BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0529600 Os02g0529600|AK100984
(480 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0529600 Similar to Xyloglucan 6-xylosyltransferase (EC... 862 0.0
Os12g0149300 Similar to Xyloglucan 6-xylosyltransferase (EC... 601 e-172
Os03g0300000 Similar to Xyloglucan 6-xylosyltransferase (EC... 472 e-133
Os03g0306100 Galactosyl transferase family protein 427 e-120
Os03g0305800 Galactosyl transferase family protein 416 e-116
Os02g0723200 Similar to Alpha galactosyltransferase (Fragment) 300 2e-81
Os11g0546500 Galactosyl transferase family protein 293 2e-79
>Os02g0529600 Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1)
Length = 480
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/460 (91%), Positives = 421/460 (91%)
Query: 21 LPMTAPRPRGASPLSSHGHHHRSRKIHRTFNNVKITVLCGLVTILVLRGTIGLNLSLPNQ 80
LPMTAPRPRGASPLSSHGHHHRSRKIHRTFNNVKITVLCGLVTILVLRGTIGLNLSLPNQ
Sbjct: 21 LPMTAPRPRGASPLSSHGHHHRSRKIHRTFNNVKITVLCGLVTILVLRGTIGLNLSLPNQ 80
Query: 81 PTDADALAGAKAVEDIDRILREIRSXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXXXX 140
PTDADALAGAKAVEDIDRILREIRS SF
Sbjct: 81 PTDADALAGAKAVEDIDRILREIRSDGGADDDAAAAGDLAGSFNATALNATEAAAAYASA 140
Query: 141 XXXXXXGPKISDWDGQRRRWLRQNPGFPSTVAGGKPRILLVTGSQPGPCDNPLGDHYLLK 200
GPKISDWDGQRRRWLRQNPGFPSTVAGGKPRILLVTGSQPGPCDNPLGDHYLLK
Sbjct: 141 VERYALGPKISDWDGQRRRWLRQNPGFPSTVAGGKPRILLVTGSQPGPCDNPLGDHYLLK 200
Query: 201 TTKNKIDYCRLHGIEIVHNLAHLDTELAGYWAKLPLLRRLMLSHPEVEWIWWMDSDALFT 260
TTKNKIDYCRLHGIEIVHNLAHLDTELAGYWAKLPLLRRLMLSHPEVEWIWWMDSDALFT
Sbjct: 201 TTKNKIDYCRLHGIEIVHNLAHLDTELAGYWAKLPLLRRLMLSHPEVEWIWWMDSDALFT 260
Query: 261 DMAFELPLSRYQDRNLIIHGYQDLLFEKHSWIALNTGSFLFRNCQWSLDLLDAWAPMGPK 320
DMAFELPLSRYQDRNLIIHGYQDLLFEKHSWIALNTGSFLFRNCQWSLDLLDAWAPMGPK
Sbjct: 261 DMAFELPLSRYQDRNLIIHGYQDLLFEKHSWIALNTGSFLFRNCQWSLDLLDAWAPMGPK 320
Query: 321 GFIRDEAGKILTANLKGRPAFEADDQSALIYLLLSQKEKWMNKVFIENSYYLHGFWAGLV 380
GFIRDEAGKILTANLKGRPAFEADDQSALIYLLLSQKEKWMNKVFIENSYYLHGFWAGLV
Sbjct: 321 GFIRDEAGKILTANLKGRPAFEADDQSALIYLLLSQKEKWMNKVFIENSYYLHGFWAGLV 380
Query: 381 DKYEEMMENHHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLRSMERAFNFADNQVLRL 440
DKYEEMMENHHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLRSMERAFNFADNQVLRL
Sbjct: 381 DKYEEMMENHHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLRSMERAFNFADNQVLRL 440
Query: 441 YGFAHKGLESPKIKRVRNQTTKPIDDKENLDVKAKISTTS 480
YGFAHKGLESPKIKRVRNQTTKPIDDKENLDVKAKISTTS
Sbjct: 441 YGFAHKGLESPKIKRVRNQTTKPIDDKENLDVKAKISTTS 480
>Os12g0149300 Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1)
Length = 463
Score = 601 bits (1550), Expect = e-172, Method: Compositional matrix adjust.
Identities = 294/447 (65%), Positives = 341/447 (76%), Gaps = 10/447 (2%)
Query: 42 RSRKIHRTFNNVKITVLCGLVTILVLRGTIGLNL-----SLPNQPTDADALAGAKAVEDI 96
R +++ RTFNNVKIT++CG +T+LVLRGT+G+NL A A+ VEDI
Sbjct: 17 RGKQMQRTFNNVKITLICGFITLLVLRGTVGINLLTYGVGGGGGSDAVAAAEEARVVEDI 76
Query: 97 DRILREIRSXXXXXXXXXXX----XXXXXSFXXXXXXXXXXXXXXXXXXXXXXXGPKISD 152
+RILREIRS + GPK++
Sbjct: 77 ERILREIRSDTDDDDDDEEEEPLGVDASTTTTTNSTTTTATAARRRSSNHTYTLGPKVTR 136
Query: 153 WDGQRRRWLRQNPGFPSTVAGGKPRILLVTGSQPGPCDNPLGDHYLLKTTKNKIDYCRLH 212
W+ +RR+WL +NPGFPS A GKPRILLVTGSQP PCD+ GDHYLLK TKNKIDYCR+H
Sbjct: 137 WNAKRRQWLSRNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDHYLLKATKNKIDYCRIH 196
Query: 213 GIEIVHNLAHLDTELAGYWAKLPLLRRLMLSHPEVEWIWWMDSDALFTDMAFELPLSRYQ 272
GIEIVH++AHLD ELAGYWAKLPLLRRLMLSHPEVEW+WWMDSDALFTDMAFELPL+RY
Sbjct: 197 GIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSDALFTDMAFELPLARYD 256
Query: 273 DRNLIIHGYQDLLFEKHSWIALNTGSFLFRNCQWSLDLLDAWAPMGPKGFIRDEAGKILT 332
NL+IHGY +LLF K SWIALNTGSFL RNCQWSL+LLDAWAPMGPKG +RDEAGK+LT
Sbjct: 257 TSNLVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAPMGPKGRVRDEAGKVLT 316
Query: 333 ANLKGRPAFEADDQSALIYLLLSQKEKWMNKVFIENSYYLHGFWAGLVDKYEEMMENHHP 392
A+L GRPAFEADDQSALI++LL+QKE+WM KV++E+ Y+LHGFWAGLVDKYEEMME HHP
Sbjct: 317 ASLTGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDKYEEMMERHHP 376
Query: 393 GLGDERWPFVTHFVGCKPCGSYGDYPVERCLRSMERAFNFADNQVLRLYGFAHKGLESPK 452
GLGDERWPFVTHFVGCKPCG YGDYP ERCL MERAFNFADNQVLRLYGF H+ L S +
Sbjct: 377 GLGDERWPFVTHFVGCKPCGGYGDYPRERCLGGMERAFNFADNQVLRLYGFRHRSLASAR 436
Query: 453 IKRVRNQTTKPIDDKE-NLDVKAKIST 478
++RV N+T P+ +KE L + AKI +
Sbjct: 437 VRRVANRTDNPLVNKEAALKMDAKIES 463
>Os03g0300000 Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1)
Length = 348
Score = 472 bits (1214), Expect = e-133, Method: Compositional matrix adjust.
Identities = 217/324 (66%), Positives = 271/324 (83%)
Query: 147 GPKISDWDGQRRRWLRQNPGFPSTVAGGKPRILLVTGSQPGPCDNPLGDHYLLKTTKNKI 206
GPKISDWD QR W R++P P V KPR+LLVTGS P PC+NP+GDHYLLK+ KNK+
Sbjct: 10 GPKISDWDEQRAAWHRRHPETPPFVNDVKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKM 69
Query: 207 DYCRLHGIEIVHNLAHLDTELAGYWAKLPLLRRLMLSHPEVEWIWWMDSDALFTDMAFEL 266
DYCR+HG+EI +N+A LD E+AG+WAKLPLLR L+L+HPE+E++WWMDSDA+F+DMAFEL
Sbjct: 70 DYCRVHGLEIFYNMALLDAEMAGFWAKLPLLRALLLAHPEIEFLWWMDSDAMFSDMAFEL 129
Query: 267 PLSRYQDRNLIIHGYQDLLFEKHSWIALNTGSFLFRNCQWSLDLLDAWAPMGPKGFIRDE 326
P RY NLI+HG+ +++++ +WI LNTGSFL RNCQWSLD LD WAPMGPKG +R E
Sbjct: 130 PWERYGPYNLIMHGWDEMVYDDKNWIGLNTGSFLLRNCQWSLDFLDTWAPMGPKGPVRIE 189
Query: 327 AGKILTANLKGRPAFEADDQSALIYLLLSQKEKWMNKVFIENSYYLHGFWAGLVDKYEEM 386
AGK+LT LK RP FEADDQSA++Y+L +++EKW +KV++EN YYLHG+W LVD+YEEM
Sbjct: 190 AGKVLTKYLKDRPVFEADDQSAMVYILATEREKWGDKVYLENGYYLHGYWGILVDRYEEM 249
Query: 387 MENHHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLRSMERAFNFADNQVLRLYGFAHK 446
+EN+HPGLGD RWP VTHFVGCKPCG +GDYPVERCL+ MERAFNF DNQ+L++YGF HK
Sbjct: 250 LENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMERAFNFGDNQILQMYGFTHK 309
Query: 447 GLESPKIKRVRNQTTKPIDDKENL 470
L S K+KR+RN+T+ P+D K+ L
Sbjct: 310 SLGSRKVKRIRNETSNPLDVKDEL 333
>Os03g0306100 Galactosyl transferase family protein
Length = 449
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 194/321 (60%), Positives = 249/321 (77%), Gaps = 5/321 (1%)
Query: 147 GPKISDWDGQRRRWLRQNPGFPSTVA-GGKPRILLVTGSQPGPCDNPLGDHYLLKTTKNK 205
G I +D +R WL +P FP+ VA G+PR+L+VTGS P C +P GDH LL+ KNK
Sbjct: 112 GRTILGYDARRSAWLAAHPEFPARVAPAGRPRVLVVTGSAPARCPDPDGDHLLLRAFKNK 171
Query: 206 IDYCRLHGIEIVHNLAHLDTELAGYWAKLPLLRRLMLSHPEVEWIWWMDSDALFTDMAFE 265
+DYCR+HG+++ +N A LD E++G+WAKLPLLR LM++HPE E IWW+DSDA+FTDM FE
Sbjct: 172 VDYCRIHGLDVFYNTAFLDAEMSGFWAKLPLLRMLMVAHPEAELIWWVDSDAVFTDMLFE 231
Query: 266 LPLSRYQDRNLIIHGYQDLLFEKHSWIALNTGSFLFRNCQWSLDLLDAWAPMGPKGFIRD 325
+P RY NL++HG++ +F++ SWI +NTGSFL RNCQWSLDLLDAWAPMGP+G +RD
Sbjct: 232 IPWERYAVHNLVLHGWEAKVFDEKSWIGVNTGSFLIRNCQWSLDLLDAWAPMGPRGPVRD 291
Query: 326 EAGKILTANLKGRPAFEADDQSALIYLLLSQKEKWMNKVFIENSYYLHGFWAGLVDKYEE 385
G++ L GRP FEADDQSALIYLL++Q+++W +KVFIE+SY L+GFW G+VDKYEE
Sbjct: 292 RYGELFAEELSGRPPFEADDQSALIYLLVTQRQRWGDKVFIESSYDLNGFWEGIVDKYEE 351
Query: 386 MMENHHPGLGDERWPFVTHFVGCKPCGSYGD-YPVERCLRSMERAFNFADNQVLRLYGFA 444
+ G D RWPFVTHFVGCKPC Y D YP ERC R MERAFNFAD+Q+L+LYGFA
Sbjct: 352 L---RRAGRDDGRWPFVTHFVGCKPCRRYADSYPAERCRRGMERAFNFADDQILKLYGFA 408
Query: 445 HKGLESPKIKRVRNQTTKPID 465
H+ L + ++RVRN+T +P+D
Sbjct: 409 HESLNTTAVRRVRNETGEPLD 429
>Os03g0305800 Galactosyl transferase family protein
Length = 483
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 185/321 (57%), Positives = 240/321 (74%), Gaps = 2/321 (0%)
Query: 147 GPKISDWDGQRRRWLRQNPGFPSTVAGGKPRILLVTGSQPGPCDNPLGDHYLLKTTKNKI 206
GP ++ +D +R WLR + FP++V G+PR+L+VTGS P C +P GDH LL+ KNK+
Sbjct: 135 GPAVTGYDARRAEWLRDHTEFPASVGRGRPRVLMVTGSAPRRCKDPEGDHLLLRALKNKV 194
Query: 207 DYCRLHGIEIVHNLAHLDTELAGYWAKLPLLRRLMLSHPEVEWIWWMDSDALFTDMAFEL 266
DYCR+HG +I ++ LD E++G+W KLPLLR LML+HPE E +WW+DSD +FTDM FE
Sbjct: 195 DYCRVHGFDIFYSNTVLDAEMSGFWTKLPLLRALMLAHPETELLWWVDSDVVFTDMLFEP 254
Query: 267 PLSRYQDRNLIIHGYQDLLFEKHSWIALNTGSFLFRNCQWSLDLLDAWAPMGPKGFIRDE 326
P RY+ NL+IHG+ ++ +W+ LN GSF+ RNCQWSLDLLDAWAPMGP G +RD
Sbjct: 255 PWGRYRRHNLVIHGWDGAVYGAKTWLGLNAGSFIIRNCQWSLDLLDAWAPMGPPGPVRDM 314
Query: 327 AGKILTANLKGRPAFEADDQSALIYLLLSQKEKWMNKVFIENSYYLHGFWAGLVDKYEEM 386
GKI L RP +EADDQSAL++LL++Q+ +W KVF+ENSY LHGFWA +VD+YEEM
Sbjct: 315 YGKIFAETLTNRPPYEADDQSALVFLLVTQRHRWGAKVFLENSYNLHGFWADIVDRYEEM 374
Query: 387 MEN-HHPGLGDERWPFVTHFVGCKPCGS-YGDYPVERCLRSMERAFNFADNQVLRLYGFA 444
HPGLGD+RWP +THFVGCKPCG Y ERC R M+RAFNFAD+Q+L LYGFA
Sbjct: 375 RRQWRHPGLGDDRWPLITHFVGCKPCGGDDASYDGERCRRGMDRAFNFADDQILELYGFA 434
Query: 445 HKGLESPKIKRVRNQTTKPID 465
H+ L++ ++RVRN T +P+D
Sbjct: 435 HESLDTMAVRRVRNDTGRPLD 455
>Os02g0723200 Similar to Alpha galactosyltransferase (Fragment)
Length = 447
Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/336 (43%), Positives = 197/336 (58%), Gaps = 41/336 (12%)
Query: 150 ISDWDGQRRRWLRQNPGFPSTVAGGKPRILLVTGSQPGPCDNPLGDHYLLKTTKNKIDYC 209
I WD +R WLR +P GG R+L+V+GSQP PC +P GD L + KNK+DYC
Sbjct: 97 IVGWDEKRAEWLRAHP---ELAGGGGERVLMVSGSQPEPCGSPAGDSLLTRLLKNKLDYC 153
Query: 210 RLHGIEIVHNLAHLDTELAGYWAKLPLLRRLMLSHPEVEWIWWMDSDALFTDMAFELPLS 269
RL+G+++++N A L + YWAK+P++R M++HPE EW+WW+DSDA+ TDM F LPLS
Sbjct: 154 RLNGVQLLYNTALLRPSMDRYWAKIPVVRAAMVAHPEAEWVWWVDSDAVLTDMDFRLPLS 213
Query: 270 RYQDRNLIIHGYQDLLFEKHSWIALNTGSFLFRNCQWSLDLLDAWAPMGPKGFIRDEAGK 329
RY+D N + HG+ L++E SW +LN G FL RNCQWSLD +DAWA MGP G
Sbjct: 214 RYRDHNFVAHGWPHLVYESRSWTSLNAGVFLIRNCQWSLDFMDAWAAMGPDSPEYQHWGA 273
Query: 330 ILTANLKGRPAFEADDQSALIYLLLSQKEKWMNKVFIENSYYLHGFW-------AGLVDK 382
+LT+ K + E+DDQSAL+Y+LL W +KV++E+ YY G+W + ++
Sbjct: 274 VLTSTFKDKVFNESDDQSALVYMLLQSGSPWRDKVYLESDYYFEGYWLEIAGRLGNITER 333
Query: 383 YEEMMENHHP-----------------------------GLGDERWPFVTHFVGCKPCGS 413
YE M P G+ R PFVTHF GC+PC
Sbjct: 334 YEAMERGAAPLRRRHAEAEHASYAAARDAALAGAGLAESGVSGWRRPFVTHFTGCQPCSG 393
Query: 414 YGD--YPVERCLRSMERAFNFADNQVLRLYGFAHKG 447
+ + Y + C + RA +FAD+QVLR YGF H G
Sbjct: 394 HRNEHYTGKSCDEGIRRALSFADDQVLRAYGFRHAG 429
>Os11g0546500 Galactosyl transferase family protein
Length = 483
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/350 (40%), Positives = 203/350 (58%), Gaps = 45/350 (12%)
Query: 150 ISDWDGQRRRWLR-QNPGFPSTVAGGKPRILLVTGSQPGPCDNPLGDHYLLKTTKNKIDY 208
I+ WD +R W+R + P + A G+ R+++V+GSQ PC GDH L + KNK+DY
Sbjct: 124 ITGWDARRAAWMRLRYPRGLNATAAGRERVVMVSGSQAPPCRGEGGDHLLFRFLKNKVDY 183
Query: 209 CRLHGIEIVHNLAHLDTELAGYWAKLPLLRRLMLSHPEVEWIWWMDSDALFTDMAFELPL 268
CRLHG+E+++N A L + YWAK+P +R ML+HP+ EW+WW+D+DA+FTDM F LPL
Sbjct: 184 CRLHGVELLYNNALLQPRMLAYWAKIPAVRAAMLAHPDAEWVWWVDADAVFTDMDFSLPL 243
Query: 269 SRYQDRNLIIHGYQDLLFEKHSWIALNTGSFLFRNCQWSLDLLDAWAPMGPKGFIRDEAG 328
+Y+D NL+++G+ ++ + SW+ LN G FL RNCQWSLD +DAWA MGP G
Sbjct: 244 HKYKDHNLVVYGWNKEVYGERSWVGLNAGVFLIRNCQWSLDFMDAWARMGPASPEYARWG 303
Query: 329 KILTANLKGRPAFEADDQSALIYLLLSQKEKWMNKVFIENSYYLHGFWAGLVDKYEEM-- 386
+L L+G+ E+DDQSAL+YLL +EKW K ++E Y+ G+W +VD+ +++
Sbjct: 304 SVLHDTLRGKSDKESDDQSALVYLLSEHEEKWGAKTYLEKGYFFQGYWVEVVDRLDDIAA 363
Query: 387 ---------------MENHHPGLGDERW-------------------------PFVTHFV 406
+ H ER+ PFVTHF
Sbjct: 364 RYEAAERRPSAAAAHLRRRHAEREHERYAAARNAAVRGAVPGPAGGGQSGWRRPFVTHFT 423
Query: 407 GCKPCGSYGD--YPVERCLRSMERAFNFADNQVLRLYGFAHKGLESPKIK 454
GC+PCG + Y + C M RA NFAD+QVLR YG+ HK S +++
Sbjct: 424 GCQPCGGEPNKIYSKKSCADGMNRALNFADDQVLRNYGYRHKDPLSDEVR 473
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.139 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,964,296
Number of extensions: 683735
Number of successful extensions: 1456
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1446
Number of HSP's successfully gapped: 8
Length of query: 480
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 375
Effective length of database: 11,553,331
Effective search space: 4332499125
Effective search space used: 4332499125
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)