BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0894300 Os01g0894300|AK060500
(323 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0894300 Similar to Fructokinase 1 627 e-180
Os08g0113100 Similar to Fructokinase (Fragment) 416 e-117
Os06g0232200 Ribokinase family protein 386 e-107
Os01g0851000 PfkB domain containing protein 175 4e-44
Os03g0602600 PfkB domain containing protein 84 9e-17
Os01g0665400 Ribokinase family protein 71 1e-12
>Os01g0894300 Similar to Fructokinase 1
Length = 323
Score = 627 bits (1617), Expect = e-180, Method: Compositional matrix adjust.
Identities = 313/323 (96%), Positives = 313/323 (96%)
Query: 1 MAGRSELVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGK 60
MAGRSELVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGK
Sbjct: 1 MAGRSELVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGK 60
Query: 61 LGDDEFGRMLAAILRXXXXXXXXXXFDAGARTALAFVTLRADGEREFMFYRNPSADMLLT 120
LGDDEFGRMLAAILR FDAGARTALAFVTLRADGEREFMFYRNPSADMLLT
Sbjct: 61 LGDDEFGRMLAAILRDNGVDDGGVVFDAGARTALAFVTLRADGEREFMFYRNPSADMLLT 120
Query: 121 HAELNVELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSRE 180
HAELNVELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSRE
Sbjct: 121 HAELNVELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSRE 180
Query: 181 EARTKILSIWDQADIVKVSEVELEFLTGIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYY 240
EARTKILSIWDQADIVKVSEVELEFLTGIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYY
Sbjct: 181 EARTKILSIWDQADIVKVSEVELEFLTGIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYY 240
Query: 241 ARDFRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAIT 300
ARDFRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAIT
Sbjct: 241 ARDFRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAIT 300
Query: 301 ATKKGAIPSLPTEVEVLKLMESA 323
ATKKGAIPSLPTEVEVLKLMESA
Sbjct: 301 ATKKGAIPSLPTEVEVLKLMESA 323
>Os08g0113100 Similar to Fructokinase (Fragment)
Length = 336
Score = 416 bits (1070), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/318 (62%), Positives = 245/318 (77%)
Query: 6 ELVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLGDDE 65
LVVSFGEMLIDFVP VAGVSLAE+ FVKAPGGAPANVA A+++LGG +AFVGK GDDE
Sbjct: 17 NLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAISKLGGSSAFVGKFGDDE 76
Query: 66 FGRMLAAILRXXXXXXXXXXFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTHAELN 125
FG ML IL+ FD ARTALAFVTL+++GEREFMFYRNPSADMLLT AELN
Sbjct: 77 FGHMLVDILKKNGVNAEGCLFDEHARTALAFVTLKSNGEREFMFYRNPSADMLLTEAELN 136
Query: 126 VELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEARTK 185
++LI+RA +FHYGSISLI EPCRSAH+ AM AK AG L SYDPN+R LWPS + AR
Sbjct: 137 LDLIRRAKIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPNVRLPLWPSEDAARAG 196
Query: 186 ILSIWDQADIVKVSEVELEFLTGIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYARDFR 245
ILSIW +AD +KVS+ E+ FLT D+ ++ V+ LW +KLL+VT G++GC+Y+ +DF+
Sbjct: 197 ILSIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLWFDGLKLLIVTDGEKGCRYFTKDFK 256
Query: 246 GAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKG 305
G+VP + V VDTTGAGDAFVG+LL + +D S +++KL EA+KF+NACGAI TKKG
Sbjct: 257 GSVPGFSVNTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKG 316
Query: 306 AIPSLPTEVEVLKLMESA 323
AIP+LPT +L+ A
Sbjct: 317 AIPALPTVAVAQELISKA 334
>Os06g0232200 Ribokinase family protein
Length = 401
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/314 (62%), Positives = 244/314 (77%), Gaps = 1/314 (0%)
Query: 5 SELVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLGDD 64
S VV FGE+LIDFVPTV GVSLAEA AF KAPGGAPANVA+ +ARLGG +AF+GK+GDD
Sbjct: 76 SPHVVCFGELLIDFVPTVNGVSLAEASAFKKAPGGAPANVAVGIARLGGSSAFIGKVGDD 135
Query: 65 EFGRMLAAILRXXXXXXXXXXFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTHAEL 124
EFG MLA IL+ FDA ARTALAFVTLR DGEREFMFYRNPSADMLL EL
Sbjct: 136 EFGYMLADILKENNVNNQGLLFDAHARTALAFVTLRNDGEREFMFYRNPSADMLLEEKEL 195
Query: 125 NVELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEART 184
+++LI++A +FH+GSISLI EPC++AH+ A + AK+AG L+SYDPNLR LW S ++AR
Sbjct: 196 DLDLIRKAKIFHHGSISLITEPCKTAHIAAAKAAKDAGVLISYDPNLRLPLWSSADDARD 255
Query: 185 KILSIWDQADIVKVSEVELEFLT-GIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYARD 243
ILSIW+ AD++K+SE E+ FLT G D +D V+ KL P +KLLLVT G +GC+YY+++
Sbjct: 256 GILSIWETADVIKISEEEVSFLTKGEDPYDDSVIKKLMHPNLKLLLVTEGPEGCRYYSKE 315
Query: 244 FRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATK 303
F G V KV VDTTGAGDAFV +L ++ D S LQD+ +L+EA+KFAN CGA+T T+
Sbjct: 316 FNGRVGGLKVNAVDTTGAGDAFVAGILSQLSVDFSLLQDEGRLKEALKFANVCGALTVTE 375
Query: 304 KGAIPSLPTEVEVL 317
+GAIP+LPT +V+
Sbjct: 376 RGAIPALPTRQQVV 389
>Os01g0851000 PfkB domain containing protein
Length = 531
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/368 (34%), Positives = 175/368 (47%), Gaps = 53/368 (14%)
Query: 7 LVVSFGEMLIDFVPTV-------------AGVSLA-EAPAFVKAPGGAPANVAIAVARLG 52
LV FG +FVPTV + L E P F +APG A +NVAIA+ RLG
Sbjct: 156 LVCCFGAPRWEFVPTVRVSDRQMHPDIYSTWLHLQWEPPEFARAPGSAASNVAIALTRLG 215
Query: 53 GGAAFVGKLGDDEFGRMLAAILRXXXXXXXXXXFDAGARTALAFVTL----RADGE---R 105
G AA +GK+GDD+FGR L + FD GA TA A + + R DG R
Sbjct: 216 GRAAVLGKVGDDDFGRELVYRMNCERVQTRAIRFDDGAATATARMKVGFRDREDGSGGTR 275
Query: 106 EFMFYRNPSADMLLTHAELNVELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALL 165
+A+ L+ AE+NV+++K A VFH+ S L+ S RA+E++K+ G+ +
Sbjct: 276 LVAETVKSAAEDSLSKAEINVDVLKEARVFHFNSEVLLTPSMESTLFRAIELSKKFGSKI 335
Query: 166 SYDPNLREALWPSREEARTKILSIWDQADIVKVSEVELEFLTGIDSVE------------ 213
+D NL LW SR+E + I W++ADI++VS ELEFL + +
Sbjct: 336 FFDLNLPLPLWRSRDETKELINKAWNEADIIEVSRDELEFLLDHEYYQYKRANPPQYYLD 395
Query: 214 ---------------DDVVMKLWRPTMKLLLVTLGDQGCKYYARDFRGAVPSYK-----V 253
+ + +W +KLLLVT G YY F G V +
Sbjct: 396 GFHLTRNWPQYYHYTPEEIAPIWHDGIKLLLVTYGTLRIHYYTPKFHGCVIGTEDALITP 455
Query: 254 QQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKGAIPSLPTE 313
D TG+GDA V A +R++ P +DQ LE ++FA A G I+ GA+ PTE
Sbjct: 456 YTTDRTGSGDAVVAAAIRKLTSCPEMYEDQDTLERNLRFAVAAGIISQWTIGAVRGFPTE 515
Query: 314 VEVLKLME 321
L E
Sbjct: 516 SAAQNLKE 523
>Os03g0602600 PfkB domain containing protein
Length = 216
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 21/160 (13%)
Query: 128 LIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEARTKIL 187
L+ +A +F+Y S +L+ RS+ +A+E++K+ G + +D NL LW S +E ++ +
Sbjct: 37 LLMQAKMFYYNSSALLEPTTRSSLSKAIEVSKKFGGVTFFDLNLPLPLWSSSKETKSLVK 96
Query: 188 SIWDQADIVKVSEVELEFLTGIDSVED----------------DVVMKLWRPTMKLLLVT 231
W+ ADI+++++ ELEFL GI E +VV KLW +K+L VT
Sbjct: 97 EAWEAADIIEITKQELEFLCGIKPSEKFGTKDNDKSKFTHYSPEVVTKLWHENLKVLFVT 156
Query: 232 LGDQGCKYYARDFRGAVPSYKVQQV-----DTTGAGDAFV 266
G YY ++ G V + + D + +GDA V
Sbjct: 157 NGTSKIHYYTKEHDGWVRGTEDAPITPFTGDMSQSGDAIV 196
>Os01g0665400 Ribokinase family protein
Length = 367
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 130/296 (43%), Gaps = 34/296 (11%)
Query: 38 GGAPANVAIAVARLGGGAAF-VGKLGDDEFGRMLAAILRXXXXXXXXXXFDA-GARTALA 95
GG AN A RL G + V ++GDD GR+L L A GA + A
Sbjct: 91 GGKGANQAACGGRLAAGPTYLVARVGDDANGRLLEGALADAGGVRLDRVARAPGAPSGHA 150
Query: 96 FVTLRADGEREFMFYRNPSADMLLTH-AELNVELIKRAAVFHYGSISLIAEPCRSAHLRA 154
V L G+ + + + + +++LI+RA V L E +++
Sbjct: 151 VVMLMPGGQNSIIIVGGANMEGWASGVGSDDLDLIRRAGVLL-----LQREIPDWVNVQV 205
Query: 155 MEIAKEAGALLSYDPNLREALWPSREEARTKILSIWDQADIVKVSEVELEFLTGIDSVED 214
+ AK AG + D +A P ++LS+ DI +E EL LTG+ +
Sbjct: 206 AQAAKGAGVPVILDAGGMDAPVPG------ELLSL---VDIFSPNETELARLTGMPTETF 256
Query: 215 DVVMK----LWRPTMKLLLVTLGDQGCKYYARDF----RGAVPSYKVQQVDTTGAGDAFV 266
+ + + + +K +LV LG QG + + +P+ +V VDTTGAGD F
Sbjct: 257 EQISRAAGACHKMGVKEVLVKLGSQGSALFIEGGEPIRQPIIPATEV--VDTTGAGDTFT 314
Query: 267 GALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKGAIPSLPTEVEVLKLMES 322
A +V+ K EE ++FA A ++ KGAIPS+P V+ L+ES
Sbjct: 315 SAFAVALVEG-------KPKEECMRFAAAAASLCVQVKGAIPSMPDRKSVMDLLES 363
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,210,370
Number of extensions: 410862
Number of successful extensions: 1147
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1143
Number of HSP's successfully gapped: 7
Length of query: 323
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 222
Effective length of database: 11,762,187
Effective search space: 2611205514
Effective search space used: 2611205514
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)