Os08g0530100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0530100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 260.74 | 0.759 | 8.16 | -2.27 | 1.56 | -1.12 | 2.42 | -4.82 | 0.0651 | 20.3 | 78 | 1392 | -- | -- |
| 279.5 | 0.779 | 8.13 | -1.83 | 1.85 | -1.08 | 2.7 | -- | 0.173 | 19.7 | 75.32 | 1839 | -- | -- |
| 278.59 | 0.777 | 8.16 | -2.31 | 1.56 | -1.12 | -- | -4.85 | 0.0726 | 20.4 | 78 | 1407 | -- | -- |
| 299.81 | 0.806 | 8.12 | -1.9 | 1.82 | -1.07 | -- | -- | 0.195 | 19.8 | 75.26 | 1830 | -- | -- |
| 412.7 | 0.946 | 8.11 | -2.35 | -- | -1.27 | -- | -4.87 | 0.0571 | -- | 78 | 1403 | -- | -- |
| 305.92 | 0.82 | 8.14 | -1.94 | 1.59 | -- | 2.63 | -- | 0.0935 | 20 | -- | -- | -- | -- |
| 326.12 | 0.846 | 8.14 | -2.01 | 1.58 | -- | -- | -- | 0.0935 | 20.2 | -- | -- | -- | -- |
| 433.19 | 0.969 | 8.09 | -1.94 | -- | -1.55 | -- | -- | 0.142 | -- | 78 | 1414 | -- | -- |
| 385.33 | 0.914 | 8.05 | -- | 1.78 | -1.35 | -- | -- | 0.409 | 19.7 | 69.51 | 1769 | -- | -- |
| 464.94 | 1.01 | 8.09 | -2.03 | -- | -- | -- | -- | 0.0756 | -- | -- | -- | -- | -- |
| 433.02 | 0.973 | 8.08 | -- | 1.6 | -- | -- | -- | 0.318 | 20.1 | -- | -- | -- | -- |
| 522.74 | 1.06 | 8.02 | -- | -- | -1.01 | -- | -- | 0.35 | -- | 70 | 1441 | -- | -- |
| 573.14 | 1.12 | 8.04 | -- | -- | -- | -- | -- | 0.3 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 242.34 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 3 | 242.80 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 5 | 243.64 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 18 | 244.85 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 21 | 245.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 22 | 245.11 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 42 | 245.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 44 | 245.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 46 | 245.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 51 | 246.46 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 6 |
| 57 | 246.73 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 59 | 246.74 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 92 | 247.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 101 | 247.37 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 114 | 247.94 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 173 | 249.05 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 186 | 249.21 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 202 | 249.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 203 | 249.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 254 | 250.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 256 | 250.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 274 | 250.64 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 275 | 250.65 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 335 | 251.38 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 447 | 252.46 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 451 | 252.51 | humidity | 80.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 474 | 252.79 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 527 | 253.27 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 575 | 253.77 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 22 | 16 |
| 592 | 253.86 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 609 | 253.98 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 657 | 254.22 | humidity | 80.0 | 14400 | < th | dose independent | sin | 23 | NA |
| 694 | 254.43 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 23 | 16 |
| 695 | 254.44 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 872 | 255.29 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 874 | 255.30 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 6 | NA |
| 934 | 255.53 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 939 | 255.54 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 14 |
| 946 | 255.57 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 12 |
| 964 | 255.64 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 992 | 255.75 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 8 |