Os12g0257000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Serine carboxypeptidase I precursor (EC 3.4.16.5) (Carboxypeptidase C).
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Os12g0257000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Serine carboxypeptidase I precursor (EC 3.4.16.5) (Carboxypeptidase C).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.21 | 0.413 | 10.7 | -2.06 | 0.635 | 1.53 | -0.432 | -4.12 | -0.382 | 15.2 | 27.82 | 437 | -- | -- |
| 78.62 | 0.413 | 10.6 | -1.68 | 0.669 | 1.14 | -0.549 | -- | -0.306 | 15.4 | 27.93 | 436 | -- | -- |
| 77.69 | 0.411 | 10.7 | -2.14 | 0.634 | 1.65 | -- | -5.29 | -0.377 | 15.3 | 28.06 | 417 | -- | -- |
| 79.52 | 0.415 | 10.6 | -1.69 | 0.685 | 1.04 | -- | -- | -0.333 | 15.3 | 27.68 | 453 | -- | -- |
| 93.47 | 0.45 | 10.7 | -2.22 | -- | 1.83 | -- | -4.07 | -0.485 | -- | 26.36 | 352 | -- | -- |
| 98.85 | 0.466 | 10.6 | -1.55 | 1.01 | -- | -0.13 | -- | -0.344 | 16.2 | -- | -- | -- | -- |
| 98.89 | 0.466 | 10.6 | -1.55 | 1.01 | -- | -- | -- | -0.345 | 16.3 | -- | -- | -- | -- |
| 97.12 | 0.459 | 10.6 | -1.8 | -- | 1.45 | -- | -- | -0.414 | -- | 25.99 | 348 | -- | -- |
| 152.49 | 0.575 | 10.6 | -- | 0.849 | 0.738 | -- | -- | -0.125 | 15.8 | 29.01 | 436 | -- | -- |
| 154.39 | 0.581 | 10.6 | -1.59 | -- | -- | -- | -- | -0.372 | -- | -- | -- | -- | -- |
| 162.52 | 0.596 | 10.6 | -- | 1.04 | -- | -- | -- | -0.172 | 16.2 | -- | -- | -- | -- |
| 180.63 | 0.626 | 10.6 | -- | -- | 1.24 | -- | -- | -0.19 | -- | 26.53 | 351 | -- | -- |
| 221.44 | 0.695 | 10.6 | -- | -- | -- | -- | -- | -0.195 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.60 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 7 |
| 4 | 70.40 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 14 | 4 |
| 13 | 71.29 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 17 |
| 15 | 71.38 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 16 |
| 19 | 71.44 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 36 | 72.52 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 54 | 73.19 | radiation | 1.0 | 270 | < th | dose independent | sin | 15 | NA |
| 59 | 73.31 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 18 |
| 61 | 73.37 | radiation | 1.0 | 270 | > th | dose independent | sin | 15 | NA |
| 74 | 73.63 | radiation | 1.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 76 | 73.70 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 11 |
| 92 | 73.92 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 12 | 20 |
| 98 | 73.99 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 15 |
| 102 | 74.09 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 136 | 74.71 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 5 |
| 146 | 74.84 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 147 | 74.84 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 18 |
| 205 | 75.43 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 207 | 75.45 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 18 |
| 217 | 75.52 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 245 | 75.57 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 248 | 75.58 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 14 | 4 |
| 302 | 75.96 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 4 |
| 344 | 76.29 | temperature | 30.0 | 270 | > th | dose independent | rect. | 13 | 20 |
| 359 | 76.39 | temperature | 25.0 | 270 | > th | dose dependent | sin | 17 | NA |
| 384 | 76.50 | temperature | 15.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 396 | 76.55 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 16 | 4 |
| 430 | 76.71 | temperature | 30.0 | 270 | > th | dose independent | sin | 15 | NA |
| 446 | 76.79 | humidity | 70.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 477 | 76.94 | temperature | 30.0 | 270 | < th | dose independent | sin | 15 | NA |
| 500 | 77.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 16 |
| 503 | 77.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 538 | 77.17 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 568 | 77.25 | temperature | 25.0 | 30 | > th | dose dependent | sin | 13 | NA |
| 572 | 77.26 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 23 |
| 582 | 77.29 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 22 |
| 614 | 77.41 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 17 |
| 617 | 77.41 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 17 |
| 621 | 77.43 | humidity | 70.0 | 90 | < th | dose independent | rect. | 16 | 3 |
| 625 | 77.44 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 18 |
| 682 | 77.69 | temperature | 25.0 | 10 | > th | dose independent | rect. | 16 | 4 |
| 719 | 77.82 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 16 | 4 |
| 754 | 77.91 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 16 | 2 |
| 757 | 77.91 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 773 | 77.96 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 16 |
| 775 | 77.96 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 799 | 78.06 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 14 | 4 |
| 821 | 78.16 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 851 | 78.24 | wind | 3.0 | 270 | > th | dose independent | rect. | 13 | 5 |
| 897 | 78.34 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 906 | 78.37 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 909 | 78.38 | humidity | 90.0 | 270 | < th | dose independent | rect. | 14 | 4 |
| 915 | 78.40 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 918 | 78.41 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 8 |
| 932 | 78.46 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 7 |
| 938 | 78.46 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 946 | 78.49 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 5 |
| 948 | 78.49 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 5 |
| 974 | 78.53 | humidity | 80.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 977 | 78.53 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 16 | 14 |