Os03g0849900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0849900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 135.97 | 0.548 | 2.91 | -0.0447 | 0.387 | 0.489 | -0.0358 | -0.329 | 0.206 | 11.9 | 36.08 | 274 | -- | -- |
| 136.1 | 0.543 | 2.91 | -0.064 | 0.361 | 0.488 | 0.126 | -- | 0.2 | 11.6 | 70 | 263 | -- | -- |
| 135.97 | 0.543 | 2.9 | -0.042 | 0.387 | 0.489 | -- | -0.301 | 0.208 | 11.9 | 35.67 | 277 | -- | -- |
| 136.17 | 0.543 | 2.91 | -0.0596 | 0.358 | 0.49 | -- | -- | 0.202 | 11.6 | 144.3 | 263 | -- | -- |
| 138.8 | 0.549 | 2.91 | -0.0482 | -- | 0.321 | -- | -0.2 | 0.207 | -- | 50.48 | 638 | -- | -- |
| 139.04 | 0.553 | 2.91 | -0.0811 | 0.244 | -- | 0.142 | -- | 0.168 | 7.68 | -- | -- | -- | -- |
| 139.1 | 0.552 | 2.91 | -0.0777 | 0.245 | -- | -- | -- | 0.168 | 7.61 | -- | -- | -- | -- |
| 138.85 | 0.549 | 2.91 | -0.0605 | -- | 0.313 | -- | -- | 0.198 | -- | 70 | 638 | -- | -- |
| 136.26 | 0.544 | 2.91 | -- | 0.35 | 0.491 | -- | -- | 0.206 | 11.7 | 194.6 | 278 | -- | -- |
| 142.31 | 0.557 | 2.92 | -0.0743 | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
| 139.26 | 0.552 | 2.91 | -- | 0.244 | -- | -- | -- | 0.176 | 7.63 | -- | -- | -- | -- |
| 138.95 | 0.549 | 2.91 | -- | -- | 0.315 | -- | -- | 0.205 | -- | 70.02 | 638 | -- | -- |
| 142.46 | 0.557 | 2.92 | -- | -- | -- | -- | -- | 0.179 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 122.12 | wind | 1.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 2 | 124.15 | wind | 1.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 3 | 126.56 | wind | 1.0 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 6 | 128.71 | wind | 1.0 | 90 | < th | dose independent | rect. | 8 | 3 |
| 12 | 130.17 | humidity | 80.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 15 | 130.55 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 22 | 131.32 | radiation | 10.0 | 90 | < th | dose independent | rect. | 9 | 2 |
| 27 | 131.54 | radiation | 10.0 | 90 | < th | dose independent | rect. | 8 | 5 |
| 35 | 132.14 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 1 |
| 36 | 132.14 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 39 | 132.47 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 8 | 2 |
| 61 | 133.12 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 9 | 4 |
| 81 | 133.47 | humidity | 80.0 | 10 | > th | dose independent | rect. | 10 | 3 |
| 83 | 133.55 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 85 | 133.60 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 19 | 18 |
| 89 | 133.64 | radiation | 30.0 | 90 | < th | dose independent | rect. | 9 | 4 |
| 104 | 133.86 | radiation | 30.0 | 270 | < th | dose independent | rect. | 23 | 13 |
| 108 | 133.92 | wind | 1.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 113 | 133.95 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 7 | 22 |
| 118 | 133.99 | radiation | 30.0 | 90 | < th | dose independent | rect. | 9 | 6 |
| 122 | 134.02 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 19 | 20 |
| 131 | 134.07 | humidity | 80.0 | 90 | > th | dose independent | rect. | 9 | 4 |
| 132 | 134.07 | radiation | 30.0 | 90 | < th | dose independent | rect. | 19 | 17 |
| 142 | 134.13 | radiation | 30.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 156 | 134.17 | wind | 1.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 162 | 134.20 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 8 | 2 |
| 176 | 134.26 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 177 | 134.26 | radiation | 20.0 | 270 | < th | dose independent | rect. | 7 | 22 |
| 181 | 134.27 | temperature | 25.0 | 270 | > th | dose independent | rect. | 24 | 1 |
| 201 | 134.34 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 19 | 22 |
| 223 | 134.44 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 24 | 10 |
| 227 | 134.46 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 232 | 134.47 | radiation | 30.0 | 90 | < th | dose independent | rect. | 19 | 20 |
| 254 | 134.54 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 290 | 134.63 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 3 |
| 293 | 134.64 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 5 |
| 403 | 134.93 | radiation | 10.0 | 720 | < th | dose independent | rect. | 24 | 9 |
| 408 | 134.94 | temperature | 25.0 | 270 | > th | dose independent | sin | 10 | NA |
| 479 | 135.06 | radiation | 40.0 | 90 | < th | dose independent | rect. | 9 | 12 |
| 507 | 135.11 | radiation | 30.0 | 30 | < th | dose independent | rect. | 2 | 11 |
| 516 | 135.12 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 542 | 135.16 | wind | 3.0 | 10 | < th | dose dependent | rect. | 11 | 2 |
| 556 | 135.17 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 22 | 14 |
| 617 | 135.26 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 623 | 135.27 | radiation | 10.0 | 720 | > th | dose independent | rect. | 6 | 3 |
| 694 | 135.33 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 7 |
| 722 | 135.36 | temperature | 25.0 | 270 | > th | dose independent | rect. | 20 | 14 |
| 755 | 135.40 | radiation | 20.0 | 270 | > th | dose independent | rect. | 14 | 20 |
| 764 | 135.40 | radiation | 10.0 | 270 | > th | dose dependent | rect. | 14 | 21 |
| 803 | 135.45 | humidity | 80.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 804 | 135.45 | radiation | 20.0 | 270 | > th | dose independent | rect. | 13 | 22 |
| 835 | 135.48 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 6 |
| 865 | 135.51 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 952 | 135.57 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 962 | 135.58 | humidity | 80.0 | 90 | > th | dose independent | rect. | 19 | 18 |