Os10g0101100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S10, serine carboxypeptidase family protein.
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Os10g0101100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase S10, serine carboxypeptidase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.9 | 0.425 | 11 | 1.87 | 1.5 | 0.783 | 0.268 | 0.0872 | 0.19 | 9.22 | 19.99 | 4373 | -- | -- |
| 81.78 | 0.421 | 11 | 1.88 | 1.5 | 0.779 | 0.271 | -- | 0.185 | 9.22 | 19.79 | 4385 | -- | -- |
| 82.15 | 0.422 | 11 | 1.88 | 1.5 | 0.784 | -- | 0.0949 | 0.191 | 9.22 | 19.97 | 4389 | -- | -- |
| 82.03 | 0.422 | 11 | 1.89 | 1.5 | 0.786 | -- | -- | 0.191 | 9.22 | 19.74 | 4392 | -- | -- |
| 199 | 0.657 | 11.1 | 1.72 | -- | 0.948 | -- | 0.13 | 0.19 | -- | 25.01 | 3696 | -- | -- |
| 91.85 | 0.449 | 11.1 | 1.41 | 1.5 | -- | 0.323 | -- | -0.0129 | 9.26 | -- | -- | -- | -- |
| 92.22 | 0.45 | 11.1 | 1.42 | 1.49 | -- | -- | -- | -0.0126 | 9.26 | -- | -- | -- | -- |
| 198.69 | 0.657 | 11 | 1.76 | -- | 0.953 | -- | -- | 0.201 | -- | 25.04 | 3703 | -- | -- |
| 142.01 | 0.558 | 11.1 | -- | 1.5 | -0.22 | -- | -- | -0.245 | 8.73 | 25.7 | 3990 | -- | -- |
| 222.21 | 0.697 | 11.1 | 1.41 | -- | -- | -- | -- | -0.00587 | -- | -- | -- | -- | -- |
| 145.15 | 0.564 | 11.1 | -- | 1.5 | -- | -- | -- | -0.17 | 9.19 | -- | -- | -- | -- |
| 250.99 | 0.738 | 11.2 | -- | -- | -0.713 | -- | -- | -0.411 | -- | 22.1 | 47520 | -- | -- |
| 274.71 | 0.774 | 11.1 | -- | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.03 | temperature | 20.0 | 90 | > th | dose independent | rect. | 14 | 15 |
| 4 | 74.78 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 25 | 76.74 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 16 |
| 122 | 79.04 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 5 |
| 141 | 79.30 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 9 |
| 146 | 79.37 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 156 | 79.49 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 23 | 6 |
| 162 | 79.51 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 175 | 79.52 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 9 |
| 176 | 79.53 | temperature | 20.0 | 90 | < th | dose independent | rect. | 17 | 16 |
| 181 | 79.57 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 18 | 8 |
| 190 | 79.61 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 192 | 79.63 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 197 | 79.73 | wind | 7.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 205 | 79.81 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 218 | 79.90 | wind | 7.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 219 | 79.90 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 226 | 79.94 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 228 | 79.95 | wind | 7.0 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 230 | 79.96 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 231 | 79.97 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 237 | 80.00 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 239 | 80.01 | wind | 7.0 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 240 | 80.02 | temperature | 20.0 | 90 | > th | dose independent | sin | 12 | NA |
| 249 | 80.05 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 4 | 12 |
| 258 | 80.08 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 5 |
| 264 | 80.11 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 266 | 80.11 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 7 |
| 268 | 80.12 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 280 | 80.17 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 12 | 5 |
| 281 | 80.17 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 12 |
| 288 | 80.19 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 294 | 80.20 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 13 |
| 297 | 80.21 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 304 | 80.23 | temperature | 20.0 | 90 | < th | dose independent | sin | 12 | NA |
| 311 | 80.24 | temperature | 15.0 | 270 | > th | dose dependent | sin | 15 | NA |
| 321 | 80.26 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 3 |
| 331 | 80.27 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 20 | NA |
| 338 | 80.28 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 12 | 6 |
| 341 | 80.29 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 345 | 80.30 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 368 | 80.34 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 15 | 5 |
| 371 | 80.34 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 15 | 5 |
| 378 | 80.36 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 3 |
| 395 | 80.38 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 13 | 5 |
| 406 | 80.40 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 415 | 80.41 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 421 | 80.42 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 429 | 80.43 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 13 | 10 |
| 433 | 80.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 439 | 80.45 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 459 | 80.48 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 471 | 80.48 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 3 |
| 486 | 80.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 489 | 80.50 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 505 | 80.52 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 526 | 80.52 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 537 | 80.54 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 543 | 80.54 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 553 | 80.55 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 557 | 80.55 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 595 | 80.60 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 7 | 17 |
| 600 | 80.61 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 624 | 80.62 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 632 | 80.63 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 634 | 80.64 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 645 | 80.64 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 4 | 18 |
| 654 | 80.65 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 16 |
| 667 | 80.66 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 730 | 80.72 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 761 | 80.74 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 9 | 14 |
| 773 | 80.76 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 7 | 17 |
| 788 | 80.77 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 877 | 80.82 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 904 | 80.84 | wind | 9.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 908 | 80.84 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 7 | 8 |
| 913 | 80.84 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 918 | 80.84 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 23 | 15 |
| 920 | 80.85 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 14 | 13 |
| 933 | 80.86 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 934 | 80.86 | wind | 7.0 | 43200 | > th | dose dependent | sin | 6 | NA |
| 949 | 80.87 | temperature | 30.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 994 | 80.91 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 3 | 20 |