BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0463500 Os02g0463500|AK107401
(84 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0463500 Peptidase S10, serine carboxypeptidase family ... 175 6e-45
Os10g0101100 Peptidase S10, serine carboxypeptidase family ... 92 1e-19
Os11g0643400 87 4e-18
Os12g0257000 Serine carboxypeptidase I precursor (EC 3.4.16... 85 2e-17
Os04g0321700 Similar to Serine carboxypeptidase I precursor... 82 6e-17
Os04g0176400 Peptidase S10, serine carboxypeptidase family ... 79 1e-15
Os10g0101200 Peptidase S10, serine carboxypeptidase family ... 79 1e-15
Os11g0432900 Peptidase S10, serine carboxypeptidase family ... 78 1e-15
Os12g0581400 74 2e-14
Os11g0460800 Peptidase S10, serine carboxypeptidase family ... 74 2e-14
>Os02g0463500 Peptidase S10, serine carboxypeptidase family protein
Length = 84
Score = 175 bits (444), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 84/84 (100%), Positives = 84/84 (100%)
Query: 1 NAIGDHALLVPFSATLEWLKTLNYKEIEKWHPWFVEKQIAGYSVRYENNILFATIKGAGH 60
NAIGDHALLVPFSATLEWLKTLNYKEIEKWHPWFVEKQIAGYSVRYENNILFATIKGAGH
Sbjct: 1 NAIGDHALLVPFSATLEWLKTLNYKEIEKWHPWFVEKQIAGYSVRYENNILFATIKGAGH 60
Query: 61 VPSDYLPFEVFVAYQRWIDGSDSL 84
VPSDYLPFEVFVAYQRWIDGSDSL
Sbjct: 61 VPSDYLPFEVFVAYQRWIDGSDSL 84
>Os10g0101100 Peptidase S10, serine carboxypeptidase family protein
Length = 460
Score = 91.7 bits (226), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 52/78 (66%)
Query: 4 GDHALLVPFSATLEWLKTLNYKEIEKWHPWFVEKQIAGYSVRYENNILFATIKGAGHVPS 63
GDH +++PF T W+++LN+ +++W PWFV+ Q+AGY Y NN+ FAT+KG GH
Sbjct: 381 GDHDMIIPFIGTQAWIRSLNFSVVDEWRPWFVDGQVAGYIRSYSNNLTFATVKGGGHTAP 440
Query: 64 DYLPFEVFVAYQRWIDGS 81
+Y+P + RW+ G+
Sbjct: 441 EYMPKQCLAMLARWVSGN 458
>Os11g0643400
Length = 462
Score = 86.7 bits (213), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 4 GDHALLVPFSATLEWLKTLNYKEIEKWHPWFVEKQIAGYSVRYENNILFATIKGAGHVPS 63
GDH + +PF T W+K+LN+ ++KW PWFV+ Q+ GY+ Y NN+ FAT+KG GH
Sbjct: 370 GDHDMAIPFIGTQAWIKSLNFSVVDKWRPWFVDGQVGGYTRSYSNNLTFATVKGGGHTAP 429
Query: 64 DYLP 67
+Y+P
Sbjct: 430 EYMP 433
>Os12g0257000 Serine carboxypeptidase I precursor (EC 3.4.16.5) (Carboxypeptidase
C)
Length = 510
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%)
Query: 4 GDHALLVPFSATLEWLKTLNYKEIEKWHPWFVEKQIAGYSVRYENNILFATIKGAGHVPS 63
GDH + VP++ T W ++L Y I+ W PW + Q++GY+ YE+ + FATIKGAGH
Sbjct: 431 GDHDMCVPYTGTEAWTRSLGYGVIDSWRPWHLNGQVSGYTQGYEHGLTFATIKGAGHTVP 490
Query: 64 DYLPFEVFVAYQRWIDGS 81
+Y P E Y RW+ GS
Sbjct: 491 EYKPQESLAFYSRWLAGS 508
>Os04g0321700 Similar to Serine carboxypeptidase I precursor (EC 3.4.16.5)
(Carboxypeptidase C)
Length = 504
Score = 82.4 bits (202), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%)
Query: 4 GDHALLVPFSATLEWLKTLNYKEIEKWHPWFVEKQIAGYSVRYENNILFATIKGAGHVPS 63
GDH L +P+ T W++++ Y+ I+ W PW+ Q+AGY+ YE+N+ F TIKGAGH
Sbjct: 425 GDHDLCIPYVGTEAWVRSMGYRVIDHWRPWYFGGQVAGYTQGYEHNLTFLTIKGAGHTVP 484
Query: 64 DYLPFEVFVAYQRWIDG 80
+Y P E Y W+ G
Sbjct: 485 EYKPKETLAFYSHWLSG 501
>Os04g0176400 Peptidase S10, serine carboxypeptidase family protein
Length = 467
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 4 GDHALLVPFSATLEWLKTLNYKEIEKWHPWFVEKQIAGYSVRYENNILFATIKGAGHVPS 63
GDH +V T WL++LN W PW+V Q+ G++ Y NN+ +AT+KGAGH
Sbjct: 388 GDHDSVVSLIGTQGWLRSLNLSITHGWRPWYVNSQVVGFTRTYSNNLTYATVKGAGHTAP 447
Query: 64 DYLPFEVFVAYQRWIDG 80
+Y+P E RW+ G
Sbjct: 448 EYMPKECLAMVDRWLSG 464
>Os10g0101200 Peptidase S10, serine carboxypeptidase family protein
Length = 472
Score = 78.6 bits (192), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 4 GDHALLVPFSATLEWLKTLNYKEIEKWHPWFVEKQIAGYSVRYENNILFATIKGAGHVPS 63
GDH L + F T +W++TL Y + W PW+ +Q+AG++ Y++N+ FAT+KG GH
Sbjct: 392 GDHDLDMTFVGTQQWIRTLGYNVVTAWRPWYSNRQVAGFTTVYDHNLTFATVKGGGHTAP 451
Query: 64 DYLPFEVFVAYQRWIDGSDSL 84
+Y P E RW + L
Sbjct: 452 EYRPKECLDMLDRWTSPAGEL 472
>Os11g0432900 Peptidase S10, serine carboxypeptidase family protein
Length = 479
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 4 GDHALLVPFSATLEWLKTLNYKEIEKWHPWFVEKQIAGYSVRYENNILFATIKGAGHVPS 63
GDH +VPF T W+++LNY ++ W W ++ Q AG+++ Y N++ FAT+KG GH
Sbjct: 400 GDHDSVVPFLGTQAWVRSLNYPIVDDWRAWHIDGQSAGFTITYANDLTFATVKGGGHTAP 459
Query: 64 DYLPFEVFVAYQRWI 78
+Y P + RWI
Sbjct: 460 EYQPERCLAMFGRWI 474
>Os12g0581400
Length = 453
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 4 GDHALLVPFSATLEWLKTLNYKEIEKWHPWFVEKQIAGYSVRYENNILFATIKGAGHVPS 63
GDH ++PF T W+++LN+ ++ W W V+ Q AG+++ Y NN+ FAT+KG H
Sbjct: 374 GDHDAMIPFLGTQAWVRSLNFSVVDDWRAWHVDGQSAGFTITYMNNMTFATVKGGSHTVP 433
Query: 64 DYLPFEVFVAYQRWI 78
++ P ++RWI
Sbjct: 434 EFEPERSLAMFKRWI 448
>Os11g0460800 Peptidase S10, serine carboxypeptidase family protein
Length = 483
Score = 73.9 bits (180), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 4 GDHALLVPFSATLEWLKTLNYKEIEKWHPWFVEKQIAGYSVRY-ENNILFATIKGAGHVP 62
GDH VP +T W++ LN + W PW+V+ Q+AG++ + NN+ +AT+KGAGH
Sbjct: 403 GDHDSRVPSISTQAWIRLLNLSIADDWRPWYVDGQVAGFTRSFASNNLTYATVKGAGHTA 462
Query: 63 SDYLPFEVFVAYQRWIDGS 81
++Y P E + RWI G+
Sbjct: 463 AEYKPKECQEMFARWISGT 481
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.138 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,039,379
Number of extensions: 98556
Number of successful extensions: 214
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 220
Number of HSP's successfully gapped: 11
Length of query: 84
Length of database: 17,035,801
Length adjustment: 54
Effective length of query: 30
Effective length of database: 14,216,245
Effective search space: 426487350
Effective search space used: 426487350
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 149 (62.0 bits)