Os04g0176400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S10, serine carboxypeptidase family protein.
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Os04g0176400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase S10, serine carboxypeptidase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 278.25 | 0.784 | 4.97 | -4.16 | 0.593 | 2.76 | -0.279 | -7.71 | 0.0845 | 22.8 | 23.48 | 1274 | -- | -- |
| 308.8 | 0.818 | 4.75 | -2.27 | 0.604 | 3.08 | -0.545 | -- | 0.513 | 22.7 | 14.44 | 1246 | -- | -- |
| 278.47 | 0.777 | 4.97 | -4.15 | 0.572 | 2.76 | -- | -7.7 | 0.0727 | 22.8 | 23.36 | 1254 | -- | -- |
| 309.96 | 0.82 | 4.74 | -2.21 | 0.62 | 2.96 | -- | -- | 0.533 | 23 | 14.2 | 1245 | -- | -- |
| 289.99 | 0.793 | 4.95 | -4.08 | -- | 3.01 | -- | -7.85 | 0.0698 | -- | 23.18 | 1114 | -- | -- |
| 451.76 | 0.996 | 4.63 | -1.33 | 0.886 | -- | -0.426 | -- | 1.06 | 23.8 | -- | -- | -- | -- |
| 452.55 | 0.996 | 4.62 | -1.31 | 0.888 | -- | -- | -- | 1.06 | 23.9 | -- | -- | -- | -- |
| 322.62 | 0.837 | 4.73 | -2.25 | -- | 3.29 | -- | -- | 0.512 | -- | 12.03 | 1048 | -- | -- |
| 421.76 | 0.956 | 4.66 | -- | 0.641 | 2.04 | -- | -- | 0.916 | 23.2 | 8.35 | 1194 | -- | -- |
| 502.15 | 1.05 | 4.61 | -1.29 | -- | -- | -- | -- | 1.07 | -- | -- | -- | -- | -- |
| 497.94 | 1.04 | 4.59 | -- | 0.872 | -- | -- | -- | 1.21 | 23.8 | -- | -- | -- | -- |
| 422.46 | 0.957 | 4.63 | -- | -- | 1.89 | -- | -- | 0.973 | -- | 23.55 | 1069 | -- | -- |
| 545.76 | 1.09 | 4.57 | -- | -- | -- | -- | -- | 1.21 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 274.59 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 2 | 275.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 3 | 275.22 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 21 |
| 6 | 275.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 13 | 275.91 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 22 |
| 18 | 276.03 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 22 |
| 26 | 276.26 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 20 |
| 32 | 276.29 | wind | 5 | 43200 | > th | dose dependent | rect. | 2 | 18 |
| 34 | 276.30 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 55 | 276.51 | wind | 7 | 43200 | < th | dose independent | rect. | 23 | 22 |
| 62 | 276.59 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 11 |
| 77 | 276.72 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 22 |
| 84 | 276.77 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 16 |
| 98 | 276.84 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 129 | 277.10 | wind | 5 | 43200 | > th | dose dependent | sin | 23 | NA |
| 175 | 277.35 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 23 |
| 180 | 277.36 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 23 |
| 189 | 277.39 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 192 | 277.41 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 197 | 277.44 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 23 |
| 198 | 277.45 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 23 |
| 206 | 277.48 | wind | 7 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 215 | 277.50 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 228 | 277.56 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 244 | 277.64 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 23 |
| 249 | 277.67 | wind | 7 | 43200 | > th | dose independent | rect. | 4 | 23 |
| 267 | 277.75 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 19 |
| 270 | 277.78 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 288 | 277.87 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 306 | 277.95 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 356 | 278.27 | wind | 7 | 43200 | > th | dose independent | rect. | 8 | 23 |
| 469 | 279.03 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 539 | 279.62 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 566 | 279.87 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 15 |
| 782 | 281.73 | wind | 7 | 43200 | < th | dose independent | sin | 2 | NA |
| 803 | 281.89 | wind | 7 | 43200 | > th | dose independent | sin | 2 | NA |
| 878 | 282.37 | wind | 7 | 43200 | < th | dose independent | sin | 16 | NA |
| 894 | 282.45 | wind | 9 | 43200 | > th | dose independent | sin | 14 | NA |
| 944 | 282.76 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 8 |