Os04g0524400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0524400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.72 | 0.422 | 3.67 | 0.927 | 0.521 | 0.486 | 0.755 | 0.892 | 0.308 | 15.9 | 70.08 | 4090 | -- | -- |
| 81.8 | 0.421 | 3.68 | 0.969 | 0.524 | 0.567 | 0.795 | -- | 0.314 | 15.9 | 70.51 | 4090 | -- | -- |
| 82.37 | 0.423 | 3.67 | 0.931 | 0.523 | 0.485 | -- | 0.974 | 0.309 | 15.8 | 70.14 | 4085 | -- | -- |
| 83.6 | 0.426 | 3.67 | 0.997 | 0.525 | 0.566 | -- | -- | 0.338 | 15.9 | 71 | 4090 | -- | -- |
| 96.32 | 0.46 | 3.68 | 0.955 | -- | -0.328 | -- | -0.213 | 0.265 | -- | 70.05 | 4085 | -- | -- |
| 87.02 | 0.437 | 3.69 | 0.975 | 0.554 | -- | 0.813 | -- | 0.256 | 15.6 | -- | -- | -- | -- |
| 89.03 | 0.442 | 3.68 | 0.989 | 0.557 | -- | -- | -- | 0.261 | 15.6 | -- | -- | -- | -- |
| 96.55 | 0.46 | 3.68 | 0.949 | -- | -0.33 | -- | -- | 0.265 | -- | 70.05 | 4085 | -- | -- |
| 107.14 | 0.482 | 3.66 | -- | 0.54 | 0.59 | -- | -- | 0.344 | 15.8 | 74.97 | 7962 | -- | -- |
| 106.36 | 0.482 | 3.68 | 0.965 | -- | -- | -- | -- | 0.246 | -- | -- | -- | -- | -- |
| 114.79 | 0.501 | 3.71 | -- | 0.538 | -- | -- | -- | 0.151 | 15.6 | -- | -- | -- | -- |
| 117.63 | 0.507 | 3.71 | -- | -- | -0.353 | -- | -- | 0.132 | -- | 74.97 | 7962 | -- | -- |
| 130.93 | 0.534 | 3.71 | -- | -- | -- | -- | -- | 0.139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.72 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 3 | 80.05 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 5 | 80.30 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 19 | 3 |
| 6 | 80.32 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 8 | 80.39 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 9 | 80.40 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 11 |
| 10 | 80.41 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 12 | 80.41 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 11 |
| 16 | 80.44 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 5 |
| 18 | 80.44 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 10 |
| 29 | 80.45 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 33 | 80.48 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 35 | 80.54 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 5 |
| 51 | 80.57 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 52 | 80.57 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 58 | 80.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 10 |
| 60 | 80.60 | humidity | 70.0 | 4320 | > th | dose independent | sin | 13 | NA |
| 61 | 80.60 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 72 | 80.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 16 |
| 73 | 80.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 16 |
| 108 | 80.70 | humidity | 70.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 115 | 80.71 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 133 | 80.73 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 16 | NA |
| 153 | 80.74 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 16 | NA |
| 154 | 80.74 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 16 | NA |
| 156 | 80.75 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 183 | 80.79 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 11 |
| 184 | 80.79 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 192 | 80.81 | humidity | 80.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 198 | 80.81 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 2 | 7 |
| 228 | 80.84 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 266 | 80.87 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 273 | 80.87 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 15 | NA |
| 278 | 80.88 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 24 | 5 |
| 308 | 80.91 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 331 | 80.93 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 14 | 21 |
| 360 | 80.96 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 361 | 80.96 | humidity | 80.0 | 90 | > th | dose independent | rect. | 23 | 4 |
| 402 | 80.99 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 456 | 81.03 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 469 | 81.05 | wind | 1.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 512 | 81.09 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 9 | 11 |
| 527 | 81.09 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 537 | 81.10 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 21 | 4 |
| 552 | 81.12 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 15 | 9 |
| 612 | 81.16 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 15 | 7 |
| 739 | 81.22 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 9 | 11 |
| 753 | 81.22 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 15 | 16 |
| 754 | 81.23 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 768 | 81.23 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 774 | 81.23 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 818 | 81.24 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 834 | 81.25 | humidity | 70.0 | 4320 | > th | dose independent | no | NA | NA |
| 878 | 81.25 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 23 | 1 |
| 908 | 81.26 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 968 | 81.29 | wind | 1.0 | 4320 | < th | dose independent | rect. | 4 | 1 |