BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0920500 Os01g0920500|AK107508
(148 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0920500 Conserved hypothetical protein 311 7e-86
Os07g0294800 Conserved hypothetical protein 146 4e-36
Os03g0849900 Conserved hypothetical protein 145 1e-35
Os01g0921100 Conserved hypothetical protein 139 6e-34
Os02g0686300 Conserved hypothetical protein 130 4e-31
Os01g0921000 Conserved hypothetical protein 125 1e-29
Os04g0585300 Conserved hypothetical protein 125 1e-29
Os08g0530100 Conserved hypothetical protein 121 2e-28
Os01g0920700 Conserved hypothetical protein 121 2e-28
Os03g0129350 Conserved hypothetical protein 119 1e-27
Os03g0731800 Conserved hypothetical protein 84 3e-17
>Os01g0920500 Conserved hypothetical protein
Length = 148
Score = 311 bits (798), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 148/148 (100%), Positives = 148/148 (100%)
Query: 1 MSMAAHMVTSSDFFVGGAYNPANFPNTGFLYVRSSRRAVGVMEAWRAARASYPGRHEQQV 60
MSMAAHMVTSSDFFVGGAYNPANFPNTGFLYVRSSRRAVGVMEAWRAARASYPGRHEQQV
Sbjct: 1 MSMAAHMVTSSDFFVGGAYNPANFPNTGFLYVRSSRRAVGVMEAWRAARASYPGRHEQQV 60
Query: 61 LNEIKRELVERRGVRIQFLDTAHVAGFCSNTRDFATLYTMHANCCVGLGAKLHDLRNLLE 120
LNEIKRELVERRGVRIQFLDTAHVAGFCSNTRDFATLYTMHANCCVGLGAKLHDLRNLLE
Sbjct: 61 LNEIKRELVERRGVRIQFLDTAHVAGFCSNTRDFATLYTMHANCCVGLGAKLHDLRNLLE 120
Query: 121 EWRAYRRMPDEQRRQGPVRWKVPGICIH 148
EWRAYRRMPDEQRRQGPVRWKVPGICIH
Sbjct: 121 EWRAYRRMPDEQRRQGPVRWKVPGICIH 148
>Os07g0294800 Conserved hypothetical protein
Length = 406
Score = 146 bits (369), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 97/152 (63%), Gaps = 8/152 (5%)
Query: 1 MSMAAHMVTSSDFFVGGAYNPANFPNTGFLYVRSSRRAVGVMEAWRAARASYPGRHEQQV 60
+S A +V SSDFFVG +P N+PN G LYVRSS V E W+++RA +PG+HEQ V
Sbjct: 259 LSPDAQVVMSSDFFVGDPTSPGNYPNGGLLYVRSSASTVRFYEHWQSSRARFPGKHEQFV 318
Query: 61 LNEIKRELVERR-GVRIQFLDTAHVAGFCSNTRDFATLYTMHANCCVGLGAKLHDLRNLL 119
+ I +E V G ++FLDT H GFC + +D + TMHANCCVGL KL DLRN+L
Sbjct: 319 FDRIVKEGVPPHVGATVRFLDTGHFGGFCQHGKDLGRVVTMHANCCVGLHNKLFDLRNVL 378
Query: 120 EEWRAYRRMPDEQRRQGPV---RWKVPGICIH 148
++W+ Y+ E+ G + W+VPG CIH
Sbjct: 379 DDWKTYK----ERVAAGNMDYFSWRVPGRCIH 406
>Os03g0849900 Conserved hypothetical protein
Length = 408
Score = 145 bits (366), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 100/148 (67%), Gaps = 2/148 (1%)
Query: 1 MSMAAHMVTSSDFFVGGAYNPANFPNTGFLYVRSSRRAVGVMEAWRAARASYPGRHEQQV 60
+++ A M SSD F G N NFPNTGF YV+ S R + + + W AR+S+PG +EQ V
Sbjct: 263 VAVYADMAISSDVFFGDPDNIDNFPNTGFFYVKPSARTIAMTKEWHEARSSHPGLNEQPV 322
Query: 61 LNEIKRELVERRGVRIQFLDTAHVAGFCSNTRDFATLYTMHANCCVGLGAKLHDLRNLLE 120
N IK++LV++ +++Q+LDTA++ GFCS +D + + TMHANCC+GL +K+ DL+ +L
Sbjct: 323 FNHIKKKLVKKLKLKVQYLDTAYIGGFCSYGKDLSKICTMHANCCIGLQSKISDLKGVLA 382
Query: 121 EWRAYRRMPDEQRRQGPVRWKVPGICIH 148
+W+ Y R+P + RW VPG CIH
Sbjct: 383 DWKNYTRLPPWAKPNA--RWTVPGKCIH 408
>Os01g0921100 Conserved hypothetical protein
Length = 389
Score = 139 bits (351), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 94/155 (60%), Gaps = 7/155 (4%)
Query: 1 MSMAAHMVTSSDFFVGGAYNPANFPNTGFLYVRSSRRAVGVMEAWRAARASYPGRHEQQV 60
++ AA + TSSDF+ G + N+PNTGF+Y +++ R M W AAR +PG H+Q V
Sbjct: 235 ITAAADITTSSDFYFGDPDDLGNYPNTGFIYFKATPRNARAMAYWHAARRRFPGEHDQFV 294
Query: 61 LNEIKRELVERRGV------RIQFLDTAHVAGFCSNTRDFATLYTMHANCCVGLGAKLHD 114
NEIKREL G RI+F+DTA V+GFC RD + T+H CC+GL KLHD
Sbjct: 295 FNEIKRELAAGAGEGGGVGVRIRFIDTAAVSGFCQLGRDLNRIATVHMTCCIGLENKLHD 354
Query: 115 LRNLLEEWRAYRRMPDEQRRQGPVRWKVP-GICIH 148
LRN++ +WR Y P +R+ G + W G CIH
Sbjct: 355 LRNVIRDWRRYVARPRWERQMGKIGWTFEGGKCIH 389
>Os02g0686300 Conserved hypothetical protein
Length = 393
Score = 130 bits (326), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
Query: 12 DFFVGGAYNPANFPNTGFLYVRSSRRAVGVMEAWRAARASYPGRHEQQVLNEIKRE-LVE 70
D +VG A + N N GF YVRS+ +++ + W ++R YPG H+Q V N IK + +
Sbjct: 251 DHYVGNATDLGNIANGGFNYVRSNNQSIEFYKFWYSSRLRYPGYHDQDVFNFIKHDPYIT 310
Query: 71 RRGVRIQFLDTAHVAGFCSNTRDFATLYTMHANCCVGLGAKLHDLRNLLEEWRAYRRMPD 130
G++I+FL T + G C +RD + TMHANCC+GL +KLHDLR ++E+WR Y MP
Sbjct: 311 DIGLKIKFLSTTYFGGICEPSRDLNKVCTMHANCCIGLQSKLHDLRVIMEDWRNYMSMPP 370
Query: 131 EQRRQGPVRWKVPGIC 146
+R G + W VP C
Sbjct: 371 SLKRFGALSWGVPQNC 386
>Os01g0921000 Conserved hypothetical protein
Length = 372
Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 1 MSMAAHMVTSSDFFVGGAYNPANFP-NTGFLYVRSSRRAVGVMEAWRAARASYPGRHEQQ 59
+++ A M TSSD + A P + P NTG YV+++ ++V ++ W+AAR +PG H+Q
Sbjct: 215 IAVYADMSTSSDDY-SAARAPLDNPLNTGLYYVKATSQSVEMLRYWQAARPRFPGAHDQA 273
Query: 60 VLNEIKRELVERRGVRIQFLDTAHVAGFCSNTRDFATLYTMHANCCVGLGAKLHDLRNLL 119
V IK ELV + RI+ LDT + GFC D A TMHA+CCVGL K+HDL ++
Sbjct: 274 VFGHIKHELVAKLRARIEPLDTLYFGGFCEYHDDLARAVTMHADCCVGLDTKVHDLTDIA 333
Query: 120 EEWRAYRRMPDEQRRQGPVRWKVPGIC 146
+W+ Y M E+R++G +W P C
Sbjct: 334 ADWKNYTGMSPEERKKGGFKWTYPTRC 360
>Os04g0585300 Conserved hypothetical protein
Length = 362
Score = 125 bits (313), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
Query: 12 DFFVGGAYNPANFPNTGFLYVRSSRRAVGVMEAWRAARASYPGRHEQQVLNEIKRE-LVE 70
D + G A + N N GF YV+S+ R++ W ++R YPG H+Q V N IK + V
Sbjct: 220 DHYFGNATDLRNIANGGFNYVKSNERSIEFYSFWYSSRLRYPGLHDQDVFNVIKHDPYVS 279
Query: 71 RRGVRIQFLDTAHVAGFCSNTRDFATLYTMHANCCVGLGAKLHDLRNLLEEWRAYRRMPD 130
G++I+FL T++ GFC +RD + TMHANCC+GL +K+ DLR ++E+WR+Y +P
Sbjct: 280 DIGLKIKFLSTSYFGGFCEPSRDLNKVCTMHANCCIGLQSKVPDLRVMMEDWRSYLSLPP 339
Query: 131 EQRRQGPVRWKVPGIC 146
+R + W+VP C
Sbjct: 340 SLKRLSALAWRVPQNC 355
>Os08g0530100 Conserved hypothetical protein
Length = 126
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 77/124 (62%), Gaps = 1/124 (0%)
Query: 25 PNTGFLYVRSSRRAVGVMEAWRAARASYP-GRHEQQVLNEIKRELVERRGVRIQFLDTAH 83
PN GFLYVR++RR V WR AR +P G +EQ VL + EL R VR+QFLDTAH
Sbjct: 2 PNGGFLYVRAARRTVDFYRRWRDARRRFPPGTNEQHVLERAQAELSRRADVRMQFLDTAH 61
Query: 84 VAGFCSNTRDFATLYTMHANCCVGLGAKLHDLRNLLEEWRAYRRMPDEQRRQGPVRWKVP 143
GFC +RD A + T+HANCC GL K+HDL +L +WR Y P RR+G W P
Sbjct: 62 CGGFCQLSRDMARVCTLHANCCTGLANKVHDLAAVLRDWRNYTAAPPAARRRGGFGWTTP 121
Query: 144 GICI 147
G CI
Sbjct: 122 GKCI 125
>Os01g0920700 Conserved hypothetical protein
Length = 369
Score = 121 bits (303), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 89/156 (57%), Gaps = 10/156 (6%)
Query: 1 MSMAAHMVTSSDFFVGGAYNPANFPNTGFLYVRSSRRAVGVMEAWRAARASYPGRHEQQV 60
+ + A M TS D F G + +N+PNTGF +V+S+ R V ++ WRAARA YP HEQ +
Sbjct: 207 IGVYADMTTSCDVFNGDGDDLSNWPNTGFYHVKSTNRTVEMLRRWRAARARYPPNHEQNI 266
Query: 61 LNEIKRELVERRGVRIQFLDTAHVAGFCSNTR-DFATLYTMHANCCVGLGAKLHDLRNLL 119
N IK EL GVR++FLDTA GFC R D A TMHANCCVGLG KLHDLR+ L
Sbjct: 267 FNYIKHELAAGLGVRVRFLDTAVFGGFCQLFRNDMARACTMHANCCVGLGNKLHDLRSAL 326
Query: 120 EEWRAYRR-MPDE--------QRRQGPVRWKVPGIC 146
++W Y P E W VP C
Sbjct: 327 DQWANYTSPAPPEGRKKKSGGGGGDRRAGWSVPAKC 362
>Os03g0129350 Conserved hypothetical protein
Length = 383
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 10 SSDFFVGGAYNPANFPNTGFLYVRSSRRAVGVMEAWRAARASYPGRHEQQVLNEIKRE-L 68
+ D F G + +N PN GF YVRS+ W AAR +PG H+Q VLN IKR+
Sbjct: 218 ACDHFTGDPDDLSNSPNGGFAYVRSTSATAAFYRYWYAARERHPGLHDQDVLNLIKRDAY 277
Query: 69 VERRGVRIQFLDTAHVAGFCSNTRDFATLYTMHANCCVGLGAKLHDLRNLLEEWRAYRRM 128
V R GVRI+FL T AG C + R+ +T+ TMHANCCVGL K+ DL +L++WR +
Sbjct: 278 VARLGVRIRFLSTDLFAGLCEHGRNLSTVCTMHANCCVGLRRKVDDLGLMLQDWRRFMAT 337
Query: 129 PDEQRRQGPVRWKVPGIC 146
P R V W VP C
Sbjct: 338 PGSDRHS--VTWSVPRNC 353
>Os03g0731800 Conserved hypothetical protein
Length = 351
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 6 HMVTSSDFFVGGAYNPA-NFPNTGFLYVRSSRRAVGVMEAWRAARASYPGRHEQQVLNEI 64
++ SSD F G + A N NTGF +V S+ R + + W AAR G EQ VLN++
Sbjct: 207 DLLISSDQFNGRPGDIAGNELNTGFFFVASNNRTAALFDEWHAARDRSAGMKEQDVLNDM 266
Query: 65 KRELVERR-GVRIQFLDTAHVAGFCSNTRDFATLYTMHANCCVGLGAK 111
KR RR GVR + LDTA +GFC ++RD + T+HANCC + AK
Sbjct: 267 KRRGALRRLGVRARVLDTARFSGFCQDSRDAREVATVHANCCRTMRAK 314
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.137 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,264,849
Number of extensions: 191683
Number of successful extensions: 725
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 715
Number of HSP's successfully gapped: 11
Length of query: 148
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 56
Effective length of database: 12,232,113
Effective search space: 684998328
Effective search space used: 684998328
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 151 (62.8 bits)