Os11g0460800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S10, serine carboxypeptidase family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0460800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase S10, serine carboxypeptidase family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 228.81 | 0.711 | 4.04 | -1.22 | 0.19 | 1.58 | 1.5 | -1.4 | -0.432 | 4.86 | 18.8 | 5660 | -- | -- |
| 230.68 | 0.707 | 4.07 | -1.25 | 0.212 | 2.07 | 1.53 | -- | -0.397 | 4.84 | 18.7 | 5660 | -- | -- |
| 234.17 | 0.713 | 4.03 | -1.14 | 0.234 | 1.65 | -- | -1.4 | -0.43 | 6.12 | 18.79 | 5660 | -- | -- |
| 236.02 | 0.716 | 4.08 | -1.31 | 0.211 | 2.03 | -- | -- | -0.448 | 6.32 | 18.8 | 5648 | -- | -- |
| 236.77 | 0.717 | 4.04 | -1.19 | -- | 1.59 | -- | -1.5 | -0.425 | -- | 18.8 | 5640 | -- | -- |
| 288.8 | 0.797 | 4.2 | -2.58 | 0.159 | -- | 1.65 | -- | -0.926 | 5 | -- | -- | -- | -- |
| 295.11 | 0.804 | 4.2 | -2.58 | 0.2 | -- | -- | -- | -0.933 | 6.95 | -- | -- | -- | -- |
| 238.73 | 0.72 | 4.09 | -1.29 | -- | 2.01 | -- | -- | -0.45 | -- | 18.77 | 5660 | -- | -- |
| 246.3 | 0.731 | 4.03 | -- | 0.164 | 2.75 | -- | -- | -0.201 | 8.21 | 18.43 | 14151 | -- | -- |
| 297.21 | 0.806 | 4.2 | -2.58 | -- | -- | -- | -- | -0.929 | -- | -- | -- | -- | -- |
| 470.46 | 1.01 | 4.13 | -- | 0.176 | -- | -- | -- | -0.646 | 7.87 | -- | -- | -- | -- |
| 246.33 | 0.731 | 4.03 | -- | -- | 2.82 | -- | -- | -0.188 | -- | 17.7 | 15638 | -- | -- |
| 472.14 | 1.01 | 4.14 | -- | -- | -- | -- | -- | -0.644 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 226.72 | wind | 7 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 7 | 227.41 | wind | 7 | 14400 | > th | dose dependent | rect. | 22 | 16 |
| 9 | 227.52 | wind | 7 | 14400 | > th | dose dependent | rect. | 6 | 6 |
| 15 | 227.80 | wind | 7 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 17 | 227.96 | wind | 7 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 20 | 228.00 | wind | 7 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 23 | 228.13 | wind | 7 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 26 | 228.21 | wind | 3 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 27 | 228.24 | humidity | 80 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 34 | 228.38 | wind | 7 | 14400 | > th | dose dependent | sin | 6 | NA |
| 39 | 228.56 | wind | 7 | 14400 | > th | dose independent | rect. | 23 | 15 |
| 41 | 228.57 | wind | 5 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 42 | 228.58 | wind | 7 | 14400 | > th | dose independent | rect. | 1 | 13 |
| 49 | 228.70 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 4 |
| 54 | 228.74 | wind | 1 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 64 | 228.86 | wind | 7 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 71 | 228.96 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 81 | 229.04 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 14 |
| 82 | 229.07 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 96 | 229.14 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 4 |
| 97 | 229.14 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 14 |
| 99 | 229.16 | temperature | 20 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 109 | 229.20 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 123 | 229.26 | wind | 7 | 43200 | < th | dose dependent | rect. | 6 | 7 |
| 135 | 229.31 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 136 | 229.32 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 6 |
| 142 | 229.33 | wind | 7 | 14400 | > th | dose independent | sin | 5 | NA |
| 166 | 229.39 | wind | 9 | 43200 | < th | dose dependent | sin | 3 | NA |
| 194 | 229.45 | wind | 1 | 43200 | > th | dose dependent | sin | 3 | NA |
| 208 | 229.47 | wind | 1 | 43200 | > th | dose dependent | rect. | 6 | 8 |
| 228 | 229.50 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 18 |
| 254 | 229.56 | wind | 7 | 14400 | < th | dose independent | sin | 5 | NA |
| 268 | 229.59 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 18 |
| 348 | 229.75 | wind | 3 | 43200 | < th | dose dependent | rect. | 19 | 18 |
| 365 | 229.79 | wind | 9 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 381 | 229.81 | wind | 5 | 43200 | < th | dose dependent | rect. | 6 | 22 |
| 390 | 229.83 | wind | 5 | 43200 | < th | dose dependent | rect. | 8 | 20 |
| 399 | 229.85 | temperature | 20 | 14400 | < th | dose independent | rect. | 15 | 7 |
| 402 | 229.85 | temperature | 25 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 416 | 229.86 | temperature | 20 | 14400 | < th | dose independent | rect. | 13 | 10 |
| 434 | 229.87 | temperature | 20 | 14400 | < th | dose dependent | rect. | 11 | 16 |
| 465 | 229.90 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 17 |
| 484 | 229.92 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 14 |
| 524 | 229.96 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 17 |
| 528 | 229.96 | temperature | 20 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 537 | 229.97 | wind | 3 | 43200 | > th | dose independent | sin | 2 | NA |
| 558 | 229.98 | wind | 5 | 43200 | < th | dose dependent | rect. | 16 | 22 |
| 562 | 229.99 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 17 |
| 563 | 229.99 | temperature | 20 | 14400 | < th | dose dependent | sin | 16 | NA |
| 564 | 229.99 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 575 | 229.99 | wind | 5 | 43200 | < th | dose dependent | rect. | 8 | 23 |
| 579 | 230.00 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 17 |
| 617 | 230.02 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 22 |
| 657 | 230.05 | temperature | 15 | 14400 | > th | dose independent | rect. | 6 | 8 |
| 714 | 230.08 | temperature | 20 | 14400 | < th | dose dependent | no | NA | NA |
| 742 | 230.09 | temperature | 20 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 744 | 230.09 | temperature | 20 | 14400 | < th | dose dependent | rect. | 13 | 23 |
| 745 | 230.09 | temperature | 20 | 14400 | < th | dose dependent | rect. | 18 | 23 |
| 768 | 230.10 | wind | 5 | 43200 | < th | dose dependent | rect. | 14 | 23 |
| 797 | 230.12 | wind | 3 | 43200 | < th | dose independent | sin | 2 | NA |
| 802 | 230.12 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 20 |
| 832 | 230.13 | wind | 5 | 43200 | < th | dose dependent | no | NA | NA |
| 840 | 230.13 | wind | 5 | 43200 | < th | dose dependent | rect. | 2 | 23 |
| 867 | 230.15 | temperature | 15 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 891 | 230.15 | wind | 1 | 43200 | > th | dose dependent | rect. | 16 | 22 |
| 956 | 230.19 | wind | 3 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 984 | 230.20 | wind | 5 | 43200 | < th | dose dependent | rect. | 6 | 14 |