Os02g0686300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0686300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121.98 | 0.519 | 5.66 | 0.0186 | 1.01 | 0.531 | -0.142 | 0.916 | 0.572 | 4.28 | 1010 | 3581 | -- | -- |
| 124.31 | 0.519 | 5.67 | -0.12 | 1 | 0.482 | -0.0139 | -- | 0.575 | 4.27 | 1010 | 4019 | -- | -- |
| 122.02 | 0.514 | 5.66 | 0.0133 | 1.01 | 0.534 | -- | 0.916 | 0.588 | 4.27 | 1010 | 3603 | -- | -- |
| 124.18 | 0.519 | 5.68 | -0.18 | 1.02 | 0.498 | -- | -- | 0.555 | 4.29 | 1010 | 4031 | -- | -- |
| 173.28 | 0.613 | 5.64 | -0.0603 | -- | 0.715 | -- | 0.848 | 0.752 | -- | 1009 | 2615 | -- | -- |
| 132.12 | 0.539 | 5.68 | -0.0265 | 1.05 | -- | -0.000712 | -- | 0.55 | 4.29 | -- | -- | -- | -- |
| 132.12 | 0.538 | 5.68 | -0.0265 | 1.05 | -- | -- | -- | 0.55 | 4.29 | -- | -- | -- | -- |
| 174.99 | 0.616 | 5.64 | -0.178 | -- | 0.7 | -- | -- | 0.781 | -- | 1009 | 2588 | -- | -- |
| 124.98 | 0.521 | 5.68 | -- | 1.03 | 0.456 | -- | -- | 0.569 | 4.3 | 1010 | 3995 | -- | -- |
| 191.73 | 0.647 | 5.69 | 0.0154 | -- | -- | -- | -- | 0.578 | -- | -- | -- | -- | -- |
| 132.13 | 0.538 | 5.68 | -- | 1.05 | -- | -- | -- | 0.553 | 4.29 | -- | -- | -- | -- |
| 175.77 | 0.617 | 5.64 | -- | -- | 0.664 | -- | -- | 0.789 | -- | 1009 | 2588 | -- | -- |
| 191.74 | 0.646 | 5.69 | -- | -- | -- | -- | -- | 0.576 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.59 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 2 | 120.74 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 15 | 22 |
| 24 | 120.93 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 6 |
| 83 | 121.03 | humidity | 50.0 | 14400 | < th | dose dependent | sin | 20 | NA |
| 90 | 121.04 | humidity | 50.0 | 14400 | < th | dose dependent | no | NA | NA |
| 277 | 121.15 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 297 | 121.31 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 330 | 121.78 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 331 | 121.79 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 10 | 17 |
| 332 | 121.80 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 333 | 121.80 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 334 | 121.81 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 336 | 121.82 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 355 | 121.85 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 362 | 121.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 363 | 121.91 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 367 | 121.95 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 368 | 121.96 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 375 | 122.00 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 396 | 122.02 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 11 | 22 |
| 422 | 122.04 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 15 | 9 |
| 423 | 122.05 | humidity | 50.0 | 14400 | < th | dose independent | sin | 23 | NA |
| 425 | 122.05 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 451 | 122.06 | temperature | 10.0 | 10 | > th | dose dependent | sin | 9 | NA |
| 491 | 122.10 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 494 | 122.11 | humidity | 50.0 | 14400 | < th | dose independent | no | NA | NA |
| 627 | 122.13 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 639 | 122.15 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 645 | 122.16 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 653 | 122.16 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 23 | 17 |
| 658 | 122.16 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 680 | 122.18 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 10 | 20 |
| 684 | 122.19 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 17 | 20 |
| 707 | 122.21 | humidity | 50.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 719 | 122.23 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 721 | 122.23 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 9 |
| 726 | 122.24 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 10 | 14 |
| 727 | 122.24 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 735 | 122.25 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 742 | 122.25 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 4 | 16 |
| 744 | 122.25 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 10 | 16 |
| 750 | 122.25 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 1 | 19 |
| 754 | 122.25 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 10 | 19 |
| 758 | 122.25 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 1 | 21 |
| 761 | 122.25 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 1 | 23 |
| 762 | 122.25 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 765 | 122.26 | humidity | 50.0 | 14400 | > th | dose independent | no | NA | NA |
| 767 | 122.26 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 826 | 122.26 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 8 | 21 |
| 828 | 122.26 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 23 | 21 |
| 945 | 122.33 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 8 | 1 |