Os04g0472300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycerophosphoryl diester phosphodiesterase family protein.
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Os04g0472300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycerophosphoryl diester phosphodiesterase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 822.55 | 1.35 | 5.5 | -1.25 | 2.93 | -1.87 | -0.0562 | 1.23 | -0.793 | 11.6 | 70.2 | 20 | 5.68 | 14.1 |
| 822.31 | 1.35 | 5.49 | -1.2 | 2.93 | -1.87 | 0.235 | -- | -0.77 | 11.6 | 69.53 | 13 | 5.68 | 14.1 |
| 818.76 | 1.34 | 5.5 | -1.24 | 2.93 | -1.9 | -- | 1.29 | -0.788 | 11.6 | 70.2 | 20 | 5.68 | 14.1 |
| 822.33 | 1.34 | 5.49 | -1.19 | 2.94 | -1.86 | -- | -- | -0.764 | 11.6 | 68.78 | 16 | 5.68 | 14.1 |
| 1298.48 | 1.69 | 5.57 | -1.23 | -- | -1.41 | -- | 1.13 | -0.877 | -- | 81 | 9 | 5.67 | 14.8 |
| 927.19 | 1.43 | 5.49 | -1.11 | 2.58 | -- | 0.398 | -- | -0.708 | 12.1 | -- | -- | -- | -- |
| 927.88 | 1.43 | 5.49 | -1.09 | 2.58 | -- | -- | -- | -0.706 | 12.1 | -- | -- | -- | -- |
| 1276.57 | 1.67 | 5.58 | -1.17 | -- | -1.54 | -- | -- | -0.881 | -- | 80.41 | 9 | 5.68 | 16.8 |
| 858.87 | 1.37 | 5.46 | -- | 2.98 | -1.78 | -- | -- | -0.621 | 11.6 | 67.01 | 12 | 5.68 | 14.2 |
| 1346.18 | 1.71 | 5.54 | -1.18 | -- | -- | -- | -- | -0.743 | -- | -- | -- | -- | -- |
| 959.46 | 1.45 | 5.46 | -- | 2.59 | -- | -- | -- | -0.584 | 12.1 | -- | -- | -- | -- |
| 1177.38 | 1.6 | 5.57 | -- | -- | -2.01 | -- | -- | -0.855 | -- | 73 | 2 | 5.8 | 19.2 |
| 1382.66 | 1.74 | 5.51 | -- | -- | -- | -- | -- | -0.612 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 845.92 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 14 |
| 2 | 847.37 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 12 |
| 9 | 852.18 | temperature | 25.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 10 | 852.79 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 5 | 8 |
| 11 | 853.18 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 5 | 6 |
| 30 | 856.60 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 12 |
| 33 | 857.37 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 46 | 859.54 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 48 | 859.68 | temperature | 25.0 | 270 | > th | dose independent | sin | 13 | NA |
| 57 | 860.71 | temperature | 25.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 58 | 861.06 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 6 |
| 69 | 862.17 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 17 |
| 90 | 863.52 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 8 |
| 95 | 863.58 | radiation | 20.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 100 | 863.94 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 22 | 2 |
| 101 | 863.98 | temperature | 25.0 | 270 | < th | dose independent | sin | 15 | NA |
| 114 | 865.00 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 2 |
| 121 | 865.43 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 123 | 865.60 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 21 | 4 |
| 126 | 865.68 | humidity | 80.0 | 90 | < th | dose independent | rect. | 6 | 10 |
| 131 | 866.09 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 142 | 866.54 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 145 | 866.61 | humidity | 80.0 | 10 | < th | dose independent | rect. | 7 | 9 |
| 160 | 867.13 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 180 | 867.81 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 191 | 868.10 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 200 | 868.43 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 12 |
| 228 | 869.23 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 12 |
| 242 | 869.47 | radiation | 20.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 257 | 869.73 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 14 |
| 266 | 869.95 | humidity | 70.0 | 30 | > th | dose dependent | sin | 0 | NA |
| 269 | 869.97 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 292 | 870.57 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 298 | 870.75 | radiation | 20.0 | 30 | < th | dose independent | rect. | 5 | 17 |
| 311 | 871.22 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 331 | 871.62 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 14 |
| 336 | 871.81 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 14 |
| 367 | 872.31 | radiation | 10.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 370 | 872.35 | radiation | 10.0 | 10 | > th | dose independent | rect. | 7 | 10 |
| 375 | 872.41 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 5 | 17 |
| 399 | 872.80 | radiation | 20.0 | 30 | < th | dose independent | rect. | 5 | 21 |
| 409 | 872.92 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 5 | 11 |
| 411 | 872.94 | radiation | 20.0 | 30 | < th | dose independent | rect. | 5 | 15 |
| 430 | 873.23 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 476 | 873.70 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 24 | 16 |
| 477 | 873.71 | temperature | 25.0 | 720 | > th | dose dependent | sin | 13 | NA |
| 494 | 874.01 | temperature | 25.0 | 720 | > th | dose independent | rect. | 13 | 11 |
| 499 | 874.11 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 556 | 874.66 | radiation | 20.0 | 30 | > th | dose independent | no | NA | NA |
| 680 | 874.81 | humidity | 80.0 | 90 | > th | dose independent | sin | 2 | NA |
| 692 | 874.91 | temperature | 25.0 | 270 | > th | dose independent | rect. | 18 | 20 |
| 746 | 875.39 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 7 | 9 |
| 748 | 875.40 | temperature | 25.0 | 720 | > th | dose independent | rect. | 11 | 14 |
| 758 | 875.49 | humidity | 80.0 | 10 | > th | dose independent | sin | 1 | NA |
| 763 | 875.58 | temperature | 25.0 | 720 | < th | dose independent | rect. | 11 | 13 |
| 764 | 875.59 | radiation | 10.0 | 10 | > th | dose independent | sin | 22 | NA |
| 785 | 875.65 | radiation | 20.0 | 30 | < th | dose independent | rect. | 5 | 19 |
| 802 | 875.83 | radiation | 1.0 | 270 | < th | dose independent | sin | 1 | NA |
| 820 | 876.05 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 18 |
| 834 | 876.19 | temperature | 25.0 | 720 | < th | dose independent | rect. | 13 | 11 |
| 838 | 876.21 | radiation | 30.0 | 30 | < th | dose dependent | sin | 23 | NA |
| 849 | 876.31 | radiation | 1.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 856 | 876.34 | radiation | 1.0 | 270 | > th | dose independent | sin | 1 | NA |
| 857 | 876.35 | temperature | 25.0 | 270 | > th | dose independent | rect. | 10 | 16 |
| 872 | 876.49 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 879 | 876.51 | humidity | 80.0 | 90 | < th | dose independent | sin | 2 | NA |
| 887 | 876.58 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 22 |
| 973 | 876.63 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 22 |
| 975 | 876.63 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 22 |