BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0849600 Os01g0849600|AK108159
(162 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0849600 Similar to ENOD18 protein (Fragment) 333 5e-92
Os05g0453700 Similar to ENOD18 protein (Fragment) 199 7e-52
Os05g0157200 Universal stress protein (Usp) family protein 186 6e-48
Os02g0773200 Universal stress protein (Usp) family protein 184 2e-47
Os01g0170600 Universal stress protein (Usp) family protein 151 2e-37
Os02g0760500 Similar to ER6 protein (Fragment) 84 4e-17
Os01g0303800 Universal stress protein (Usp) family protein 75 2e-14
AK103732 75 2e-14
Os03g0750000 Universal stress protein (Usp) family protein 73 1e-13
>Os01g0849600 Similar to ENOD18 protein (Fragment)
Length = 162
Score = 333 bits (853), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 162/162 (100%), Positives = 162/162 (100%)
Query: 1 MTEAGGERRIGVAMDFSPSSKKALQWAADNLLRKGDTLVLLHIRHHGRDEAKNVLWSHTG 60
MTEAGGERRIGVAMDFSPSSKKALQWAADNLLRKGDTLVLLHIRHHGRDEAKNVLWSHTG
Sbjct: 1 MTEAGGERRIGVAMDFSPSSKKALQWAADNLLRKGDTLVLLHIRHHGRDEAKNVLWSHTG 60
Query: 61 SPLIPLEELMETAVRQRYDIPSDEEVFDMLNAVSREKELSVVLKMYWGEPREKVCEAVGE 120
SPLIPLEELMETAVRQRYDIPSDEEVFDMLNAVSREKELSVVLKMYWGEPREKVCEAVGE
Sbjct: 61 SPLIPLEELMETAVRQRYDIPSDEEVFDMLNAVSREKELSVVLKMYWGEPREKVCEAVGE 120
Query: 121 LNLESLVMGSRGLGQIQRILLGSVTNYVLSNASCPVTVVKAK 162
LNLESLVMGSRGLGQIQRILLGSVTNYVLSNASCPVTVVKAK
Sbjct: 121 LNLESLVMGSRGLGQIQRILLGSVTNYVLSNASCPVTVVKAK 162
>Os05g0453700 Similar to ENOD18 protein (Fragment)
Length = 165
Score = 199 bits (506), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 103/159 (64%), Positives = 125/159 (78%)
Query: 4 AGGERRIGVAMDFSPSSKKALQWAADNLLRKGDTLVLLHIRHHGRDEAKNVLWSHTGSPL 63
A ERRIGVAMD+S SSK+AL WA NLLR+GD LV+LH+ HHG +EAK+ LW +GSPL
Sbjct: 7 ADDERRIGVAMDYSASSKRALDWAIANLLRRGDHLVVLHVLHHGGEEAKHALWGKSGSPL 66
Query: 64 IPLEELMETAVRQRYDIPSDEEVFDMLNAVSREKELSVVLKMYWGEPREKVCEAVGELNL 123
IPL E + Q+Y + D EV DML+ +R+ EL+VV K+YWG+ REK+C+AV E +
Sbjct: 67 IPLSEFRDPTAMQQYGVHCDAEVLDMLDTAARQLELTVVAKLYWGDAREKLCDAVEEQKI 126
Query: 124 ESLVMGSRGLGQIQRILLGSVTNYVLSNASCPVTVVKAK 162
++LVMGSRGLG IQRILLGSVTNYVLSNASCPVTVVK K
Sbjct: 127 DTLVMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVKGK 165
>Os05g0157200 Universal stress protein (Usp) family protein
Length = 167
Score = 186 bits (472), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 119/158 (75%), Gaps = 1/158 (0%)
Query: 4 AGGERRIGVAMDFSPSSKKALQWAADNLLRKGDTLVLLHI-RHHGRDEAKNVLWSHTGSP 62
A ER +G A+DFS S+ AL+WAADNLLR GD L+LLH+ + ++ + +LW TGSP
Sbjct: 6 AAAERWVGAAVDFSEGSRAALRWAADNLLRAGDHLILLHVLKDPDYEQGETLLWEATGSP 65
Query: 63 LIPLEELMETAVRQRYDIPSDEEVFDMLNAVSREKELSVVLKMYWGEPREKVCEAVGELN 122
LIPL + E + ++Y D E DMLN V+R+KE+ VV K+ WG+PREK+C+A+ E+
Sbjct: 66 LIPLSDFSEPTIAKKYGAKPDAETLDMLNTVARQKEVVVVFKVLWGDPREKLCQAINEIP 125
Query: 123 LESLVMGSRGLGQIQRILLGSVTNYVLSNASCPVTVVK 160
+ LV+GSRGLG+++R+LLGSV++YV++NA+CPVTVVK
Sbjct: 126 MSCLVIGSRGLGKLKRVLLGSVSDYVVNNATCPVTVVK 163
>Os02g0773200 Universal stress protein (Usp) family protein
Length = 165
Score = 184 bits (467), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 117/158 (74%)
Query: 4 AGGERRIGVAMDFSPSSKKALQWAADNLLRKGDTLVLLHIRHHGRDEAKNVLWSHTGSPL 63
A +R IG+ MD+SPSSK A +WA DNL++ GD ++L+H+ G D + LW TGSPL
Sbjct: 2 AAEKRTIGLGMDYSPSSKAAAKWAVDNLVKAGDRIILVHVLPKGADASHKELWKSTGSPL 61
Query: 64 IPLEELMETAVRQRYDIPSDEEVFDMLNAVSREKELSVVLKMYWGEPREKVCEAVGELNL 123
IPL E ME V+ RY I D+EV ++L A S+ K++ V+ K+YWG+ REK+CEAV +L +
Sbjct: 62 IPLLEFMEMNVQARYGINPDKEVLEILQAESKSKQVEVLAKVYWGDAREKLCEAVDDLKV 121
Query: 124 ESLVMGSRGLGQIQRILLGSVTNYVLSNASCPVTVVKA 161
+ V+G RGLG ++R LLGSV+NYV++NA+CPVTVV+A
Sbjct: 122 NTFVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVVRA 159
>Os01g0170600 Universal stress protein (Usp) family protein
Length = 160
Score = 151 bits (382), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 109/156 (69%), Gaps = 1/156 (0%)
Query: 6 GERRIGVAMDFSPSSKKALQWAADNLLRKGDTLVLLHIRHHGRDEAKNV-LWSHTGSPLI 64
G R+IGVA+DFS SK AL+WA+ NL R GD LVL+H+ +E V LW +GSPLI
Sbjct: 2 GGRKIGVAVDFSSCSKAALRWASTNLTRSGDQLVLIHVNSSYHNEQGAVQLWEQSGSPLI 61
Query: 65 PLEELMETAVRQRYDIPSDEEVFDMLNAVSREKELSVVLKMYWGEPREKVCEAVGELNLE 124
PL E + V + Y + D+E ++LN +S ++ + V+ K+ +G+P +K+ EAV + L
Sbjct: 62 PLAEFSDPHVAKTYAVSPDKETLEILNQMSNQRGVEVLAKILYGDPAKKLYEAVDLVPLN 121
Query: 125 SLVMGSRGLGQIQRILLGSVTNYVLSNASCPVTVVK 160
LV+G+RGL ++R L+GSV++Y+++NA+CPVTVVK
Sbjct: 122 CLVVGNRGLSTLKRALMGSVSSYIVNNATCPVTVVK 157
>Os02g0760500 Similar to ER6 protein (Fragment)
Length = 162
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 5 GGERRIGVAMDFSPSSKKALQWAADNL-LRKGDTLVLLHIRHHGRDEAK-NVLWSHTGSP 62
G + VA+D S S AL+WA DNL LR LV+LH++ A N G P
Sbjct: 4 GNLASVVVAVDGSEESMNALRWALDNLRLRPDGALVVLHVQPPPSIAAGLNPGPIPFGGP 63
Query: 63 LIPLEELMETAVRQRYDIPS---DEEVFDMLNAVSREKELSVVLKMYWGEPREKVCEAVG 119
E+ A Q + + + D + EK + V + G+P+EK+CE
Sbjct: 64 ----SEVEVPAFTQAIEAHQRRITQAILDHALKICSEKNVEVKTDVVVGDPKEKICEVTA 119
Query: 120 ELNLESLVMGSRGLGQIQRILLGSVTNYVLSNASCPVTVVK 160
L + LVMG R G ++R+ LGSV+NY ++N CPV V+K
Sbjct: 120 NLKADLLVMGCRAFGPLKRMFLGSVSNYCINNVVCPVVVIK 160
>Os01g0303800 Universal stress protein (Usp) family protein
Length = 182
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 8 RRIGVAMDFSPSSKKALQWAADNLLRK--GDTLVLLHIRHHGRDEAKNVLWSHTGSPLIP 65
RRI VA+D S S AL W N++ GDTLVLLH R + V + S +
Sbjct: 31 RRIVVAVDESEESTHALTWCLANVVSSSGGDTLVLLHAR-----RPRPVYAAMDSSGYMM 85
Query: 66 LEELMETAVRQRYDIPSDEEVFDMLNAVSRE-KELSVVLKMYWGEPREKVCEAVGELNLE 124
++M A +Y + ++V + G+PR+ +C+A ++ +
Sbjct: 86 TSDVM--ASMDKYAAAVSAAAVGKAKHICAAFPHVTVETMVESGDPRDVICDATEKMAAD 143
Query: 125 SLVMGSRGLGQIQRILLGSVTNYVLSNASCPVTVVK 160
LVMG+ G G IQR LGSV+N+ N CPV +VK
Sbjct: 144 LLVMGTHGYGLIQRAFLGSVSNHCAQNCKCPVLIVK 179
>AK103732
Length = 182
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 8 RRIGVAMDFSPSSKKALQWAADNLLRK--GDTLVLLHIRHHGRDEAKNVLWSHTGSPLIP 65
RRI VA+D S S AL W N++ GDTLVLLH R + V + S +
Sbjct: 31 RRIVVAVDESEESTHALTWCLANVVSSSGGDTLVLLHAR-----RPRPVYAAMDSSGYMM 85
Query: 66 LEELMETAVRQRYDIPSDEEVFDMLNAVSRE-KELSVVLKMYWGEPREKVCEAVGELNLE 124
++M A +Y + ++V + G+PR+ +C+A ++ +
Sbjct: 86 TSDVM--ASMDKYAAAVSAAAVGKAKHICAAFPHVTVETMVESGDPRDVICDATEKMAAD 143
Query: 125 SLVMGSRGLGQIQRILLGSVTNYVLSNASCPVTVVK 160
LVMG+ G G IQR LGSV+N+ N CPV +VK
Sbjct: 144 LLVMGTHGYGLIQRAFLGSVSNHCAQNCKCPVLIVK 179
>Os03g0750000 Universal stress protein (Usp) family protein
Length = 128
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 51/68 (75%)
Query: 93 VSREKELSVVLKMYWGEPREKVCEAVGELNLESLVMGSRGLGQIQRILLGSVTNYVLSNA 152
V +++E+S + G+ +E +C+AV E++ + LV+GSRGLG+I+R LGSV++Y++ +A
Sbjct: 54 VCKQREVSATGAIVEGDAKEAICQAVEEMHADMLVLGSRGLGKIKRAFLGSVSDYLVHHA 113
Query: 153 SCPVTVVK 160
CPV VVK
Sbjct: 114 CCPVLVVK 121
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.133 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,551,440
Number of extensions: 219858
Number of successful extensions: 637
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 630
Number of HSP's successfully gapped: 11
Length of query: 162
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 69
Effective length of database: 12,179,899
Effective search space: 840413031
Effective search space used: 840413031
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 152 (63.2 bits)