Os03g0602600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : PfkB domain containing protein.
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Os03g0602600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : PfkB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 349.97 | 0.879 | 8.5 | 2.11 | 3.62 | 2.45 | -2.37 | 4.29 | 0.0697 | 18 | 6.745 | 95 | 8 | 19.9 |
| 361.02 | 0.885 | 8.53 | 1.88 | 3.35 | 2.66 | -0.783 | -- | -0.0105 | 17.9 | 0.02596 | 137 | 8.09 | 19.2 |
| 358.46 | 0.882 | 8.52 | 2.05 | 3.6 | 2.45 | -- | 2.67 | 0.0585 | 18 | 4.193 | 100 | 8.18 | 19.7 |
| 360.81 | 0.885 | 8.54 | 1.94 | 3.25 | 2.67 | -- | -- | 0.0174 | 17.9 | -1.546 | 148 | 8.03 | 19.2 |
| 419.34 | 0.954 | 8.4 | 2.16 | -- | 5.28 | -- | 0.822 | 0.432 | -- | -8.67 | 385 | 7.11 | 15.7 |
| 467.65 | 1.01 | 8.55 | 2.18 | 5.04 | -- | -0.124 | -- | 0.0881 | 17.8 | -- | -- | -- | -- |
| 467.69 | 1.01 | 8.55 | 2.18 | 5.04 | -- | -- | -- | 0.0876 | 17.8 | -- | -- | -- | -- |
| 400.97 | 0.933 | 8.44 | 1.93 | -- | 5.6 | -- | -- | 0.082 | -- | -9.167 | 376 | 7.02 | 16.2 |
| 456.25 | 0.995 | 8.57 | -- | 2.91 | 3.16 | -- | -- | -0.135 | 17.9 | 2.257 | 140 | 8.27 | 19 |
| 1782.61 | 1.97 | 8.47 | 2.03 | -- | -- | -- | -- | -0.0301 | -- | -- | -- | -- | -- |
| 593.08 | 1.14 | 8.61 | -- | 5 | -- | -- | -- | -0.155 | 17.9 | -- | -- | -- | -- |
| 482.31 | 1.02 | 8.52 | -- | -- | 5.84 | -- | -- | -0.267 | -- | -1.106 | 375 | 7.02 | 16.2 |
| 1891 | 2.03 | 8.52 | -- | -- | -- | -- | -- | -0.255 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 353.96 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 3 | 358.54 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 4 | 360.09 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 15 | 363.50 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 32 | 368.25 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 34 | 368.67 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 35 | 368.75 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 51 | 371.28 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 56 | 371.95 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 76 | 373.93 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 81 | 374.18 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 95 | 374.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 96 | 374.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 123 | 376.69 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 9 |
| 127 | 376.85 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 137 | 377.40 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 138 | 377.40 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 149 | 377.69 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 156 | 378.02 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 165 | 378.25 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 168 | 378.27 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 170 | 378.27 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 171 | 378.27 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 173 | 378.27 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 174 | 378.27 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 175 | 378.27 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 177 | 378.42 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 19 |
| 182 | 378.60 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 195 | 378.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 198 | 378.76 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 200 | 378.92 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 226 | 379.77 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 239 | 379.99 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 11 |
| 249 | 380.29 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 312 | 381.44 | temperature | 25.0 | 90 | > th | dose dependent | sin | 3 | NA |
| 319 | 381.64 | temperature | 15.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 355 | 382.17 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 358 | 382.19 | wind | 5.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 420 | 382.95 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 7 |
| 428 | 383.20 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 3 |
| 429 | 383.20 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 433 | 383.23 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 436 | 383.28 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 441 | 383.44 | temperature | 25.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 442 | 383.44 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 21 | 5 |
| 457 | 383.63 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 459 | 383.63 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 460 | 383.63 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 462 | 383.63 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 463 | 383.63 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 464 | 383.63 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 513 | 384.53 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 22 | 14 |
| 526 | 384.65 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 527 | 384.69 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 532 | 384.76 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 577 | 385.52 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 7 |
| 605 | 385.62 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 611 | 385.70 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 20 | 7 |
| 612 | 385.70 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 15 |
| 654 | 386.04 | wind | 9.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 660 | 386.10 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 671 | 386.27 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 689 | 386.56 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 699 | 386.67 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 708 | 386.80 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 18 |
| 743 | 387.23 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 22 | 3 |
| 746 | 387.25 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 753 | 387.39 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 776 | 387.50 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 803 | 388.04 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 918 | 389.35 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 930 | 389.50 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 948 | 389.66 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 954 | 389.73 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 961 | 389.87 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 992 | 390.02 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 23 | 7 |
| 994 | 390.03 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 5 |