BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0806400 Os01g0806400|Os01g0806400
(272 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0806400 Protein of unknown function DUF617, plant fami... 441 e-124
Os01g0268700 186 1e-47
Os08g0171800 Protein of unknown function DUF617, plant fami... 160 7e-40
Os05g0577100 Protein of unknown function DUF617, plant fami... 156 2e-38
Os01g0642600 Protein of unknown function DUF617, plant fami... 150 1e-36
Os08g0476600 Protein of unknown function DUF617, plant fami... 147 8e-36
Os04g0638800 Protein of unknown function DUF617, plant fami... 147 9e-36
Os02g0709600 Protein of unknown function DUF617, plant fami... 144 6e-35
Os09g0463600 Protein of unknown function DUF617, plant fami... 137 1e-32
Os05g0280150 117 1e-26
Os03g0733266 83 2e-16
>Os01g0806400 Protein of unknown function DUF617, plant family protein
Length = 272
Score = 441 bits (1133), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/251 (92%), Positives = 232/251 (92%)
Query: 22 DQLPPPSPHTPRPAITLTAPPSKKKXXXXXXXXXXXXXXXXXXXFRSLPILAPACRFHGA 81
DQLPPPSPHTPRPAITLTAPPSKKK FRSLPILAPACRFHGA
Sbjct: 22 DQLPPPSPHTPRPAITLTAPPSKKKRRGGAAARSLRAIRAVRALFRSLPILAPACRFHGA 81
Query: 82 IRAPGGASRAHDGHVSGASRTTGTLFGYRKARVTLAVQETPGSVPILLLELAMQTGRFMQ 141
IRAPGGASRAHDGHVSGASRTTGTLFGYRKARVTLAVQETPGSVPILLLELAMQTGRFMQ
Sbjct: 82 IRAPGGASRAHDGHVSGASRTTGTLFGYRKARVTLAVQETPGSVPILLLELAMQTGRFMQ 141
Query: 142 EMGAEHLRVALECEKKPPGAGAGIGRTRLLDEPLWTAYVNGRKIGYAMRREPTEGDLTVM 201
EMGAEHLRVALECEKKPPGAGAGIGRTRLLDEPLWTAYVNGRKIGYAMRREPTEGDLTVM
Sbjct: 142 EMGAEHLRVALECEKKPPGAGAGIGRTRLLDEPLWTAYVNGRKIGYAMRREPTEGDLTVM 201
Query: 202 QLLRTVSVGAGVLPTDVMGGDAGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNPDGNN 261
QLLRTVSVGAGVLPTDVMGGDAGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNPDGNN
Sbjct: 202 QLLRTVSVGAGVLPTDVMGGDAGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNPDGNN 261
Query: 262 GPELSIFFIRI 272
GPELSIFFIRI
Sbjct: 262 GPELSIFFIRI 272
>Os01g0268700
Length = 543
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 145/221 (65%), Gaps = 18/221 (8%)
Query: 66 FRSLPIL-APACRF-----HGAIRAPGGASRAHDGHVSGASRTTGTLFGYRKARVTLAVQ 119
FRS PIL AP+CR H GGA A H G++RTTGTL+G+R+AR+T+A
Sbjct: 325 FRSFPILPAPSCRGLPSLPHLPGLHHGGAGGAVRNHFHGSTRTTGTLYGHRRARITIAFH 384
Query: 120 ETPGSVPILLLELAMQTGRFMQEMGAE-HLRVALECEK-------KPPGAGAGIGRTRLL 171
++PGS P LLL++A+ T +F+Q++ A +RV LEC+K G + RLL
Sbjct: 385 DSPGSPPALLLDIAVPTAKFIQDVSAAGMVRVTLECDKQQHQPPPHAHPPGDPLPPRRLL 444
Query: 172 DEPLWTAYVNGRKIGYAMRREPTEGDLTVMQLLRTVSVGAGVLPTDVMGGDAGAEVQDAG 231
DEP+W+A VNG +GYA RRE TE D VM+LL +S+GAGVLP + DA D G
Sbjct: 445 DEPVWSAEVNGESVGYAARREATEADERVMRLLHAMSMGAGVLP--AVAADAPTSAAD-G 501
Query: 232 DLAYMRARFDRVVGSRDSESFYMLNPDGN-NGPELSIFFIR 271
++ YMRA FDRVVGS+D+E++YM NP+G GPEL+IFFIR
Sbjct: 502 EVTYMRAHFDRVVGSKDAETYYMHNPEGCATGPELTIFFIR 542
>Os08g0171800 Protein of unknown function DUF617, plant family protein
Length = 315
Score = 160 bits (406), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 116/185 (62%), Gaps = 14/185 (7%)
Query: 101 RTTGTLFGYRKARVTLAVQETPGSVPILLLELAMQTGRFMQEMGA-EHLRVALECEKKPP 159
R TGTLFG+RK RV LA+QETP +P L++ELA+QT ++E+ R+ LE E++ P
Sbjct: 132 RVTGTLFGHRKGRVALALQETPRCLPTLVIELAIQTNALLRELANPAGARIVLETERRAP 191
Query: 160 GAGAGIGRTR----LLDEPLWTAYVNGRKIGYAMRREPTEGDLTVMQLLRTVSVGAGVLP 215
A G+ R LLD WT + NGRK G A+RRE T+ DL V++ LR VS+GAGVLP
Sbjct: 192 STDAAAGKHRRAPPLLDVAAWTMFCNGRKTGLAVRREATDDDLAVLETLRPVSMGAGVLP 251
Query: 216 TDVMGG-------DAGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNPD-GNNGPELSI 267
+ GA D ++AYMR FD VGSRDSES YM+ P G GPEL+I
Sbjct: 252 ASNRSSSSSSQSPEKGAAAAD-DEVAYMRGCFDHFVGSRDSESLYMIAPQGGGTGPELAI 310
Query: 268 FFIRI 272
FF+R+
Sbjct: 311 FFVRL 315
>Os05g0577100 Protein of unknown function DUF617, plant family protein
Length = 297
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 115/186 (61%), Gaps = 20/186 (10%)
Query: 100 SRTTGTLFGYRKARVTLAVQETPGSVPILLLELAMQTGRFMQEMGAEHLRVALECEKKPP 159
+R TGTL+G+R+ V LA Q P + P LLLELA T ++EM + +R+ALECE+
Sbjct: 119 ARLTGTLYGHRRGHVHLAFQLDPRACPALLLELAAPTAALVREMASGLVRIALECERAKG 178
Query: 160 GAGAGI-----GRTRLLDEPLWTAYVNGRKIGYAMRREPTEGDLTVMQLLRTVSVGAGVL 214
G + G RLL+E +W AY NG+ GYA+RRE D V++ L VS+GAGV+
Sbjct: 179 GPAPALPTATGGGKRLLEETVWRAYCNGKSCGYAVRRECGAADWRVLRALEPVSMGAGVI 238
Query: 215 PTDVMGGDAGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNPD--------GNNGPELS 266
P GG GD+ YMRARF+RVVGSRDSE+FYM+NPD + GPELS
Sbjct: 239 PAASCGG-------GEGDVMYMRARFERVVGSRDSEAFYMMNPDSTSTSSNSNSGGPELS 291
Query: 267 IFFIRI 272
++ +R+
Sbjct: 292 VYLLRV 297
>Os01g0642600 Protein of unknown function DUF617, plant family protein
Length = 303
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 116/199 (58%), Gaps = 34/199 (17%)
Query: 100 SRTTGTLFGYRKARVTLAVQETPGSVPILLLELAMQTGRFMQEMGAEHLRVALECEKKPP 159
+R TGTL+G+R+ V LA Q P + P LLLELA T ++EM + +R+ALECE+
Sbjct: 113 ARLTGTLYGHRRGHVHLAFQVDPRACPALLLELAAPTASLVREMASGLVRIALECERAKG 172
Query: 160 GA-------------------GAGIGRTRLLDEPLWTAYVNGRKIGYAMRREPTEGDLTV 200
G + G +L++E +W AY NGR GYA+RRE D V
Sbjct: 173 GGACAFPTAAAAPSSSSSSSSSSSAGGRKLVEETVWRAYCNGRSCGYAVRRECGAADWRV 232
Query: 201 MQLLRTVSVGAGVLPTDVMGGDAGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNPD-- 258
++ L VS+GAGV+P GG+ GD+ YMRARF+RVVGSRDSE+FYM+NPD
Sbjct: 233 LRALEPVSMGAGVIPAACGGGE--------GDVMYMRARFERVVGSRDSEAFYMMNPDCG 284
Query: 259 -----GNNGPELSIFFIRI 272
N GPELS++ +R+
Sbjct: 285 GSGSNNNGGPELSVYLLRV 303
>Os08g0476600 Protein of unknown function DUF617, plant family protein
Length = 1589
Score = 147 bits (371), Expect = 8e-36, Method: Composition-based stats.
Identities = 91/223 (40%), Positives = 128/223 (57%), Gaps = 33/223 (14%)
Query: 66 FRSLPILAPACRFHGAI-RAPGGASRAHDGHVSGASRTTGTLFGYRKARVTLAVQETPGS 124
F+ LP+L C+ + R GG + + T TLFG+R+ R++LA+ E +
Sbjct: 46 FKLLPMLTTGCKMAALLGRHSGGRA----APLLADHAPTVTLFGHRRGRLSLAIHEDTRA 101
Query: 125 VPILLLELAMQTGRFMQEMGAEHLRVALECEKKPPGAGAGIGRTRLLDEPLWTAYVNGRK 184
P L+EL M +EM +++ALE + + R RLL+E +W + NGRK
Sbjct: 102 PPAFLIELPMLASAMHREMATGTVKLALESDTRS-------ARRRLLEEYVWAVFCNGRK 154
Query: 185 IGYAMRR-EPTEGDLTVMQLLRTVSVGAGVLP---TDVMGGDAGAEVQDAGDLAYMRARF 240
GYA+RR + ++ D V++LLR VS+GAGVLP D GG AG + G+L YMRAR
Sbjct: 155 AGYAIRRKDASDDDRHVLRLLRGVSMGAGVLPPPPADRRGG-AGPD----GELTYMRARV 209
Query: 241 DRVVGSRDSESFYMLNPD--GNNG----------PELSIFFIR 271
+RVVGS+DSE+FYM+NPD +NG PELSIF +R
Sbjct: 210 ERVVGSKDSEAFYMINPDDGSDNGGAAGRDRECAPELSIFLVR 252
>Os04g0638800 Protein of unknown function DUF617, plant family protein
Length = 301
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 139/242 (57%), Gaps = 47/242 (19%)
Query: 67 RSLPILAPACRFHGAIRAPGGASR-AHDGHVSGAS--------------------RTTGT 105
RSLP+L P C G ++ G A R A +S ++ R TGT
Sbjct: 71 RSLPVLTPGC---GRLQPAGAACRIAAPSRLSPSASLMSKLVASASTGAAGASRRRMTGT 127
Query: 106 LFGYRKARVTLAVQETPGSVPILLLELAMQTGRFMQEMGAEH-LRVALECEKKPPGAGAG 164
LFGYR AR+ L++Q+ P P L++ELA+ T ++++G R+ LE EK+ G G
Sbjct: 128 LFGYRDARIALSLQDNPRCQPTLVVELALPTHALLRDLGTTAGARIVLESEKRAADGGDG 187
Query: 165 IG------RTR------LLDEPLWTAYVNGRKIGYAMRREPTEGDLTVMQLLRTVSVGAG 212
G R R +L+E +WT NG+K+GYA+RR+PT+ D+ V++ L VS+G G
Sbjct: 188 AGAGASSRREREQQDGWVLEESMWTMSCNGKKVGYAVRRDPTDDDIAVLETLWAVSMGGG 247
Query: 213 VLP--TDVMGGDAGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNPDGNNGPELSIFFI 270
VLP +D+ G D G++AYMR F+ ++GSR+SES YM++P G + PEL++FF+
Sbjct: 248 VLPGISDMDGKD--------GEMAYMRGSFEHIIGSRNSESLYMISPHGGDCPELAVFFV 299
Query: 271 RI 272
R+
Sbjct: 300 RL 301
>Os02g0709600 Protein of unknown function DUF617, plant family protein
Length = 247
Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 95/140 (67%), Gaps = 6/140 (4%)
Query: 133 AMQTGRFMQEMGAEHLRVALECEKKPPGAGAGIGRTRLLDEPLWTAYVNGRKIGYAMRRE 192
A TG ++EM + +R+ALECEK+P G R LL+EP W AY NGRK G+A+RRE
Sbjct: 114 AYSTGALVREMSSGLVRLALECEKQPINPGEK--RRALLEEPTWRAYCNGRKCGFAVRRE 171
Query: 193 PTEGDLTVMQLLRTVSVGAGVLPTDVMGGDAGAEVQDAGDLAYMRARFDRVVGSRDSESF 252
+ V+ + VSVGAGVLP D A E GDL YMRARF+RVVGSRDSE+F
Sbjct: 172 CGADEWRVLGAVEPVSVGAGVLPDDAAAAAAAEE----GDLMYMRARFERVVGSRDSEAF 227
Query: 253 YMLNPDGNNGPELSIFFIRI 272
YM+NPDG+ GPELSI+ +R+
Sbjct: 228 YMMNPDGSGGPELSIYLLRV 247
>Os09g0463600 Protein of unknown function DUF617, plant family protein
Length = 244
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 125/218 (57%), Gaps = 26/218 (11%)
Query: 66 FRSLPILAPACRFHGAIRAPGGASRAHDGHVSGASRTTGTLFGYRKARVTLAVQETPGSV 125
F+ +P+L C+ + H+ + TT TLFG+R+ RV+LA+ E +
Sbjct: 41 FKLMPMLTSGCKMVALLGR-------HNRALLADHATTVTLFGHRRGRVSLAIHEDTRAP 93
Query: 126 PILLLELAMQTGRFMQEMGAEHLRVALECEKKPPGAGAGIGRTRLLDEPLWTAYVNGRKI 185
P+ L+EL M T +E+ + +++ALE + + R RL++E +W Y NGRK
Sbjct: 94 PVFLIELPMLTSALHKEISSGVVKLALESDTRS-------ARRRLVEEYVWAVYCNGRKA 146
Query: 186 GYAMRR-EPTEGDLTVMQLLRTVSVGAGVLPTDVMGGDAGAEVQDAGDLAYMRARFDRVV 244
GY++RR E ++ + V++LLR VS+GAGVLP + G G+L Y+RAR +RVV
Sbjct: 147 GYSIRRKEASDDERHVLRLLRGVSMGAGVLPA-APEKEGGVPAGPDGELTYVRARVERVV 205
Query: 245 GSRDSESFYMLNPD----------GNNGPELSIFFIRI 272
GS+DSE+FYM+NP+ + PELSIF +R+
Sbjct: 206 GSKDSEAFYMINPNEGGVGGDSAGDGSAPELSIFLVRM 243
>Os05g0280150
Length = 412
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 96/184 (52%), Gaps = 25/184 (13%)
Query: 104 GTLFGYRKARVTLAVQETPGSVPILLLELAMQTGRFMQEMGAEHLRVALECEKKP----- 158
GT+FG R VT VQ P L EL++ EMG+ LR+ALEC
Sbjct: 85 GTIFGRRSGHVTFCVQRDAAMPPPFLFELSVPMLSLAAEMGSGLLRIALECHHSSGKVVV 144
Query: 159 --------PGAGAGIGRTRLLDEPLWTAYVNGRKIGYAMRREPTEGDLTVMQLLRTVSVG 210
AG G G +R +W A NGR +GYA+RR PT+ D V++ +R + G
Sbjct: 145 GAADGDTINNAGTGGGGSR----SVWKASCNGRDVGYAVRRRPTDQDCRVLESMRMTTTG 200
Query: 211 AGVLPTDVMGGDAGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNP---DGNNGPELSI 267
GVLP+ D G GD+ YMRA ++RVVGS+D+ S++++ P G+ ELS+
Sbjct: 201 VGVLPSTGFSEDGG-----GGDVLYMRATYERVVGSKDAVSYHLITPGTASGSPQQELSV 255
Query: 268 FFIR 271
F +R
Sbjct: 256 FLLR 259
>Os03g0733266
Length = 231
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 95/184 (51%), Gaps = 36/184 (19%)
Query: 104 GTLF-----GYRKARVTLAVQE---TPGSVPILLLELAMQTGRFMQEMGAEHLRVALECE 155
GTLF G R+ R+ L + +P +L L + G ++ A RV LEC+
Sbjct: 69 GTLFLPSTGGDRRVRLFLHEHDPSPSPDENHQAILVLDLPPGLSGADIAAAG-RVVLECQ 127
Query: 156 KKPPGAGAGIGRTRLLDEPLWTAYVNGRKIGYAMRR-EPTEGDLTVMQLLRTVSVGAGVL 214
++ G LL+ W Y NGR++G+A RR E ++ + V++ L V+ GAG L
Sbjct: 128 RQWNNGGGA-----LLESAKWLVYCNGRRVGFAARRGEASDAEGWVLEKLWAVTAGAGRL 182
Query: 215 PTDVMGGDAGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNP------DGNNGPELSIF 268
P G AG E YMR RF+R V S D+ESF++++P +GN+G LSIF
Sbjct: 183 P-----GGAGVE--------YMRGRFERTVASSDAESFHLVDPIGWLGFNGNDG--LSIF 227
Query: 269 FIRI 272
F RI
Sbjct: 228 FHRI 231
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.137 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,766,727
Number of extensions: 439682
Number of successful extensions: 2162
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 2136
Number of HSP's successfully gapped: 11
Length of query: 272
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 173
Effective length of database: 11,866,615
Effective search space: 2052924395
Effective search space used: 2052924395
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 155 (64.3 bits)