Os07g0240300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0240300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.24 | 0.542 | 10.3 | -1.31 | 1.7 | -0.787 | -0.113 | -0.0685 | -0.444 | 15.2 | 49.88 | 4060 | -- | -- |
| 133.23 | 0.538 | 10.3 | -1.31 | 1.7 | -0.811 | -0.112 | -- | -0.445 | 15.2 | 49.77 | 4039 | -- | -- |
| 133.27 | 0.538 | 10.3 | -1.31 | 1.7 | -0.788 | -- | -0.0632 | -0.445 | 15.2 | 49.7 | 4039 | -- | -- |
| 133.27 | 0.538 | 10.3 | -1.31 | 1.7 | -0.807 | -- | -- | -0.445 | 15.2 | 49.65 | 4039 | -- | -- |
| 293.3 | 0.798 | 10.3 | -1.12 | -- | -1.59 | -- | 1.42 | -0.554 | -- | 49.99 | 4039 | -- | -- |
| 144.94 | 0.564 | 10.3 | -1.62 | 1.74 | -- | 0.0527 | -- | -0.366 | 15.1 | -- | -- | -- | -- |
| 144.95 | 0.564 | 10.3 | -1.62 | 1.74 | -- | -- | -- | -0.366 | 15.1 | -- | -- | -- | -- |
| 295.08 | 0.8 | 10.3 | -1.22 | -- | -1.14 | -- | -- | -0.505 | -- | 49 | 4039 | -- | -- |
| 170.29 | 0.608 | 10.3 | -- | 1.69 | -1.4 | -- | -- | -0.398 | 15.3 | 49 | 4208 | -- | -- |
| 318.29 | 0.834 | 10.3 | -1.69 | -- | -- | -- | -- | -0.412 | -- | -- | -- | -- | -- |
| 213.92 | 0.684 | 10.3 | -- | 1.78 | -- | -- | -- | -0.186 | 15.1 | -- | -- | -- | -- |
| 329.29 | 0.845 | 10.3 | -- | -- | -1.7 | -- | -- | -0.463 | -- | 49 | 4073 | -- | -- |
| 393.81 | 0.926 | 10.3 | -- | -- | -- | -- | -- | -0.224 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 122.22 | wind | 3 | 14400 | > th | dose independent | rect. | 2 | 2 |
| 2 | 122.35 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 43 | 127.22 | wind | 9 | 14400 | < th | dose independent | rect. | 3 | 11 |
| 47 | 127.42 | wind | 9 | 14400 | < th | dose independent | sin | 6 | NA |
| 62 | 127.69 | wind | 5 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 64 | 127.74 | wind | 9 | 14400 | < th | dose independent | rect. | 19 | 19 |
| 75 | 127.98 | wind | 1 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 81 | 128.10 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 87 | 128.20 | wind | 7 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 106 | 128.42 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 123 | 128.48 | wind | 9 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 128 | 128.56 | wind | 5 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 141 | 128.74 | humidity | 80 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 144 | 128.77 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 158 | 128.87 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 18 |
| 173 | 128.96 | wind | 3 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 174 | 128.98 | humidity | 80 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 175 | 128.98 | humidity | 80 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 179 | 128.99 | wind | 7 | 14400 | > th | dose dependent | rect. | 10 | 4 |
| 197 | 129.09 | wind | 7 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 203 | 129.13 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 209 | 129.16 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 213 | 129.18 | wind | 9 | 14400 | > th | dose independent | sin | 6 | NA |
| 256 | 129.38 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 273 | 129.45 | wind | 3 | 14400 | < th | dose independent | sin | 8 | NA |
| 277 | 129.46 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 294 | 129.47 | wind | 9 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 299 | 129.48 | wind | 1 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 312 | 129.54 | wind | 3 | 14400 | > th | dose independent | sin | 8 | NA |
| 323 | 129.57 | wind | 9 | 14400 | < th | dose dependent | rect. | 1 | 12 |
| 388 | 129.74 | wind | 7 | 14400 | > th | dose dependent | sin | 4 | NA |
| 405 | 129.79 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 10 |
| 427 | 129.87 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 12 |
| 429 | 129.87 | wind | 1 | 14400 | < th | dose dependent | rect. | 8 | 2 |
| 432 | 129.88 | humidity | 80 | 1440 | < th | dose independent | rect. | 2 | 11 |
| 441 | 129.89 | wind | 9 | 14400 | > th | dose independent | rect. | 23 | 16 |
| 465 | 129.93 | temperature | 30 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 472 | 129.95 | radiation | 30 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 477 | 129.95 | temperature | 30 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 491 | 129.98 | temperature | 30 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 500 | 129.99 | temperature | 30 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 560 | 130.14 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 10 |
| 616 | 130.25 | wind | 1 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 636 | 130.28 | radiation | 30 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 652 | 130.33 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 685 | 130.42 | wind | 9 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 715 | 130.50 | humidity | 80 | 1440 | < th | dose independent | sin | 5 | NA |
| 718 | 130.50 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 11 |
| 768 | 130.58 | humidity | 80 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 807 | 130.66 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 5 |
| 815 | 130.67 | humidity | 50 | 4320 | < th | dose independent | rect. | 15 | 20 |
| 818 | 130.68 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 22 |
| 837 | 130.72 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 15 |
| 840 | 130.72 | wind | 1 | 14400 | > th | dose dependent | sin | 6 | NA |
| 858 | 130.75 | wind | 9 | 14400 | > th | dose independent | rect. | 23 | 19 |
| 863 | 130.76 | humidity | 50 | 4320 | < th | dose independent | sin | 11 | NA |
| 877 | 130.78 | wind | 9 | 14400 | < th | dose independent | no | NA | NA |
| 937 | 130.87 | temperature | 30 | 43200 | > th | dose dependent | rect. | 18 | 1 |