BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0826900 Os01g0826900|AK105709
(723 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0826900 Protein of unknown function DUF399 family protein 1286 0.0
Os01g0957200 Conserved hypothetical protein 190 4e-48
Os05g0388600 Conserved hypothetical protein 189 7e-48
Os04g0524400 Conserved hypothetical protein 106 5e-23
AK110446 95 2e-19
Os01g0812900 Conserved hypothetical protein 94 5e-19
Os07g0240300 Conserved hypothetical protein 83 6e-16
>Os01g0826900 Protein of unknown function DUF399 family protein
Length = 723
Score = 1286 bits (3329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 641/723 (88%), Positives = 641/723 (88%)
Query: 1 MLPPAPTRNPGACRFIXXXXXXXXXXXXXXXXXXRGGLCVAAASRRDFLLLVPSIAAAST 60
MLPPAPTRNPGACRFI RGGLCVAAASRRDFLLLVPSIAAAST
Sbjct: 1 MLPPAPTRNPGACRFIPLLPPKPLLSPAAAAASSRGGLCVAAASRRDFLLLVPSIAAAST 60
Query: 61 VLQSLPLSASAADDEKQXXXXXXXXXXXXXXXXXXXXXXXXLSRVYDATVIGEPQAVGKD 120
VLQSLPLSASAADDEKQ LSRVYDATVIGEPQAVGKD
Sbjct: 61 VLQSLPLSASAADDEKQAASPAPGPAAAPAPTSAGEPEAEALSRVYDATVIGEPQAVGKD 120
Query: 121 ARRRVWEKLMAARVVYLGEAELVPDRDDRVLELEVVRKLAARCAEAGRSISLALEAFPCN 180
ARRRVWEKLMAARVVYLGEAELVPDRDDRVLELEVVRKLAARCAEAGRSISLALEAFPCN
Sbjct: 121 ARRRVWEKLMAARVVYLGEAELVPDRDDRVLELEVVRKLAARCAEAGRSISLALEAFPCN 180
Query: 181 LQEQLNQFMDRRIDGNNLRLYTSHWAPERWQEYEPLLNYCRDNGVKLVACGTPLEVSRTV 240
LQEQLNQFMDRRIDGNNLRLYTSHWAPERWQEYEPLLNYCRDNGVKLVACGTPLEVSRTV
Sbjct: 181 LQEQLNQFMDRRIDGNNLRLYTSHWAPERWQEYEPLLNYCRDNGVKLVACGTPLEVSRTV 240
Query: 241 QAEGIRGLSKAQRKLYAPPAXXXXXXXXXXXXXRSLIDKISAIHGSPFGPSSYLSAQARV 300
QAEGIRGLSKAQRKLYAPPA RSLIDKISAIHGSPFGPSSYLSAQARV
Sbjct: 241 QAEGIRGLSKAQRKLYAPPAGSGFISGFTSISGRSLIDKISAIHGSPFGPSSYLSAQARV 300
Query: 301 VDDYTMSQKIMKEITNGYPSGMLVVVTGSSHVIYGSRGIGVPARISXXXXXXXXXXXLLN 360
VDDYTMSQKIMKEITNGYPSGMLVVVTGSSHVIYGSRGIGVPARIS LLN
Sbjct: 301 VDDYTMSQKIMKEITNGYPSGMLVVVTGSSHVIYGSRGIGVPARISKKMQKKKQVVVLLN 360
Query: 361 PERQGIRREGEIPVADFLWYSAAKPCSRNCFDRAEIARVMNAAGRRREALPQDLQKGIDL 420
PERQGIRREGEIPVADFLWYSAAKPCSRNCFDRAEIARVMNAAGRRREALPQDLQKGIDL
Sbjct: 361 PERQGIRREGEIPVADFLWYSAAKPCSRNCFDRAEIARVMNAAGRRREALPQDLQKGIDL 420
Query: 421 GVVSPEILQNFFDLEKYPVMAELIHRFQGFRERLLADPKFLHRLAIEEGISITTTLIAQY 480
GVVSPEILQNFFDLEKYPVMAELIHRFQGFRERLLADPKFLHRLAIEEGISITTTLIAQY
Sbjct: 421 GVVSPEILQNFFDLEKYPVMAELIHRFQGFRERLLADPKFLHRLAIEEGISITTTLIAQY 480
Query: 481 EKRKGRFLEEIDYVLTDTIRGSVVDFFTVWLPAPTISLLSLGDNXXXXXXXXXXXXXXXX 540
EKRKGRFLEEIDYVLTDTIRGSVVDFFTVWLPAPTISLLSLGDN
Sbjct: 481 EKRKGRFLEEIDYVLTDTIRGSVVDFFTVWLPAPTISLLSLGDNGSGESLELLKGLLGSL 540
Query: 541 PDNAFQKGIMGQSWNTNQRFASVLMGGIKLAGVGFISSIGAGVASDVLYAARRVLRPSTS 600
PDNAFQKGIMGQSWNTNQRFASVLMGGIKLAGVGFISSIGAGVASDVLYAARRVLRPSTS
Sbjct: 541 PDNAFQKGIMGQSWNTNQRFASVLMGGIKLAGVGFISSIGAGVASDVLYAARRVLRPSTS 600
Query: 601 VETARRRTPIWKSATVYSCFLGTSANLRYQVIAGLVEHRLGEYLMAYYNQPLLANLLSFV 660
VETARRRTPIWKSATVYSCFLGTSANLRYQVIAGLVEHRLGEYLMAYYNQPLLANLLSFV
Sbjct: 601 VETARRRTPIWKSATVYSCFLGTSANLRYQVIAGLVEHRLGEYLMAYYNQPLLANLLSFV 660
Query: 661 SRTINSYWGTQQWIDLARATGLQTSKKELPSPEISNLPDMPLLECGTTEVQNMDDSNKQQ 720
SRTINSYWGTQQWIDLARATGLQTSKKELPSPEISNLPDMPLLECGTTEVQNMDDSNKQQ
Sbjct: 661 SRTINSYWGTQQWIDLARATGLQTSKKELPSPEISNLPDMPLLECGTTEVQNMDDSNKQQ 720
Query: 721 PMK 723
PMK
Sbjct: 721 PMK 723
>Os01g0957200 Conserved hypothetical protein
Length = 389
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 172/299 (57%), Gaps = 13/299 (4%)
Query: 392 DRAEIARVMNAAGRRREALPQDLQKGIDLGVVSPEILQNFFDLEKYPVMAELIHRFQGFR 451
+R E V+ GR+ E+LP DL ++ G V+ EI++ F ++E ++ L+ +FQGFR
Sbjct: 101 NRREALFVLAQLGRKLESLPSDLAAAVEGGRVTGEIVRRFAEMEGSALLRWLL-QFQGFR 159
Query: 452 ERLLADPKFLHRLAIEEGISITTTLIAQYEKRKGRFLEEIDYVLTDTIRGSVVDFFTVWL 511
ERLLAD FL +LA+E G+ + A+YEKR+ F++EID V+ D + V DF V+L
Sbjct: 160 ERLLADDLFLAKLAMECGVGVIAKTAAEYEKRRENFVKEIDIVIADVVMAIVADFMLVYL 219
Query: 512 PAPTISLL-SLGDNXXXXXXXXXXXXXXXXPDNAFQKGIMGQSWNTNQRFASVLMGGIKL 570
PAPT+SL L N PDNAFQ + G+S++ QR ++L G KL
Sbjct: 220 PAPTVSLQPPLATN-----AGHIANFFHNCPDNAFQIALAGRSYSILQRLGAILRNGAKL 274
Query: 571 AGVGFISS-IGAGVASDVLYAARRVLRPSTSVETARRRTPIWKSATVYSCFLGTSANLRY 629
VG +S IG GV ++ L AR+ + E P+ ++ Y ++ S+NLRY
Sbjct: 275 FTVGTSASLIGTGV-TNALIKARKAVDKELDDEV--EDIPVLSTSVAYGVYMAVSSNLRY 331
Query: 630 QVIAGLVEHRLGEYLMAYYNQPLLANLLSFVSRTINSYWGTQQWIDLARATGLQTSKKE 688
Q++AG++E R+ E L+ +N LL + L F RT N++ G+ W+D AR G+Q ++E
Sbjct: 332 QILAGVIEQRMLEPLL--HNHKLLLSALCFAVRTGNTFLGSLLWVDYARWVGVQKVQEE 388
>Os05g0388600 Conserved hypothetical protein
Length = 378
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 166/293 (56%), Gaps = 11/293 (3%)
Query: 392 DRAEIARVMNAAGRRREALPQDLQKGIDLGVVSPEILQNFFDLEKYPVMAELIHRFQGFR 451
+R E V+ GR+ E+LP DL I+ G V EI+Q F DLEK + L+ +F GF+
Sbjct: 96 NRREALFVLAQLGRKLESLPADLAAAIEGGRVPGEIVQRFADLEKSGLFRWLL-QFGGFK 154
Query: 452 ERLLADPKFLHRLAIEEGISITTTLIAQYEKRKGRFLEEIDYVLTDTIRGSVVDFFTVWL 511
ERLLAD FL ++A+E G+ I T A+YE+R+ F++E+D+V+ D + V DF VWL
Sbjct: 155 ERLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFVKELDFVIADVVMAIVADFMLVWL 214
Query: 512 PAPTISLLSLGDNXXXXXXXXXXXXXXXXPDNAFQKGIMGQSWNTNQRFASVLMGGIKLA 571
PAPT+SL PDNAFQ + G S++ QR +++ G KL
Sbjct: 215 PAPTVSL----QPPLAVNAGSIAKFFHNCPDNAFQVALAGTSYSLLQRVGAIMRNGAKLF 270
Query: 572 GVGFISS-IGAGVASDVLYAARRVLRPSTSVETARRRTPIWKSATVYSCFLGTSANLRYQ 630
VG +S IG GV + ++ A + V S E PI ++ Y ++ S+NLRYQ
Sbjct: 271 AVGTSASLIGTGVTNALIKARKAV---SKDFEGESEDIPIVSTSVAYGVYMAVSSNLRYQ 327
Query: 631 VIAGLVEHRLGEYLMAYYNQPLLANLLSFVSRTINSYWGTQQWIDLARATGLQ 683
++AG++E R+ E L+ ++ L+ + L F RT N++ G+ W+D A+ G+Q
Sbjct: 328 ILAGVIEQRMLEPLLHHHK--LVLSALCFAVRTGNTFLGSLLWVDYAKWIGIQ 378
>Os04g0524400 Conserved hypothetical protein
Length = 399
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 126/287 (43%), Gaps = 10/287 (3%)
Query: 399 VMNAAGRRREALPQDLQKGIDLGVVSPEILQNFFDLEKYP-VMAELIHRFQGFRERLLAD 457
V+ A R +LP D+ + + +L +FDL+ P +A +I F R R+LAD
Sbjct: 121 VLRLAAARGVSLPADMMEAAKDAGIREVLLLRYFDLQAGPWPLAAMIRAFSMLRNRMLAD 180
Query: 458 PKFLHRLAIEEGISITTTLIAQYEKRKGRFLEEIDYVLTDTIRGSVVDFFTVWLPAPTIS 517
P FL ++ E I A+ +KR F E + D + G VVD V L AP +
Sbjct: 181 PSFLFKVGTEVVIDSCCATFAEVQKRGEDFWAEFELYAADLLVGVVVDIALVGLLAPYVR 240
Query: 518 LLSLGDNXXXXXXXXXXXXXXXXPDNAFQKGIMGQSWNTNQRFASVLMGGIKLAGVGFIS 577
+ P + F+ G + QR + G+ VGF+
Sbjct: 241 FGK--ASASTGPFGRFNRMAGSLPSSVFEAERPGCRFTVQQRIGTFFYKGVLYGSVGFVC 298
Query: 578 S-IGAGVASDVLYAARRVLRPSTSVETARRRTPIWKSATVYSCFLGTSANLRYQVIAGLV 636
IG G+A+ ++ A R V + + P+ KSA ++ FL S+N RYQ+I GL
Sbjct: 299 GIIGQGIANMIMTAKRSVKKSDEDIPV----PPLIKSAALWGVFLAVSSNTRYQIINGL- 353
Query: 637 EHRLGEYLMAYYNQPLLANLLSFVSRTINSYWGTQQWIDLARATGLQ 683
R+ E P +A + R N+ +G Q++D AR +G+Q
Sbjct: 354 -ERVVETSPIAKRVPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 399
>AK110446
Length = 413
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 23/282 (8%)
Query: 410 LPQDLQKGIDLGVVSPEILQNFFDLEKYPVMAELIHRFQGFRERLLADPKFLHRLAIEEG 469
LP D+ + + L + L+ L+ RF R+R++AD KFL ++ E
Sbjct: 147 LPADMLETAKSYGIRSTALAKYISLQSLVFTGGLVQRFPWIRDRMIADEKFLLKVVAEVL 206
Query: 470 ISITTTLIAQYEKRKGRFLEEIDYVLTDTIRGSVVDFFTVWLPAPTISLLSLGDNXXXXX 529
I +A+ KR F +E ++ L+D + G V+D V L AP LG
Sbjct: 207 IDSGCATVAEVRKRGDEFWQEFEFYLSDLLVGCVLDVVLVSLMAPRA---VLGGKAALLG 263
Query: 530 XXXXXXXXXXXPDNAFQKGIMG-QSWNTNQRFASVLMGGIK-----LAGV--GFISSIGA 581
P A + + G + + RFA + G+K LAG+ GF IG
Sbjct: 264 QSALQKCLGGIPSAALEASVKGVKQYTLGSRFACL---GVKFLEYSLAGITCGF---IGQ 317
Query: 582 GVASDVLYAARRVLRPSTSVETARRRTPIWKSATVYSCFLGTSANLRYQVIAGLVEHRLG 641
G+A+ ++ R++ E P++++A V+ F+G S+NLRYQ + GL R
Sbjct: 318 GIANSLMMLKRQI---HGEKEDDVAVPPLFRTALVWGLFMGVSSNLRYQAVFGL--ERAV 372
Query: 642 EYLMAYYNQPLLANLLSFVSRTINSYWGTQQWIDLARATGLQ 683
+ +A P +A + R IN+ G + +ID+AR G+Q
Sbjct: 373 DLTIA-KRVPAIAYGTTVAIRFINNVIGGENFIDMARWAGVQ 413
>Os01g0812900 Conserved hypothetical protein
Length = 348
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 23/239 (9%)
Query: 447 FQGFRERLLADPKFLHRLAIEEGISITTTLIAQYEKRKGRFLEEIDYVLTDTIRGSVVDF 506
G+ R+ ADP+F ++ +EE + ++ ++ R L E+D+V + + GS+++F
Sbjct: 96 LAGWAARVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNF 155
Query: 507 FTVWLPAPTISLLSLGDNXXXXXXXXXXXXXXXXPDNAFQKGIMGQSWNTNQRFASVLMG 566
++L APT P + F+ G +++ R A++L
Sbjct: 156 VLMYLLAPTAG-----------ASAAASAAASGLPSHMFEAG----AYSLGSRVATLLSK 200
Query: 567 GIKLAGVGFISSIGAGVASDVLYAARRVLRPSTSVETARRRTPIWKSATVYSCFLGTSAN 626
G A VGF + + S+ L + R+ + P + ET + P +A ++ +G S+N
Sbjct: 201 GATFAAVGFAAGLAGTAISNGLISLRKRMDP--AFETPNKAPPTLLNAATWAIHMGVSSN 258
Query: 627 LRYQVIAGLVEHRLGEYLMAYYNQPLLANLLSFVSRTINSYWGTQQWIDLARATGLQTS 685
LRYQ + G+ EYL+A P + + R IN+ G ++ LAR TG Q S
Sbjct: 259 LRYQTLNGV------EYLLANAAPPSVFKVSVVALRCINNVLGGMSFVLLARLTGSQKS 311
>Os07g0240300 Conserved hypothetical protein
Length = 443
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 119/278 (42%), Gaps = 12/278 (4%)
Query: 409 ALPQDLQKGIDLGVVSPEILQNFFDLEK--YPVMAELIHRFQGFRERLLADPKFLHRLAI 466
+LP D+ + + +L + D++ +P + I R R+L DP FL ++
Sbjct: 175 SLPADMIEAAKSVGIQKLLLLRYLDMQASAWP-LGPAIRSCSLLRNRMLVDPSFLFKIGT 233
Query: 467 EEGISITTTLIAQYEKRKGRFLEEIDYVLTDTIRGSVVDFFTVWLPAPTISLLSLGDNXX 526
E I A+ +KR F E + D + G VV+ V + AP G +
Sbjct: 234 EIVIDTCCATFAEVQKRGEEFWSEFELYAADMLVGVVVNVALVGMLAPYARF--GGGSAS 291
Query: 527 XXXXXXXXXXXXXXPDNAFQKGIMGQSWNTNQRFASVLMGGIKLAGVGFISS-IGAGVAS 585
P + F+ G S++ QR + GI VGF +G G+A+
Sbjct: 292 PGLLGRVRHAYDSLPSSVFEAERPGYSFSIQQRIGTYFFKGILYGTVGFFCGLVGQGIAN 351
Query: 586 DVLYAARRVLRPSTSVETARRRTPIWKSATVYSCFLGTSANLRYQVIAGLVEHRLGEYLM 645
++ A R V + V P+ K++ ++ FLG S+N RYQ+I GL R+ E
Sbjct: 352 LIMTAKRSVKKSDDDVPV----PPLLKTSALWGAFLGVSSNTRYQIINGL--ERVVEASP 405
Query: 646 AYYNQPLLANLLSFVSRTINSYWGTQQWIDLARATGLQ 683
P ++ + R N+ +G Q++D AR TG Q
Sbjct: 406 VAKRVPAVSLAFTVGVRFANNIYGGMQFVDWARMTGCQ 443
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,523,005
Number of extensions: 810893
Number of successful extensions: 1880
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1860
Number of HSP's successfully gapped: 7
Length of query: 723
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 615
Effective length of database: 11,396,689
Effective search space: 7008963735
Effective search space used: 7008963735
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 160 (66.2 bits)