSKKMTAGMSSMSFKMKEIFQGQTPADKIVEEATSENL
Sbjct: 1 MSDNLMDKVSAFGERLKITGSEVSKKMTAGMSSMSFKMKEIFQGQTPADKIVEEATSENL 60
Query: 61 DGPDWSANLEICDLINTEKVNSVELIRGIKKRIMLKDARVQYLSLVLLETIVKNCEKAFS 120
DGPDWSANLEICDLINTEKVNSVELIRGIKKRIMLKDARVQYLSLVLLETIVKNCEKAFS
Sbjct: 61 DGPDWSANLEICDLINTEKVNSVELIRGIKKRIMLKDARVQYLSLVLLETIVKNCEKAFS 120
Query: 121 EVAAERVLDEMVRLIDDPQTVVNNRNKALMLIEAWGESGDELRYLPVYEETYKSLKSRGV 180
EVAAERVLDEMVRLIDDPQTVVNNRNKALMLIEAWGESGDELRYLPVYEETYKSLKSRGV
Sbjct: 121 EVAAERVLDEMVRLIDDPQTVVNNRNKALMLIEAWGESGDELRYLPVYEETYKSLKSRGV 180
Query: 181 RFPGRDNESLAPIFTPARSVAEAEVDANFSQQTFEDVQVHTYTAEETKEAFDVARNSIEL 240
RFPGRDNESLAPIFTPARSVAEAEVDANFSQQTFEDVQVHTYTAEETKEAFDVARNSIEL
Sbjct: 181 RFPGRDNESLAPIFTPARSVAEAEVDANFSQQTFEDVQVHTYTAEETKEAFDVARNSIEL 240
Query: 241 LSTVLSSSPQQDALQDDLTSTLVQQCYQSQHTIQRMIETAGDNEAMLFEALSVNDEIQKV 300
LSTVLSSSPQQDALQDDLTSTLVQQCYQSQHTIQRMIETAGDNEAMLFEALSVNDEIQKV
Sbjct: 241 LSTVLSSSPQQDALQDDLTSTLVQQCYQSQHTIQRMIETAGDNEAMLFEALSVNDEIQKV 300
Query: 301 LSKYEQMKKPAASENAEQRPVVIPIATEHEDSATVGNEDALVRKPAGSRARSGGXXXXXX 360
LSKYEQMKKPAASENAEQRPVVIPIATEHEDSATVGNEDALVRKPAGSRARSGG
Sbjct: 301 LSKYEQMKKPAASENAEQRPVVIPIATEHEDSATVGNEDALVRKPAGSRARSGGDDDILD 360
Query: 361 XXXEMIFGKKGGSSSQEGPKKQDPKKDDLISF 392
EMIFGKKGGSSSQEGPKKQDPKKDDLISF
Sbjct: 361 DLDEMIFGKKGGSSSQEGPKKQDPKKDDLISF 392
>Os10g0578000 Similar to hepatocyte growth factor-regulated tyrosine kinase
substrate-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 241
Score = 335 bits (859), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 153/192 (79%), Positives = 177/192 (92%)
Query: 1 MSDNLMDKVSAFGERLKITGSEVSKKMTAGMSSMSFKMKEIFQGQTPADKIVEEATSENL 60
M DNLMDKV+A GERLK++G+EVS+KM+AG+S+MSFKMKE FQGQ ADKIV+EAT E +
Sbjct: 1 MGDNLMDKVNALGERLKVSGAEVSRKMSAGVSNMSFKMKEFFQGQNMADKIVDEATLETM 60
Query: 61 DGPDWSANLEICDLINTEKVNSVELIRGIKKRIMLKDARVQYLSLVLLETIVKNCEKAFS 120
D PDW+ NLEICD++NT VNS+ELIR IK+RIMLK+ RVQYL+LVLLET+VKNCEKAFS
Sbjct: 61 DAPDWATNLEICDMVNTGNVNSIELIRAIKRRIMLKNPRVQYLALVLLETVVKNCEKAFS 120
Query: 121 EVAAERVLDEMVRLIDDPQTVVNNRNKALMLIEAWGESGDELRYLPVYEETYKSLKSRGV 180
E+AAERVLDEMV+LIDDPQTVVNNRNKALMLIEAWGESGDELRYLPVYEETYKSL+SRG+
Sbjct: 121 EIAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGESGDELRYLPVYEETYKSLRSRGI 180
Query: 181 RFPGRDNESLAP 192
RFPGRD+E +P
Sbjct: 181 RFPGRDDEKNSP 192
>Os05g0475300 VHS domain containing protein
Length = 625
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 153/276 (55%), Gaps = 33/276 (11%)
Query: 47 PADKIVEEATSENLDGPDWSANLEICDLINTEKVNSVELIRGIKKRIMLKDARVQYLSLV 106
PA V++ATS L GPDW+ NLEICD +N ++ + ++++ +KKR+ KD RVQ+ +L
Sbjct: 14 PASTRVDKATSHLLQGPDWAINLEICDTLNADRWQTKDVVKAVKKRLQHKDPRVQFFTLT 73
Query: 107 LLETIVKNC-EKAFSEVAAERVLDEMVRLIDDPQTVVNNRNKALMLIEAWGES--GDELR 163
LLET++KNC E EV + +L EMVR++ + R+K L+L+++W E+ G +
Sbjct: 74 LLETMMKNCGEYVHFEVVEQHILQEMVRIVQK-KHDTQVRDKVLILLDSWQEAFGGPGGK 132
Query: 164 YLPVYEETYKSLKSRGVRFPGRDNESLAPIFTPARSVAEAEVDANFSQQTFEDVQVHTYT 223
Y P Y +Y LK G+ FP R ++ PIFTP A Q++ TY
Sbjct: 133 Y-PQYYWSYIELKRSGIMFPRRPVDA-PPIFTPP---------ATHHTQSYGSP---TYP 178
Query: 224 AEETKEAF--DV----------ARNSIELLSTVLSSSPQQD--ALQDDLTSTLVQQCYQS 269
A E DV R++ ELL ++++ D A++D++ S LV QC +
Sbjct: 179 AGSLNERMTSDVETLSLGDLNNIRDTTELLCDMVNALNPSDRMAVKDEIISELVTQCRSN 238
Query: 270 QHTIQRMIETAGDNEAMLFEALSVNDEIQKVLSKYE 305
Q + R + + G NE +L + L +ND +Q VL+K++
Sbjct: 239 QQKLMRFVSSTG-NEELLKQGLEINDHLQSVLAKHD 273
>Os01g0825700 Similar to VHS2 protein (Fragment)
Length = 597
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 163/298 (54%), Gaps = 29/298 (9%)
Query: 52 VEEATSENLDGPDWSANLEICDLINTEKVNSVELIRGIKKRIMLKDARVQYLSLVLLETI 111
VE+ATS L GPDW+ NLEICD+IN + + ++++ +KKR+ KD +VQ+ +L LLET+
Sbjct: 22 VEKATSHLLMGPDWAVNLEICDIINADVWQTKDVVKAVKKRLQNKDPKVQFYALTLLETM 81
Query: 112 VKNC-EKAFSEVAAERVLDEMVRLIDDPQTVVNNRNKALMLIEAWGES--GDELRYLPVY 168
+KNC E EVA + VL EMV++I ++ R+K L+L+++W E+ G +Y P Y
Sbjct: 82 MKNCGEYVQLEVAEQHVLQEMVKIIQKKNDML-VRDKILLLLDSWQEAFGGPGSKY-PQY 139
Query: 169 EETYKSLKSRGVRFPGRDNESLAPIFT-PARSVAEAEVDANFSQQTFEDVQVHTYTAEET 227
Y +K G FP R ++ PIFT PA +++ + + ++ + ET
Sbjct: 140 HFAYLEVKRIGAVFPRRPIDA-PPIFTPPATHTSQSYGSPRYEAGSLNEIMS---SDVET 195
Query: 228 KEAFDV--ARNSIELLSTVLSSSPQQD--ALQDDLTSTLVQQCYQSQHTIQRMIETAGDN 283
D+ RN ELL ++ + D A++D++ + LV QC +Q + + + + G N
Sbjct: 196 LSLGDLNNIRNVTELLCDMVHALNPSDHMAVKDEIITDLVSQCRSNQQKLMQFVSSTG-N 254
Query: 284 EAMLFEALSVNDEIQKVLSKYEQMKKP--------------AASENAEQRPVVIPIAT 327
E +L + L +ND +Q ++SKY+ M A E+ ++P PI+T
Sbjct: 255 EQLLKQGLEINDRLQNIISKYDIMASSTHLAVEAPPADNVEAPKEDPAEKPSAPPIST 312
>Os11g0199700 Similar to Seed protein B32E (Fragment)
Length = 588
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 156/275 (56%), Gaps = 23/275 (8%)
Query: 51 IVEEATSENLDGPDWSANLEICDLINTEKVNSVELIRGIKKRIMLKDARVQYLSLVLLET 110
E ATS+ L GPDW+ N+E+CD+IN + + + ++ +KKR+ K+++VQ L+L +LET
Sbjct: 7 CAERATSDMLIGPDWAVNIELCDIINMDPGQAKDTLKLLKKRLGNKNSKVQILTLYVLET 66
Query: 111 IVKNCEKAFSEVAAER-VLDEMVRLIDDPQTVVNNRNKALMLIEAW-----GESGDELRY 164
+ KNC + ER +L EMV+++ + +N R K L LI+ W G SG RY
Sbjct: 67 LSKNCGDVVYQQIIERDILSEMVKIVKK-KPDLNVREKILSLIDTWQVAFGGASG---RY 122
Query: 165 LPVYEETYKSLKSRGVRFPGRDNESLAPIFTPARSVAEAEVDANFSQ-QTFED--VQVHT 221
P Y Y+ L++ GV FP R+ E+ P+FTP ++ + Q++ED +Q
Sbjct: 123 -PQYHAAYQELRNAGVDFPPRE-ENTVPLFTPPQTQPLRQPHLYPPPGQSYEDAAIQASL 180
Query: 222 YTAEETKEAFDV-----ARNSIELLSTVLSS--SPQQDALQDDLTSTLVQQCYQSQHTIQ 274
++ + A + AR +++L +L++ + +++++ LV QC Q +
Sbjct: 181 QSSAPSAPALSLSEIQSARGIVDVLDEMLNALDHRHPEGVREEVIVDLVGQCRSYQGRVM 240
Query: 275 RMIETAGDNEAMLFEALSVNDEIQKVLSKYEQMKK 309
++ GD E++LF+AL +NDE+Q+VL +++ + K
Sbjct: 241 DLVSNTGD-ESLLFQALGLNDELQRVLQRHDDIAK 274
>Os02g0273700 VHS domain containing protein
Length = 634
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 149/262 (56%), Gaps = 12/262 (4%)
Query: 51 IVEEATSENLDGPDWSANLEICDLINTEKVNSVELIRGIKKRIMLKDARVQYLSLVLLET 110
+V+ AT++ L GPDW+ NLEICD +N + + ++++ IKKRI ++A+VQ L+L LLET
Sbjct: 5 LVDRATNDMLIGPDWAMNLEICDTLNRDPGQAKDVVKSIKKRIAHRNAKVQLLALTLLET 64
Query: 111 IVKNC-EKAFSEVAAERVLDEMVRLIDDPQTVVNNRNKALMLIEAWGE--SGDELRYLPV 167
++KNC + +VA + +L EMV+++ + + + K L LI+ W E G RY P
Sbjct: 65 MIKNCGDIVHMQVAEKDILHEMVKIVKK-RPDFHVKEKILTLIDTWQEVFGGVRARY-PQ 122
Query: 168 YEETYKSLKSRGVRFPGRDNESLAPIFTPARSVAEAEVDANF--SQQTFEDVQVHTYTAE 225
Y Y+ L G FP R N S+ PIFTP ++ A+ +QQ V +
Sbjct: 123 YYAAYQELLRAGAVFPQRSNGSV-PIFTPPQTQPLQNYPASLRSAQQEPPGSSVPDLPSL 181
Query: 226 ETKEAFDVARNSIELLSTVLSS--SPQQDALQDDLTSTLVQQCYQSQHTIQRMIETAGDN 283
E AR +++LS +L++ ++ L+ ++ LV QC + + ++ T N
Sbjct: 182 SLAE-IQNARGIMDVLSEMLNALDPSNREGLRQEVIVDLVDQCRSYKQRVVELVNTT-SN 239
Query: 284 EAMLFEALSVNDEIQKVLSKYE 305
E +L + LS+ND++Q+VL+K++
Sbjct: 240 EELLSQGLSLNDDLQRVLAKHD 261
>Os01g0229200 VHS domain containing protein
Length = 711
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 48 ADKIVEEATSENLDGPDWSANLEICDLINTEKVNSVELIRGIKKRIMLKDARVQYLSLVL 107
A +V+ ATS+ L GPDW+ N+EICD+ N + S ++++ +KKRI K+ +VQ L+L L
Sbjct: 2 AGSMVDRATSDMLIGPDWAKNMEICDICNRDPGQSKDVVKALKKRIGHKNPKVQILALTL 61
Query: 108 LETIVKNCEKAFSEVAAER-VLDEMVRLIDDPQTVVNNRNKALMLIEAWGES--GDELRY 164
LET +KNC F AER VL EMV+++ ++ N + K L +I+ W E+ G RY
Sbjct: 62 LETAIKNCGDIFHMHVAERDVLHEMVKIVKK-KSDQNVKEKVLTMIDTWQEAFGGPRARY 120
Query: 165 LPVYEETYKSLKSRGVRFPGRDNESLAPIFTPARSVAEAEVDANFSQQTFEDVQVHTYTA 224
P Y Y L G FP R + AP+F +S A + + Q E + + A
Sbjct: 121 -PQYYAAYHDLVRAGAAFPKRSDRP-APLFN-GQSPAGRNMRSPDQQDEAESSAGNDFPA 177
Query: 225 EETKEAFDVARNSIELLSTVLSS--SPQQDALQDDLTSTLVQQCYQSQHTIQRMIETAGD 282
E AR +++L+ +L++ ++ L+ ++ LV QC + + ++ D
Sbjct: 178 LSMSE-IQNARGIMDVLAEMLNALDPGNREGLRQEVIVELVDQCRTYKQRVVLLVNATAD 236
Query: 283 NEAMLFEALSVNDEIQKVLSKYE 305
E ++ + L++ND++Q+VL+K++
Sbjct: 237 EE-LMSQGLALNDDLQRVLAKHD 258
>Os06g0332400 VHS domain containing protein
Length = 683
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 156/272 (57%), Gaps = 21/272 (7%)
Query: 47 PADKIVEEATSENLDGPDWSANLEICDLINTEKVNSVELIRGIKKRIMLKDARVQYLSLV 106
P +V+ ATSE+L GPDWS NLEICD++N + + ++++ IKKRI K++++Q L+L
Sbjct: 2 PQSVLVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQLLALT 61
Query: 107 LLETIVKNCEKAFSEVAAER-VLDEMVRLIDDPQTVVNNRNKALMLIEAWGES--GDELR 163
LLET++KNC AER +L EMV++ + + + K L+LI+ W E+ G R
Sbjct: 62 LLETLIKNCGDFVHMHVAERDILHEMVKIAKK-KPDYHVKEKILILIDTWQEAFGGSRAR 120
Query: 164 YLPVYEETYKSLKSRGVRFPGRDNESLAPIFTPA-----RSVAEAEVDANFSQQTFED-- 216
Y P Y Y+ L G FP R + S+ PI+TP R++ A + Q+ E
Sbjct: 121 Y-PQYYVAYQELLRAGAVFPQRPDSSV-PIYTPPQTQPLRNLPPALRNTERQQEAPESSS 178
Query: 217 -VQVHTYTAEETKEAFDVARNSIELLSTVLSS--SPQQDALQDDLTSTLVQQCYQSQHTI 273
+V T + E + AR +++LS +L++ ++ L+ ++ LV QC + +
Sbjct: 179 TPEVPTLSLTEIQN----ARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRV 234
Query: 274 QRMIETAGDNEAMLFEALSVNDEIQKVLSKYE 305
+++ + D E +L + LS+ND++Q+VL+K++
Sbjct: 235 VQLVNSTTDEE-LLSQGLSLNDDLQRVLAKHD 265
>Os08g0109000 ENTH/VHS domain containing protein
Length = 401
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 139/270 (51%), Gaps = 16/270 (5%)
Query: 48 ADKIVEEATSENLDGPDWSANLEICDLINTEKVNSVELIRGIKKRIMLKDARVQYLSLVL 107
A ++V+ ATSE L DW+ N+EIC+L+ + + ++I+ IKK + + Q +++L
Sbjct: 2 ASEMVKAATSEKLKEMDWAKNIEICELVAQDPGKAKDVIKPIKKYLGSRSKNTQLYAVML 61
Query: 108 LETIVKNC-EKAFSEVAAERVLDEMVRLIDDPQTVVNNRNKALMLIEAWGES-GDELRYL 165
LE ++ NC E +V +L +V+++ +T + R K +L++A S G
Sbjct: 62 LEMLMNNCGEPIHKQVIDNGLLPILVKIVKK-KTELPVREKIFLLLDATQTSLGGVKGKF 120
Query: 166 PVYEETYKSLKSRGVRFPGRDN----ESLAPIFTPARSVAEAEVDANFSQQTFEDVQ--V 219
P Y Y L S GV+F R N ++ AP+ P ++ E + N + ++ Q V
Sbjct: 121 PQYYGAYYELVSAGVQFSNRPNVVVTQAQAPVPVPEPTI---EPNNNSLSRRLDEGQKEV 177
Query: 220 HTYTAEETKEAFDVARNSIELLSTVLSS-SPQQ-DALQDDLTSTLVQQCYQSQHTIQRMI 277
H E+ A + +E+L VL S P+ + D+ LV+QC + I ++
Sbjct: 178 HAQPVSES-SIIRKASSVMEVLKDVLDSMDPRHPEGATDEFVLDLVEQCTFQKQRIMHLV 236
Query: 278 ETAGDNEAMLFEALSVNDEIQKVLSKYEQM 307
T+ D E ++ +A+ +N+E+ KVL +++ +
Sbjct: 237 MTSRD-EVVVSQAIELNEELHKVLVRHDAL 265
>Os05g0339000 VHS domain containing protein
Length = 136
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Query: 52 VEEATSENLDGPDWSANLEICDLINTEKVNSVELIRGIKKRIMLKDARVQYLSLVLLETI 111
V++ATSE L GPDW+ N++ICD +N++ + E+I+ +KKR+ K+++VQ+ +L LLET+
Sbjct: 8 VDKATSELLLGPDWTLNIDICDAVNSDHGQAKEVIKALKKRLQHKNSKVQFFALTLLETL 67
Query: 112 VKNC-EKAFSEVAAERVLDEMVRLIDDPQTVVNNRNKALMLIEAWGESGDELRYLPVYEE 170
+KNC + S+V +L EM++++ T N ++ + + + V+
Sbjct: 68 MKNCGDHVHSQVVERDILQEMIKIVKKKVTFFPYGNFGVIYLRTTVIKCHLIFHCHVFLR 127
Query: 171 TYKSL 175
Y SL
Sbjct: 128 PYTSL 132
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.311 0.127 0.343
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,405,639
Number of extensions: 436224
Number of successful extensions: 1012
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 998
Number of HSP's successfully gapped: 10
Length of query: 392
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 289
Effective length of database: 11,657,759
Effective search space: 3369092351
Effective search space used: 3369092351
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 157 (65.1 bits)