BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0524400 Os04g0524400|AK103349
(399 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G22790.1 | chr5:7599395-7601573 REVERSE LENGTH=434 466 e-131
AT2G37860.3 | chr2:15856952-15858793 FORWARD LENGTH=433 461 e-130
AT5G12470.1 | chr5:4044950-4047290 REVERSE LENGTH=387 127 1e-29
AT3G56140.1 | chr3:20829407-20832669 FORWARD LENGTH=746 124 1e-28
AT2G40400.1 | chr2:16869363-16872569 FORWARD LENGTH=736 120 2e-27
AT3G08640.1 | chr3:2622992-2624005 FORWARD LENGTH=338 114 6e-26
AT3G08630.1 | chr3:2620943-2621962 FORWARD LENGTH=340 114 1e-25
AT5G24690.1 | chr5:8455783-8458513 REVERSE LENGTH=522 94 2e-19
>AT5G22790.1 | chr5:7599395-7601573 REVERSE LENGTH=434
Length = 433
Score = 466 bits (1199), Expect = e-131, Method: Compositional matrix adjust.
Identities = 223/293 (76%), Positives = 252/293 (86%), Gaps = 1/293 (0%)
Query: 108 EEAEFGPLLGFDEVLRLAAARGVSLPADMMEAAKDAGIREVLLLRYFDLQAGPWPLAAMI 167
EE EFGP+L F+EV++ RG++LP DM+EAAK GIR++ LLRY DLQ WPL ++
Sbjct: 141 EEKEFGPILKFEEVMKETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLM 200
Query: 168 RAFSMLRNRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGEDFWAEFELYAADLLVGVVV 227
R+ +MLRNRMLADPSFLFKVGTEV IDSCCATFAEVQKRGEDFW+EFELYAADLLVG+VV
Sbjct: 201 RSCAMLRNRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVV 260
Query: 228 DIALVGLLAPYVRFGKAS-ASTGPFGRFNRMAGSLPSSVFEAERPGCRFTVQQRIGTFFY 286
D+ALVGLLAPY R GK S ASTG F R SLPSSVFEAERPGC+F+V QRI TFFY
Sbjct: 261 DVALVGLLAPYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFY 320
Query: 287 KGVLYGSVGFVCGIIGQGIANMIMTAKRSVKKSDEDIPVPPLIKSAALWGVFLAVSSNTR 346
KG+LYGSVGF CG+IGQGIAN+IMTAKRSVKKS+ED+P+PPL +SAALWGVFL +SSN R
Sbjct: 321 KGLLYGSVGFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNAR 380
Query: 347 YQIINGLERVVETSPIAKRVPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 399
YQIINGLERVVE S AKR+P VAMAFTVGVRFANN+YGGMQFVDWA+ SGVQ
Sbjct: 381 YQIINGLERVVEGSTAAKRIPVVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433
>AT2G37860.3 | chr2:15856952-15858793 FORWARD LENGTH=433
Length = 432
Score = 461 bits (1185), Expect = e-130, Method: Compositional matrix adjust.
Identities = 219/293 (74%), Positives = 253/293 (86%)
Query: 107 YEEAEFGPLLGFDEVLRLAAARGVSLPADMMEAAKDAGIREVLLLRYFDLQAGPWPLAAM 166
YEE EFGP+L F+EV++ ARG +LP+DM+EAAK+ GIR+VLLLRY DLQ+ L
Sbjct: 140 YEEKEFGPILKFEEVMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAGLLGFA 199
Query: 167 IRAFSMLRNRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGEDFWAEFELYAADLLVGVV 226
IR+++MLRNRMLADPSFLFK+G E+VIDSCCAT AEVQKRG+DFWAEFELY ADLLVG V
Sbjct: 200 IRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTV 259
Query: 227 VDIALVGLLAPYVRFGKASASTGPFGRFNRMAGSLPSSVFEAERPGCRFTVQQRIGTFFY 286
V+IALVG+LAPYVRFG+ SAS G GR +LPSSVFEAERPGCRF+ QQR+ T+FY
Sbjct: 260 VNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFY 319
Query: 287 KGVLYGSVGFVCGIIGQGIANMIMTAKRSVKKSDEDIPVPPLIKSAALWGVFLAVSSNTR 346
KG++YG+VGF CGI+GQGIAN+IMTAKR++ KS+E+IPVPPLIKSAALWGVFL+VSSNTR
Sbjct: 320 KGIMYGAVGFGCGIVGQGIANLIMTAKRNINKSEENIPVPPLIKSAALWGVFLSVSSNTR 379
Query: 347 YQIINGLERVVETSPIAKRVPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 399
YQIINGLERVVE SP AK+ PP AMAFTVGVR ANNIYGGMQFVDWAR SG Q
Sbjct: 380 YQIINGLERVVEASPFAKKFPPAAMAFTVGVRLANNIYGGMQFVDWARLSGCQ 432
>AT5G12470.1 | chr5:4044950-4047290 REVERSE LENGTH=387
Length = 386
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 148/290 (51%), Gaps = 18/290 (6%)
Query: 119 DEVLRLAAARGV---SLPADMMEAAKDAGIREVLLLRYFDLQAGPWPLAAMIR---AFSM 172
+E + L G+ SLP D+ A + I ++ R+ +LQ +A++R F
Sbjct: 103 NEAMLLLKESGIELESLPKDLAAAIEAGRIPGSVITRFLELQK-----SAVMRWLMQFGG 157
Query: 173 LRNRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGEDFWAEFELYAADLLVGVVVDIALV 232
R R+LAD F+ K+ E + T AE ++R E+F+ E E+ AD+ + ++ D LV
Sbjct: 158 FRERLLADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLV 217
Query: 233 GLLAPYVRFGKASASTGPFGRFNRMAGSLPSSVFEAERPGCRFTVQQRIGTFFYKGVLYG 292
L AP V A T G ++ + P + F+ G +T+ QR+G G
Sbjct: 218 YLPAPTVSLRPPLALTA--GGISKFFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLF 275
Query: 293 SVGFVCGIIGQGIANMIMTAKRSVKKSDE-DIPVPPLIKSAALWGVFLAVSSNTRYQIIN 351
+VG ++G I N + A+++V ++ E ++ P++ ++ +GV++AVSSN RYQI+
Sbjct: 276 AVGTTSSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVA 335
Query: 352 GL--ERVVETSPIAKRVPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 399
G+ +R++E P+ + A VR N G + +VD+AR G+Q
Sbjct: 336 GVIEQRLLE--PMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQ 383
>AT3G56140.1 | chr3:20829407-20832669 FORWARD LENGTH=746
Length = 745
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 137/285 (48%), Gaps = 8/285 (2%)
Query: 121 VLRLAAARGVSLPADMMEAAKDAGIREVLLLRYFDLQAGPWPLAAMIRAFSMLRNRMLAD 180
V+ A R +LP D+ + +L FDL+ P ++ + + F R R+LAD
Sbjct: 426 VMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPL-ISELTQRFQGFRERLLAD 484
Query: 181 PSFLFKVGTEVVIDSCCATFAEVQKRGEDFWAEFELYAADLLVGVVVDIALVGLLAPYVR 240
P FL ++ E I A+ +KR E+F+ E + D + G VVD V L AP +
Sbjct: 485 PKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFTVWLPAPTLS 544
Query: 241 F-GKASASTGP--FGRFNRMAGSLPSSVFEAERPGCRFTVQQRIGTFFYKGVLYGSVGFV 297
F A +TGP + GS+P + F+ G + + RI + G+ VG V
Sbjct: 545 FLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGGLKLAGVGVV 604
Query: 298 CGIIGQGIANMIMTAKRSVKKS---DEDIPVPPLIKSAALWGVFLAVSSNTRYQIINGLE 354
G +N + A++ +K E PL+K+A ++G FL S+N RYQII GL
Sbjct: 605 SSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANLRYQIIAGLI 664
Query: 355 RVVETSPIAKRVPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 399
+ ++ + P + A + VR N+ +G Q++D AR +G+Q
Sbjct: 665 EHRLSDELSSQ-PLLVNAISFVVRTLNSYFGTQQWIDLARSTGLQ 708
>AT2G40400.1 | chr2:16869363-16872569 FORWARD LENGTH=736
Length = 735
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 137/285 (48%), Gaps = 8/285 (2%)
Query: 121 VLRLAAARGVSLPADMMEAAKDAGIREVLLLRYFDLQAGPWPLAAMIRAFSMLRNRMLAD 180
V+ A R +LP D+ + + +L +FDL+ P ++ + + F R R+LAD
Sbjct: 417 VMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPL-ISELTQRFQGFRERLLAD 475
Query: 181 PSFLFKVGTEVVIDSCCATFAEVQKRGEDFWAEFELYAADLLVGVVVDIALVGLLAPYVR 240
P FL ++ E I A+ +KR E+F+ E + D + VVD V L AP +
Sbjct: 476 PKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWLPAPTLS 535
Query: 241 F-GKASASTGP--FGRFNRMAGSLPSSVFEAERPGCRFTVQQRIGTFFYKGVLYGSVGFV 297
F A + GP + GS+P + F+ G +T+ RI + G+ VG V
Sbjct: 536 FISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKLAGVGVV 595
Query: 298 CGIIGQGIANMIMTAKRSVKKS---DEDIPVPPLIKSAALWGVFLAVSSNTRYQIINGLE 354
G +N + ++ +K E P++K+A ++G +L SSN RYQII GL
Sbjct: 596 SSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNIRYQIIAGLI 655
Query: 355 RVVETSPIAKRVPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 399
+ ++ + P + + VR AN+ +G Q++D AR +G+Q
Sbjct: 656 EHRISDELSSQ-PLLVNMISFVVRVANSYFGTQQWIDLARSTGLQ 699
>AT3G08640.1 | chr3:2622992-2624005 FORWARD LENGTH=338
Length = 337
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 130/248 (52%), Gaps = 24/248 (9%)
Query: 157 QAGPW-PLAAMIRAFSMLRNRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGEDFWAEFE 215
++ PW P+ I+ + R+R+ ADP F FKV E ++ ++ R E +
Sbjct: 94 ESSPWGPIGLFIQGW---RSRVAADPQFPFKVLMEEIVGLSACVLGDMASRPNFGLNELD 150
Query: 216 LYAADLLVGVVVDIALVGLLAPYVRFGKASASTGPFGRFNRMAGSLPSS-VFEAERPGCR 274
+ L+VG +++ L+ +LAP +A+ G + + PSS +FE
Sbjct: 151 FVFSTLVVGSILNFVLMYMLAP------TAATLGSSQTLPGIFRNCPSSHMFEQGS---- 200
Query: 275 FTVQQRIGTFFYKGVLYGSVGFVCGIIGQGIANMIMTAKRSVKKSDE--DIPVPPLIKSA 332
FTV R GT YKG+++ SVG G++G I+N ++ ++ + S E + P PP + ++
Sbjct: 201 FTVMNRFGTLVYKGMVFASVGLAAGLVGTAISNGLIMLRKKMDPSFETPNKP-PPTVLNS 259
Query: 333 ALWGVFLAVSSNTRYQIINGLERVVETSPIAKRVPPVAMAFTVGV-RFANNIYGGMQFVD 391
W + VS+N RYQ +NG+E + +AK +PP+ +V V R ANN+ GGM FV
Sbjct: 260 LTWATHMGVSANARYQTLNGIEFL-----LAKVLPPLVFKTSVIVLRCANNVAGGMSFVL 314
Query: 392 WARWSGVQ 399
AR +G Q
Sbjct: 315 LARMTGSQ 322
>AT3G08630.1 | chr3:2620943-2621962 FORWARD LENGTH=340
Length = 339
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 126/246 (51%), Gaps = 26/246 (10%)
Query: 160 PW-PLAAMIRAFSMLRNRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGEDFWAEFELYA 218
PW PL I+ + R+R+ AD F FKV E+++ ++ R E +
Sbjct: 94 PWGPLGLFIQGW---RSRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVF 150
Query: 219 ADLLVGVVVDIALVGLLAPY-VRFGKASASTGPFGRFNRMAGSLPSS-VFEAERPGCRFT 276
+ L+VG +++ L+ LLAP + G ++ G F S PSS +FE FT
Sbjct: 151 STLVVGSILNFTLMYLLAPSAISHGSSNLLPGIFR-------SCPSSHMFEQ----GNFT 199
Query: 277 VQQRIGTFFYKGVLYGSVGFVCGIIGQGIANMIMTAKRSVKKSDE--DIPVPPLIKSAAL 334
+ R GT YKG+++ +VG G++G I+N ++ ++ + S E + P P L+ S
Sbjct: 200 LMNRFGTLVYKGMVFATVGLAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLT- 258
Query: 335 WGVFLAVSSNTRYQIINGLERVVETSPIAKRVPPVAMAFTV-GVRFANNIYGGMQFVDWA 393
W + VS+N RYQ +NG E ++E K +PP+ +V +R NN+ GGM FV A
Sbjct: 259 WATHMGVSANVRYQTLNGAEFLLE-----KSLPPLVFKTSVIALRVVNNVLGGMSFVTLA 313
Query: 394 RWSGVQ 399
R +G Q
Sbjct: 314 RMTGSQ 319
>AT5G24690.1 | chr5:8455783-8458513 REVERSE LENGTH=522
Length = 521
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 133/288 (46%), Gaps = 24/288 (8%)
Query: 119 DEVLRLAAARGVSLPADMMEAAKDAGIREVLLLRYFDLQAGPWPLAAMIRAFSM-----L 173
D VL + LPA + +A + + ++++ + A P + RA
Sbjct: 178 DAVLNEWQKTMMDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTTRMISRALPQGLSRAF 237
Query: 174 RNRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGEDFWAEFELYAADLLVGVVVDIALVG 233
RMLADP+FL+K+ E C+ + EV+ R E++L ++L + A V
Sbjct: 238 VGRMLADPAFLYKLLLEQAATVGCSVWWEVKNRKNRLKEEWDLALINVLTVSACNAAAVW 297
Query: 234 LLAPYVRFGKASASTGPFGRFNRMAGSLPSSVFEAERPGCRFTVQQRIGTFFYKGVLYGS 293
LLAP +G +T F N + LP+++FE P F +Q+R + FYK
Sbjct: 298 LLAPCRSYG----NTFRFDLQNTLQ-KLPNNLFEMSYPLREFDLQKRFHSLFYKAAELSI 352
Query: 294 VGFVCGIIGQGIANMIMTAKRSVKKSDEDIPVPPLIKSAALWGVFLAVSSNTRYQIINGL 353
+G G + QG + ++ K KK+ + VP + +A +G FL + +N RYQ++ G
Sbjct: 353 LGLAAGTL-QGSLSNVLAGK---KKNRVSVTVPSISTNALGYGAFLGIYANLRYQLLCGF 408
Query: 354 ERVVETSPIAKRVPPVAMAFTVGVRFANNIYGGMQFVDWAR--WSGVQ 399
ER V + V VA+ F +R N +Q + +R W GV+
Sbjct: 409 ERGVSSH---FDVIGVALFFGTALRIMN-----VQLGEKSRQVWLGVE 448
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.139 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,651,600
Number of extensions: 242180
Number of successful extensions: 788
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 772
Number of HSP's successfully gapped: 8
Length of query: 399
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 298
Effective length of database: 8,337,553
Effective search space: 2484590794
Effective search space used: 2484590794
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 113 (48.1 bits)