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Os07g0294800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0146) R2 : 0.636
β1 : -0.772 (0.0533) R2dD : 0.173 R2D : 0.113
β2 : 0.89 (0.0367) R2dC : 0.47 R2C : 0.435
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.24 (0.0311) R2dN8 : 0.0638 R2N8 : 0.00595
σ : 0.274
deviance : 34.2
__
_____
C
peak time of C : 3.58
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.6 0.238 10.4 -0.939 0.927 0.89 -0.0324 2.05 -0.184 3.29 0.8312 14256 -- --
28.93 0.25 10.3 -0.675 0.901 0.729 -0.0508 -- -0.101 2.57 3.973 8312 -- --
25.53 0.235 10.4 -0.926 0.92 0.916 -- 2.09 -0.177 3.14 0.8228 14161 -- --
27.25 0.243 10.3 -0.616 0.911 0.547 -- -- -0.0566 3.04 4.003 15587 -- --
56.41 0.35 10.4 -0.964 -- 1.03 -- 1.94 -0.115 -- 1.821 13496 -- --
34.15 0.274 10.3 -0.774 0.891 -- -0.126 -- -0.241 3.57 -- -- -- --
34.2 0.274 10.3 -0.772 0.89 -- -- -- -0.24 3.58 -- -- -- --
38.29 0.288 10.3 -0.547 -- 1.33 -- -- -0.0118 -- 3.351 4808 -- --
26.22 0.238 10.3 -- 0.921 0.763 -- -- 0.0471 3.64 0.05687 47520 -- --
78.35 0.414 10.3 -0.734 -- -- -- -- -0.216 -- -- -- -- --
49.88 0.33 10.3 -- 0.875 -- -- -- -0.154 3.59 -- -- -- --
45.28 0.313 10.3 -- -- 1.46 -- -- 0.0528 -- 2.578 4806 -- --
92.57 0.449 10.3 -- -- -- -- -- -0.135 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.51 humidity 90.0 14400 > th dose dependent rect. 1 16
9 23.63 humidity 90.0 14400 > th dose dependent rect. 5 3
16 23.71 humidity 90.0 14400 > th dose dependent rect. 1 7
17 23.72 humidity 90.0 14400 > th dose dependent rect. 1 9
28 23.76 humidity 90.0 14400 > th dose dependent sin 3 NA
37 23.79 radiation 1.0 14400 < th dose dependent rect. 23 6
75 23.95 humidity 90.0 14400 > th dose dependent rect. 6 1
135 24.25 humidity 90.0 14400 > th dose dependent rect. 24 3
141 24.30 radiation 1.0 43200 < th dose dependent rect. 4 1
147 24.33 humidity 90.0 14400 > th dose independent rect. 6 1
150 24.35 humidity 90.0 14400 > th dose independent rect. 1 7
155 24.37 humidity 80.0 43200 > th dose independent rect. 12 3
170 24.41 temperature 25.0 14400 > th dose independent rect. 24 13
172 24.41 humidity 90.0 14400 > th dose independent rect. 24 16
173 24.41 radiation 1.0 14400 < th dose dependent rect. 18 8
188 24.45 humidity 90.0 14400 > th dose independent rect. 22 10
204 24.48 atmosphere 1005.0 43200 > th dose independent rect. 18 2
229 24.52 temperature 25.0 14400 < th dose independent rect. 24 13
236 24.53 radiation 1.0 14400 < th dose dependent rect. 18 2
240 24.54 atmosphere 1005.0 43200 < th dose independent rect. 18 1
241 24.54 temperature 25.0 14400 < th dose independent rect. 1 11
251 24.56 temperature 25.0 14400 < th dose independent rect. 11 1
252 24.56 humidity 90.0 43200 > th dose independent rect. 9 1
256 24.57 temperature 25.0 14400 > th dose independent rect. 11 1
268 24.58 humidity 90.0 43200 < th dose independent rect. 9 1
269 24.58 humidity 80.0 43200 < th dose independent rect. 14 1
288 24.60 temperature 25.0 14400 > th dose dependent rect. 2 1
291 24.60 humidity 90.0 14400 > th dose dependent rect. 12 19
313 24.62 humidity 90.0 14400 > th dose dependent rect. 14 17
316 24.63 temperature 25.0 14400 > th dose independent sin 5 NA
318 24.63 atmosphere 1005.0 43200 > th dose independent rect. 16 1
343 24.66 humidity 90.0 14400 < th dose independent rect. 24 17
346 24.67 atmosphere 1005.0 43200 > th dose independent rect. 16 4
364 24.68 humidity 80.0 43200 > th dose dependent rect. 10 1
398 24.73 humidity 90.0 14400 > th dose independent rect. 22 6
405 24.74 temperature 25.0 14400 < th dose independent sin 4 NA
422 24.75 atmosphere 1005.0 43200 > th dose independent rect. 11 9
430 24.76 radiation 1.0 14400 < th dose independent rect. 18 1
431 24.76 atmosphere 1005.0 43200 > th dose independent rect. 13 7
460 24.78 atmosphere 1005.0 43200 < th dose independent rect. 16 5
466 24.78 atmosphere 1005.0 43200 < th dose independent rect. 15 8
474 24.78 humidity 80.0 43200 > th dose dependent rect. 9 6
480 24.79 wind 3.0 43200 < th dose independent rect. 8 1
494 24.80 humidity 90.0 14400 > th dose independent sin 7 NA
506 24.81 radiation 1.0 14400 > th dose independent rect. 18 1
510 24.81 atmosphere 1005.0 43200 < th dose independent rect. 13 4
517 24.81 atmosphere 1005.0 43200 < th dose independent rect. 13 7
519 24.81 atmosphere 1005.0 43200 < th dose independent rect. 11 8
521 24.81 atmosphere 1005.0 43200 < th dose independent rect. 13 9
542 24.83 atmosphere 1005.0 43200 > th dose independent rect. 13 4
558 24.84 wind 3.0 43200 > th dose independent rect. 8 1
576 24.84 wind 1.0 43200 < th dose dependent rect. 11 20
605 24.86 humidity 90.0 14400 < th dose independent rect. 24 9
645 24.88 wind 1.0 43200 < th dose dependent rect. 12 18
684 24.90 humidity 90.0 14400 > th dose dependent no NA NA
685 24.90 temperature 30.0 14400 < th dose dependent rect. 11 1
688 24.90 wind 1.0 43200 < th dose dependent rect. 17 19
707 24.91 humidity 90.0 14400 > th dose dependent rect. 14 23
730 24.93 temperature 25.0 14400 > th dose independent rect. 2 3
731 24.93 temperature 25.0 14400 > th dose independent rect. 8 4
741 24.93 temperature 25.0 14400 > th dose dependent rect. 1 4
770 24.95 temperature 25.0 14400 > th dose independent rect. 2 1
771 24.95 temperature 25.0 14400 > th dose independent rect. 8 1
788 24.96 temperature 25.0 14400 < th dose independent rect. 7 5
802 24.96 temperature 10.0 14400 > th dose dependent rect. 11 1
836 24.99 atmosphere 1005.0 43200 < th dose independent rect. 13 1
866 25.01 wind 3.0 43200 < th dose dependent rect. 3 1
867 25.01 humidity 90.0 14400 > th dose dependent rect. 5 23
917 25.05 temperature 25.0 14400 < th dose dependent rect. 6 2
918 25.05 temperature 30.0 14400 < th dose dependent rect. 5 7
951 25.07 temperature 25.0 14400 > th dose independent rect. 8 22
954 25.07 precipitation 0.1 43200 > th dose dependent rect. 4 2
978 25.09 temperature 25.0 14400 > th dose independent rect. 10 20
981 25.09 temperature 25.0 14400 > th dose independent rect. 10 23
990 25.10 atmosphere 1005.0 43200 < th dose independent sin 18 NA
994 25.10 humidity 90.0 14400 < th dose independent rect. 21 7