Os01g0957200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0957200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.85 | 0.531 | 8.2 | 3.25 | 0.633 | -0.984 | -0.353 | 1.74 | 0.00983 | 22.7 | 25.3 | 257 | -- | -- |
| 131.71 | 0.535 | 8.17 | 3.54 | 0.632 | -1.11 | -0.226 | -- | 0.0739 | 22.6 | 24.76 | 295 | -- | -- |
| 128.28 | 0.528 | 8.2 | 3.26 | 0.625 | -1 | -- | 1.7 | 0.000235 | 23 | 25.66 | 268 | -- | -- |
| 131.79 | 0.535 | 8.17 | 3.53 | 0.618 | -1.17 | -- | -- | 0.078 | 22.7 | 24.6 | 301 | -- | -- |
| 142.82 | 0.557 | 8.2 | 3.17 | -- | -1.19 | -- | 1.65 | -0.0487 | -- | 27.06 | 606 | -- | -- |
| 150.54 | 0.575 | 8.12 | 3.82 | 0.619 | -- | -0.449 | -- | 0.3 | 21.6 | -- | -- | -- | -- |
| 151.19 | 0.576 | 8.12 | 3.83 | 0.619 | -- | -- | -- | 0.3 | 21.9 | -- | -- | -- | -- |
| 145.3 | 0.561 | 8.17 | 3.47 | -- | -1.31 | -- | -- | 0.00885 | -- | 26.6 | 661 | -- | -- |
| 210.59 | 0.676 | 8.41 | -- | 0.58 | -2.92 | -- | -- | -0.997 | 21.6 | 35.7 | 47520 | -- | -- |
| 174.11 | 0.617 | 8.1 | 3.84 | -- | -- | -- | -- | 0.3 | -- | -- | -- | -- | -- |
| 538.44 | 1.09 | 8.22 | -- | 0.635 | -- | -- | -- | -0.127 | 22.3 | -- | -- | -- | -- |
| 211.59 | 0.677 | 8.37 | -- | -- | -3.08 | -- | -- | -0.888 | -- | 22.48 | 47520 | -- | -- |
| 563.03 | 1.11 | 8.2 | -- | -- | -- | -- | -- | -0.126 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.62 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 3 | 16 |
| 3 | 122.19 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 3 | 14 |
| 8 | 122.97 | atmosphere | 1005 | 10 | > th | dose dependent | sin | 4 | NA |
| 17 | 123.76 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 17 |
| 52 | 124.58 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 15 |
| 55 | 124.60 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 1 | 18 |
| 83 | 124.96 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 2 | 9 |
| 91 | 125.06 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 3 | 9 |
| 135 | 125.67 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 23 | 9 |
| 139 | 125.73 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 3 | 5 |
| 141 | 125.75 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 5 | 3 |
| 144 | 125.78 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 6 | 10 |
| 160 | 125.92 | temperature | 25 | 90 | < th | dose dependent | sin | 6 | NA |
| 229 | 126.52 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 4 | 12 |
| 233 | 126.54 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 17 |
| 286 | 126.84 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 6 | 15 |
| 350 | 127.17 | atmosphere | 1010 | 10 | < th | dose dependent | sin | 0 | NA |
| 398 | 127.36 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 1 | 11 |
| 489 | 127.79 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 2 |
| 538 | 127.96 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 548 | 127.98 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 649 | 128.36 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 22 |
| 671 | 128.44 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 4 | 17 |
| 712 | 128.58 | temperature | 15 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 913 | 129.12 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 938 | 129.19 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 947 | 129.22 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 3 | 21 |
| 995 | 129.35 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 1 | 23 |