BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0763600 Os01g0763600|AK066596
(391 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0763600 Glycerophosphoryl diester phosphodiesterase fa... 787 0.0
Os03g0603600 Glycerophosphoryl diester phosphodiesterase fa... 548 e-156
Os07g0602800 Glycerophosphoryl diester phosphodiesterase fa... 366 e-101
Os04g0472300 Glycerophosphoryl diester phosphodiesterase fa... 92 7e-19
Os12g0456700 Glycerophosphoryl diester phosphodiesterase fa... 89 5e-18
Os08g0503200 Glycerophosphoryl diester phosphodiesterase fa... 84 2e-16
>Os01g0763600 Glycerophosphoryl diester phosphodiesterase family protein
Length = 391
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/391 (96%), Positives = 379/391 (96%)
Query: 1 MRPSLRTIYFLLLLLPHVVFSRPLFPLPSKSNGIEKRPLQTFRPYNIAHRGSNGEIPEET 60
MRPSLRTIYFLLLLLPHVVFSRPLFPLPSKSNGIEKRPLQTFRPYNIAHRGSNGEIPEET
Sbjct: 1 MRPSLRTIYFLLLLLPHVVFSRPLFPLPSKSNGIEKRPLQTFRPYNIAHRGSNGEIPEET 60
Query: 61 AAAYLRAIEEGADFIETDILASKDGALICFHDVTLDATTDVASRKEFSNRRRTYEVEWFN 120
AAAYLRAIEEGADFIETDILASKDGALICFHDVTLDATTDVASRKEFSNRRRTYEVEWFN
Sbjct: 61 AAAYLRAIEEGADFIETDILASKDGALICFHDVTLDATTDVASRKEFSNRRRTYEVEWFN 120
Query: 121 ATGWFVVDFTLEELKTLKVNQRYPFRDQQYNGKXXXXXXXXXXXXALDASRTVGIYPEMK 180
ATGWFVVDFTLEELKTLKVNQRYPFRDQQYNGK ALDASRTVGIYPEMK
Sbjct: 121 ATGWFVVDFTLEELKTLKVNQRYPFRDQQYNGKFSIITFEEFISIALDASRTVGIYPEMK 180
Query: 181 DPVFINKHVKWDGGKKFEDKFVDTLLKYGYKGQYMSENWLKQPLFIQSFAPTSLVHASKL 240
DPVFINKHVKWDGGKKFEDKFVDTLLKYGYKGQYMSENWLKQPLFIQSFAPTSLVHASKL
Sbjct: 181 DPVFINKHVKWDGGKKFEDKFVDTLLKYGYKGQYMSENWLKQPLFIQSFAPTSLVHASKL 240
Query: 241 TDSPKIFLIDDFSVRTQDTNQSYWDITSDDYLAYISNYVVGLGPWKDTVVPAAKNYTMAP 300
TDSPKIFLIDDFSVRTQDTNQSYWDITSDDYLAYISNYVVGLGPWKDTVVPAAKNYTMAP
Sbjct: 241 TDSPKIFLIDDFSVRTQDTNQSYWDITSDDYLAYISNYVVGLGPWKDTVVPAAKNYTMAP 300
Query: 301 TDLVARAHAHNLQVHPYTYRNENQFLHLNFHQDPYAEYDFWINSMGVDGLFTDFTGSLHR 360
TDLVARAHAHNLQVHPYTYRNENQFLHLNFHQDPYAEYDFWINSMGVDGLFTDFTGSLHR
Sbjct: 301 TDLVARAHAHNLQVHPYTYRNENQFLHLNFHQDPYAEYDFWINSMGVDGLFTDFTGSLHR 360
Query: 361 YQELVAPHAKDETANSLLVKIAQMISQYEGF 391
YQELVAPHAKDETANSLLVKIAQMISQYEGF
Sbjct: 361 YQELVAPHAKDETANSLLVKIAQMISQYEGF 391
>Os03g0603600 Glycerophosphoryl diester phosphodiesterase family protein
Length = 391
Score = 548 bits (1412), Expect = e-156, Method: Compositional matrix adjust.
Identities = 261/376 (69%), Positives = 306/376 (81%), Gaps = 1/376 (0%)
Query: 11 LLLLLPHVVFSRPLFPLPSKSNGIEKRPLQTFRPYNIAHRGSNGEIPEETAAAYLRAIEE 70
+L+LL + P S+ + ++PLQTFRPYNIAHRGSNGEIPEET AAYLRAIEE
Sbjct: 11 VLVLLSGESNANPAASQQSQLDVNHRKPLQTFRPYNIAHRGSNGEIPEETTAAYLRAIEE 70
Query: 71 GADFIETDILASKDGALICFHDVTLDATTDVASRKEFSNRRRTYEVEWFNATGWFVVDFT 130
GADFIE+DILA+KDG LICFHDV LDATTD+A+R EF+NR+RTYEVE N TGWFVVDFT
Sbjct: 71 GADFIESDILATKDGHLICFHDVILDATTDIANRTEFANRKRTYEVERQNVTGWFVVDFT 130
Query: 131 LEELKTLKVNQRYPFRDQQYNGKXXXXXXXXXXXXALDASRTVGIYPEMKDPVFINKHVK 190
LEELK+L+V QRY FRDQQYNGK AL A R VGIYPE+K+P+FIN+HVK
Sbjct: 131 LEELKSLRVKQRYNFRDQQYNGKYQIITFDEYILIALYADRVVGIYPELKNPIFINEHVK 190
Query: 191 WDGGKKFEDKFVDTLLKYGYKGQYMSENWLKQPLFIQSFAPTSLVHASKLTDSPKIFLID 250
W GKKFEDKFV TLLKYGYKG+YMSE+WLKQPLFIQSFAP+SL++ S +T+SPKIFLID
Sbjct: 191 WSDGKKFEDKFVQTLLKYGYKGEYMSEDWLKQPLFIQSFAPSSLIYMSNMTNSPKIFLID 250
Query: 251 DFSVRTQDTNQSYWDITSDDYLAYISNYVVGLGPWKDTVVPAAKNYTMAPTDLVARAHAH 310
D +VRTQDTNQSY++ITSD YLA+I Y+VG+GPWKDT+VP NY PTDLVARAHA
Sbjct: 251 DTTVRTQDTNQSYYEITSDAYLAFIRKYIVGIGPWKDTIVPPINNYLGPPTDLVARAHAL 310
Query: 311 NLQVHPYTYRNENQFLHLNFHQDPYAEYDFWINSMGVDGLFTDFTGSLHRYQELVAPHAK 370
NLQVHPYT+RNEN FLH +FHQDPY EY++W+ +GVDGLFTDFTG+LHR+QE P+ K
Sbjct: 311 NLQVHPYTFRNENMFLHFDFHQDPYLEYEYWLGEIGVDGLFTDFTGTLHRFQECTTPYPK 370
Query: 371 DE-TANSLLVKIAQMI 385
+E A +LL KI M+
Sbjct: 371 NEKNAEALLQKINYML 386
>Os07g0602800 Glycerophosphoryl diester phosphodiesterase family protein
Length = 336
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/331 (55%), Positives = 223/331 (67%), Gaps = 49/331 (14%)
Query: 36 KRPLQTFRPYNIAHRGSNGEIPEETAAAYLRAIEEGADFIETDILASKDGALICFHDVTL 95
K PLQT RP+NIAHRGSNGE+PEETAAAY+RAI+EGADFIE D+ A+KDG L+CFHD TL
Sbjct: 44 KAPLQTSRPFNIAHRGSNGELPEETAAAYMRAIDEGADFIEADVTATKDGHLVCFHDTTL 103
Query: 96 DATTDVASRKEFSNRRRTYEVEWFNATGWFVVDFTLEELKTLKVNQRYPFRDQQYNGKXX 155
DATTDVA EF++RRRT EV+W N TG+F+ DFTL ELKTL+ QRY FRD+ YNG
Sbjct: 104 DATTDVADHPEFASRRRTLEVQWTNVTGFFITDFTLAELKTLRSKQRYAFRDRSYNGGES 163
Query: 156 XXXXXXXX---XXALDASRTVGIYPEMKDPVFINKHVKWDGGKKFEDKFVDTLLKYGYKG 212
A ASR VGIYPE+K+PVF+N+ V+W GKKFEDKFV L + GY G
Sbjct: 164 SRIITFDEFIDTAAGAASRVVGIYPEIKNPVFVNRQVRWRDGKKFEDKFVAALKRRGYGG 223
Query: 213 QYMSENWLKQPLFIQSFAPTSLVHASKLTDSPKIFLIDDFSVRTQDTNQSYWDITSDDYL 272
+YMS W +P+FIQSFAPTSLV+A+ LTDSP + L+DD +VRT+DT+QSY ++TSD++L
Sbjct: 224 RYMSPAWAARPVFIQSFAPTSLVYAAGLTDSPMVLLVDDTTVRTEDTSQSYDEVTSDEHL 283
Query: 273 AYISNYVVGLGPWKDTVVPAAKNYTMAPTDLVARAHAHNLQVHPYTYRNENQFLHLNFHQ 332
Y+ YVVG+GPWKDT
Sbjct: 284 DYMREYVVGVGPWKDT-------------------------------------------- 299
Query: 333 DPYAEYDFWINSMGVDGLFTDFTGSLHRYQE 363
DPYAEYD+WIN +G LFTDF SL RYQE
Sbjct: 300 DPYAEYDYWINDVG--DLFTDFPASLRRYQE 328
>Os04g0472300 Glycerophosphoryl diester phosphodiesterase family protein
Length = 740
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 154/361 (42%), Gaps = 36/361 (9%)
Query: 25 FPL-PSKSNG----IEKRPLQTFRPYNIAHRGSNGEIPEETAAAYLRAIEEGADFIETDI 79
FP+ PS++ G ++K +P I+H G++G+ P T AY +A+++GAD I+ +
Sbjct: 328 FPVTPSEAIGCFTNLKKSKTDHGKPLIISHNGASGDYPACTDLAYQKAVDDGADVIDCPV 387
Query: 80 LASKDGALICFHDVTLDATTDVASRKEFSNRRRTYEVEWFNATGWFVVDFTLEEL-KTLK 138
+KDG IC + L T VA + S ++E + G F + T +++ K L+
Sbjct: 388 QLTKDGIPICMSSINLMDDTTVAKSQFASQTAVIKDIE--SVLGVFTFNLTWDDIVKNLR 445
Query: 139 VNQRYPF------RDQQYNGKXXXXXXXXXXXXALDASRTVGIYPEMKDPVFINKHVKWD 192
PF R+ +Y D + GI ++ F+ + + +D
Sbjct: 446 PKISTPFSSFKLDRNPRYRNAGNFMRLSDFLDFTKDKDLS-GIMISVEHAAFVAEELGFD 504
Query: 193 GGKKFEDKFVDTLLKYGYKGQYMSENWLKQPLFIQSFAPTSLVHASKLTDSPKIFLIDDF 252
D + TL GY Q Q + IQS + LV + T +++I++
Sbjct: 505 ----MVDSVIKTLDAAGYSNQ------TAQKVMIQSSNSSVLVKFKQQTKYDLVYMINE- 553
Query: 253 SVRTQDTNQSYWDITSDDYLAYISNYVVGLGPWKDTVVPAAKNYTMAPTDLVARAHAHNL 312
+D S LA I + + +++ P +++T T+LV L
Sbjct: 554 --EVKDAAPS--------SLAAIKKFADAVSVEGNSIFPENRHFTTYQTNLVESLQNAGL 603
Query: 313 QVHPYTYRNENQFLHLNFHQDPYAEYDFWINSMGVDGLFTDFTGSLHRYQELVAPHAKDE 372
V+ YT NE +F D A+ + ++ GV+G+ TDF + RY+ H +
Sbjct: 604 PVYVYTLMNEFASQPYDFFSDATAQINAYVQGAGVNGVITDFPATARRYKLNTCMHMGNN 663
Query: 373 T 373
T
Sbjct: 664 T 664
>Os12g0456700 Glycerophosphoryl diester phosphodiesterase family protein
Length = 456
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 144/335 (42%), Gaps = 22/335 (6%)
Query: 47 IAHRGSNGEIPEETAAAYLRAIEEGADFIETDILASKDGALICFHDVTLDATTDVASRKE 106
I+H G++G+ P+ T AY +A+ +GAD I+ I +KDG IC + L +TDV + K
Sbjct: 53 ISHNGASGDYPDCTDLAYEKAVGDGADVIDCSIEMTKDGIPICMSSINLYDSTDVQNSKF 112
Query: 107 FSNRRRTYEVEWFNATGWFVVDFTLEELKTLKVNQRYPF----RDQQYNGKXXXXXXXXX 162
S E++ G F + T EE+ TL+ +P+ R+ +Y +
Sbjct: 113 SSLASVVPEIQ--TKPGIFTFNLTWEEISTLRPKITHPYHDFVRNPRYANQGKFFKLSDF 170
Query: 163 XXXALDASRTVGIYPEMKDPVFINKHVKWDGGKKFEDKFVDTLLKYGYKGQYMSENWLKQ 222
A D + GI MK+ F+ K + +D D L GY + K+
Sbjct: 171 LTYAKDKDLS-GIMIIMKNAAFMAKSLGFD----VVDLVTTALSNAGYDNMDPTTKNNKE 225
Query: 223 PLFIQSFAPTSLVHASKLTDSPKIFLIDDFSVRTQDTNQSYWDITSDDYLAYISNYVVGL 282
+ IQS LV + K L+ ++ D SD +A I + +
Sbjct: 226 -IMIQSKDSAVLVKLKQRLTQCK--LVYSLPLKVGD--------VSDSCVADIKKFADAV 274
Query: 283 GPWKDTVVPAAKNYTMAPTDLVARAHAHNLQVHPYTYRNENQFLHLNFHQDPYAEYDFWI 342
+++V +K + + + +V + L V+ +RNE ++F D E + ++
Sbjct: 275 IVDRESVFAESKGFIIRKSKVVEDVQSAGLAVYVEVFRNEYVSPPVDFFADGTVEINNYV 334
Query: 343 NSMGVDGLFTDFTGSLHRYQELVAPHAKDETANSL 377
+ VDG TDF ++ RY+ D T+ S+
Sbjct: 335 QLVHVDGFITDFPKTVRRYKMNTCTRQGDGTSTSM 369
>Os08g0503200 Glycerophosphoryl diester phosphodiesterase family protein
Length = 778
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 141/332 (42%), Gaps = 39/332 (11%)
Query: 44 PYNIAHRGSNGEIPEETAAAYLRAIEEGADFIETDILASKDGALICFHDVTLDATTDVAS 103
P I+H G++G+ P+ T AY +A+++GAD I+ I + DG +C + L TT+V
Sbjct: 370 PLIISHNGASGDYPDCTDLAYQKAVDDGADVIDCSIQMTSDGVPVCMSSINLFETTNV-Q 428
Query: 104 RKEFSNRRRTYEVEWFNATGWFVVDFTLEELKTLKVNQR--------YPFRDQQYNGKXX 155
R FSNR ++ + G F + T ++ + + + Y R+ +
Sbjct: 429 RTPFSNRASIFK-DIQPTPGIFTFNLTWADISSSDLRPKISSPESIYYLVRNPVHKNAGN 487
Query: 156 XXXXXXXXXXALDASRTVGIYPEMKDPVFINKHVKWDGGKKFEDKFVDTLLKYGYKGQYM 215
A D + GI +K+ VF+ + +D VD++ K Y
Sbjct: 488 FFRLSDFLTFAKDKDLS-GIMIIIKNAVFMANSLGFD--------VVDSVTKALSDAGYN 538
Query: 216 SENWLKQPLFIQSFAPTSLVHASKLTDSPKIF-----LIDDFSVRTQDTNQSYWDITSDD 270
++ + + IQS LV+ +L K+ I D S + + + D D
Sbjct: 539 NQTTKAKEVMIQSEDSAVLVNLKQLETKYKLVYTLPSTIGDASASSLVDVKKFADAVIVD 598
Query: 271 YLAYISNYVVGLGPWKDTVVPAAKNYTMAPTDLVARAHAHNLQVHPYTYRNENQFLHLNF 330
++++ P ++ + M T+LV + L ++ +RNE +F
Sbjct: 599 ---------------RESIFPESQGFIMKETNLVKDLRSAGLAIYAQVFRNEFVSPPWDF 643
Query: 331 HQDPYAEYDFWINSMGVDGLFTDFTGSLHRYQ 362
D E + ++ S+ +DG+ TDF ++ RY+
Sbjct: 644 FSDVTVEINSYVQSVNIDGIITDFPKTVRRYK 675
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 145/323 (44%), Gaps = 29/323 (8%)
Query: 37 RPLQTFRPYNIAHRGSNGEIPEETAAAYLRAIEE--GADFIETDILASKDGALICFHDVT 94
+ L P IA G +G P+ + AY+ A+ G + ++ +KDG IC D+
Sbjct: 47 KTLSGNAPIVIAEGGFSGVFPDSSKNAYVFALSSTSGDTVLWCNVQLTKDGVGICLRDLL 106
Query: 95 LDATTDVASRKEFSNRRRTYEVEWFNATGWFVVDFTLEELKTLKVNQRYPFRDQQYNGKX 154
+D T ++ + + ++ Y V GWF +D+T+ L+++ + Q R +++
Sbjct: 107 MDNCTSIS--QAYRAGKKAYLVNGEEKKGWFPIDYTMSSLQSVILTQAIWSRTDKFD--- 161
Query: 155 XXXXXXXXXXXALDASRTVGIYPEMKDPVFINKHVKWDGGKKFEDKFVDTLLKYGYKGQY 214
+D ++ ++ ++ +F +H G K++ ++ K G QY
Sbjct: 162 FAFLPILPVTNVIDLAKPSSVWLNIEHDIFYRQH-----GLNMT-KYILSIPK-GGSVQY 214
Query: 215 MSENWLKQPLFIQSFAPTSLVHASKLTDSPKIFLIDDFSVRTQDTNQSYWDITSDDYLAY 274
+S L F+QS + + +KL +F D + +NQ+Y + S+ L +
Sbjct: 215 ISSPELG---FLQSIS-GRVNRKTKL-----VFRFLDATSSDPSSNQTYGSLLSN--LTF 263
Query: 275 ISNYVVGLGPWKDTVVPAAKNYTMAPTDLVAR-AHAHNLQVHPYTYRNENQFLHLNFHQD 333
I G+ K+ + P N + P + R AH+ L+++ + N+ + + N+ D
Sbjct: 264 IKTVASGIMVPKEYIWPVTTNNYIQPAKSIVRDAHSAGLEIYASDFAND-RIIPYNYSYD 322
Query: 334 PYAEYDFWINS--MGVDGLFTDF 354
P EY ++ S VDG+ ++F
Sbjct: 323 PLEEYLHFVGSDNFSVDGVLSEF 345
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,999,380
Number of extensions: 543543
Number of successful extensions: 1032
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1026
Number of HSP's successfully gapped: 7
Length of query: 391
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 288
Effective length of database: 11,657,759
Effective search space: 3357434592
Effective search space used: 3357434592
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)